RNA–Protein interactions for RNA: ENST00000362003.9

PCGF3-201, Transcript of polycomb group ring finger 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PCGF3, Length 5,685 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-201ENST00000362003 MBIPQ9NS73 344 aa20.19■□□□□ 0.82
PCGF3-201ENST00000362003 PPIP5K1Q6PFW1 1433 aa20.19■□□□□ 0.82
PCGF3-201ENST00000362003 UHRF1BP1LA0JNW5 1464 aa20.19■□□□□ 0.82
PCGF3-201ENST00000362003 RPGRQ92834 1020 aaKnown RBP20.18■□□□□ 0.82
PCGF3-201ENST00000362003 MCM4P33991 863 aa20.18■□□□□ 0.82
PCGF3-201ENST00000362003 HMGN5P82970 282 aaKnown RBP20.18■□□□□ 0.82
PCGF3-201ENST00000362003 CCDC8Q9H0W5 538 aaPredicted RBP20.18■□□□□ 0.82
PCGF3-201ENST00000362003 EVI5LQ96CN4 794 aa20.17■□□□□ 0.82
PCGF3-201ENST00000362003 A0A087WZG4 1122 aa20.17■□□□□ 0.82
PCGF3-201ENST00000362003 CCDC196A0A1B0GTZ2 297 aa20.17■□□□□ 0.82
PCGF3-201ENST00000362003 RIMS2Q9UQ26 1411 aa20.17■□□□□ 0.82
PCGF3-201ENST00000362003 PDCL3Q9H2J4 239 aa20.17■□□□□ 0.82
PCGF3-201ENST00000362003 PIBF1Q8WXW3 757 aa20.17■□□□□ 0.82
PCGF3-201ENST00000362003 MKNK2Q9HBH9 465 aa20.17■□□□□ 0.82
PCGF3-201ENST00000362003 MINDY4BA8MYZ0 360 aa20.16■□□□□ 0.82
PCGF3-201ENST00000362003 SLF2Q8IX21 1173 aa20.16■□□□□ 0.82
PCGF3-201ENST00000362003 UPF3BQ9BZI7 483 aaKnown RBP20.16■□□□□ 0.82
PCGF3-201ENST00000362003 CWC25Q9NXE8 425 aaPredicted RBP20.16■□□□□ 0.82
PCGF3-201ENST00000362003 SSBP05455 408 aaKnown RBP eCLIP20.16■□□□□ 0.82
PCGF3-201ENST00000362003 CRACR2BQ8N4Y2 399 aaPredicted RBP20.16■□□□□ 0.82
PCGF3-201ENST00000362003 TTF1Q15361 905 aaPredicted RBP20.15■□□□□ 0.82
PCGF3-201ENST00000362003 MSH6P52701 1360 aa20.15■□□□□ 0.82
PCGF3-201ENST00000362003 TCOF1Q13428 1488 aaKnown RBP20.15■□□□□ 0.82
PCGF3-201ENST00000362003 MAP3K11Q16584 847 aa20.15■□□□□ 0.82
PCGF3-201ENST00000362003 KRI1Q8N9T8 703 aaKnown RBP20.15■□□□□ 0.82
PCGF3-201ENST00000362003 RNF41Q9H4P4 317 aaPredicted RBP20.15■□□□□ 0.82
PCGF3-201ENST00000362003 CADPS2Q86UW7 1296 aa20.15■□□□□ 0.82
PCGF3-201ENST00000362003 ERLIN2O94905 339 aa20.14■□□□□ 0.82
PCGF3-201ENST00000362003 MAP7D2Q96T17 732 aa20.14■□□□□ 0.82
PCGF3-201ENST00000362003 PHAXQ9H814 394 aaKnown RBP20.14■□□□□ 0.82
PCGF3-201ENST00000362003 ZNF213O14771 459 aa20.14■□□□□ 0.81
