RNA–Protein interactions for RNA: ENST00000361574.9

R3HDM4-201, Transcript of R3H domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene R3HDM4, Length 1,815 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-201ENST00000361574 RAPGEF4Q8WZA2 1011 aa28.36■■■□□ 2.13
R3HDM4-201ENST00000361574 K7ELQ4 463 aaPredicted RBP28.35■■■□□ 2.13
R3HDM4-201ENST00000361574 MTX1Q13505 466 aa28.35■■■□□ 2.13
R3HDM4-201ENST00000361574 HYPKQ9NX55 129 aa28.35■■■□□ 2.13
R3HDM4-201ENST00000361574 MEGF6O75095 1541 aa28.35■■■□□ 2.13
R3HDM4-201ENST00000361574 SPG7Q9UQ90 