PCGF3-201ENST00000362003 PRAG1Q86YV5 1406 aa20.14■□□□□ 0.81
PCGF3-201ENST00000362003 WDR62O43379 1518 aa20.14■□□□□ 0.81
PCGF3-201ENST00000362003 NOM1Q5C9Z4 860 aaKnown RBP20.13■□□□□ 0.81
PCGF3-201ENST00000362003 TNIP1Q15025 636 aa20.13■□□□□ 0.81
PCGF3-201ENST00000362003 CCDC181Q5TID7 509 aa20.13■□□□□ 0.81
PCGF3-201ENST00000362003 ZBTB3Q9H5J0 574 aa20.13■□□□□ 0.81
PCGF3-201ENST00000362003 NGLY1Q96IV0 654 aa20.12■□□□□ 0.81
PCGF3-201ENST00000362003 SLC12A7Q9Y666 1083 aa20.12■□□□□ 0.81
PCGF3-201ENST00000362003 SNRPA1P09661 255 aaKnown RBP20.12■□□□□ 0.81
PCGF3-201ENST00000362003 CTCFLQ8NI51 663 aaPredicted RBP20.12■□□□□ 0.81
PCGF3-201ENST00000362003 ECHDC1Q9NTX5 307 aa20.11■□□□□ 0.81
PCGF3-201ENST00000362003 SSRP1Q08945 709 aaKnown RBP20.11■□□□□ 0.81
PCGF3-201ENST00000362003 MAPKBP1O60336 1514 aa20.11■□□□□ 0.81
PCGF3-201ENST00000362003 IQCA1Q86XH1 822 aa20.11■□□□□ 0.81
PCGF3-201ENST00000362003 CDC5LQ99459 802 aaKnown RBP20.11■□□□□ 0.81
PCGF3-201ENST00000362003 PPP1R42Q7Z4L9 355 aa20.11■□□□□ 0.81
PCGF3-201ENST00000362003 ZNF444Q8N0Y2 327 aaPredicted RBP20.11■□□□□ 0.81
PCGF3-201ENST00000362003 FAM83GA6ND36 823 aa20.1■□□□□ 0.81
PCGF3-201ENST00000362003 C8orf76Q96K31 380 aa20.1■□□□□ 0.81
PCGF3-201ENST00000362003 SHANK2Q9UPX8 1470 aa20.1■□□□□ 0.81
PCGF3-201ENST00000362003 KIF21AQ7Z4S6 1674 aa20.1■□□□□ 0.81
PCGF3-201ENST00000362003 GPTP24298 496 aa20.1■□□□□ 0.81
PCGF3-201ENST00000362003 SCAND2PQ9GZW5 306 aaPredicted RBP20.1■□□□□ 0.81
PCGF3-201ENST00000362003 LIMCH1Q9UPQ0 1083 aa20.1■□□□□ 0.81
PCGF3-201ENST00000362003 MATR3P43243 847 aaKnown RBP eCLIP20.09■□□□□ 0.815e-7■■■■■ 42.2
PCGF3-201ENST00000362003 PTPRKQ15262 1439 aa20.09■□□□□ 0.81
PCGF3-201ENST00000362003 ABCC10Q5T3U5 1492 aa20.09■□□□□ 0.81
PCGF3-201ENST00000362003 RANBP6O60518 1105 aaKnown RBP20.09■□□□□ 0.81
PCGF3-201ENST00000362003 ARHGAP45Q92619 1136 aa20.09■□□□□ 0.81
PCGF3-201ENST00000362003 IQCEQ6IPM2 695 aa20.08■□□□□ 0.81
PCGF3-201ENST00000362003 ABCC1P33527 1531 aa20.08■□□□□ 0.81
PCGF3-201ENST00000362003 GOLGA8AA7E2F4 631 aa20.08■□□□□ 0.81
PCGF3-201ENST00000362003 GOLGA8BA8MQT2 603 aa20.08■□□□□ 0.81
PCGF3-201ENST00000362003 CCDC183Q5T5S1 534 aa20.08■□□□□ 0.8
PCGF3-201ENST00000362003 CCDC112Q8NEF3 446 aa20.08■□□□□ 0.8
PCGF3-201ENST00000362003 CWC15Q9P013 229 aaKnown RBP20.07■□□□□ 0.8
PCGF3-201ENST00000362003 CAMK4Q16566 473 aa20.07■□□□□ 0.8
PCGF3-201ENST00000362003 BMP2KLQ5H9B9 411 aa20.07■□□□□ 0.8
PCGF3-201ENST00000362003 TTC22Q5TAA0 569 aa20.07■□□□□ 0.8
PCGF3-201ENST00000362003 SEPT11Q9NVA2 429 aaKnown RBP20.07■□□□□ 0.8
PCGF3-201ENST00000362003 BRPF3Q9ULD4 1205 aa20.07■□□□□ 0.8
PCGF3-201ENST00000362003 EIF5P55010 431 aaKnown RBP20.07■□□□□ 0.8
PCGF3-201ENST00000362003 CATIPQ7Z7H3 387 aa20.07■□□□□ 0.8
PCGF3-201ENST00000362003 FERMT3Q86UX7 667 aa20.06■□□□□ 0.8
PCGF3-201ENST00000362003 VSIG10Q8N0Z9 540 aa20.06■□□□□ 0.8
PCGF3-201ENST00000362003 ZNF397Q8NF99 534 aaPredicted RBP20.06■□□□□ 0.8
PCGF3-201ENST00000362003 SYCE3A1L190 88 aa20.06■□□□□ 0.8
PCGF3-201ENST00000362003 IFIT3O14879 490 aaKnown RBP20.06■□□□□ 0.8
PCGF3-201ENST00000362003 CCDC96Q2M329 555 aa20.06■□□□□ 0.8
PCGF3-201ENST00000362003 CUL5Q93034 780 aa20.06■□□□□ 0.8
PCGF3-201ENST00000362003 PI4KAP2A4QPH2 592 aa20.06■□□□□ 0.8
PCGF3-201ENST00000362003 GOLIM4O00461 696 aa20.06■□□□□ 0.8
PCGF3-201ENST00000362003 PI4KAP1Q8N8J0 262 aa20.06■□□□□ 0.8
PCGF3-201ENST00000362003 TSG101Q99816 390 aa20.05■□□□□ 0.8
PCGF3-201ENST00000362003 EHMT1Q9H9B1 1298 aa20.05■□□□□ 0.8
PCGF3-201ENST00000362003 ANO10Q9NW15 660 aa20.05■□□□□ 0.8
PCGF3-201ENST00000362003 TRAPPC8Q9Y2L5 1435 aa20.05■□□□□ 0.8
PCGF3-201ENST00000362003 PPP1R12BO60237 982 aaPredicted RBP20.05■□□□□ 0.8
PCGF3-201ENST00000362003 DDX46Q7L014 1031 aaKnown RBP20.05■□□□□ 0.8
PCGF3-201ENST00000362003 GOLGA6L10A6NI86 522 aa20.05■□□□□ 0.8
PCGF3-201ENST00000362003 ATP5J2-PTCD1G3V325 749 aa20.05■□□□□ 0.8
PCGF3-201ENST00000362003 SKIDA1Q1XH10 827 aa20.05■□□□□ 0.8
PCGF3-201ENST00000362003 SPTY2D1Q68D10 685 aaPredicted RBP20.05■□□□□ 0.8
PCGF3-201ENST00000362003 TMEM266Q2M3C6 531 aa20.04■□□□□ 0.8
PCGF3-201ENST00000362003 LDHAL6AQ6ZMR3 332 aa20.04■□□□□ 0.8
PCGF3-201ENST00000362003 TBC1D9Q6ZT07 1266 aa20.04■□□□□ 0.8
PCGF3-201ENST00000362003 HMG20BQ9P0W2 317 aa20.04■□□□□ 0.8
PCGF3-201ENST00000362003 FBXO3Q9UK99 471 aa20.04■□□□□ 0.8
PCGF3-201ENST00000362003 RAB34Q9BZG1 259 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms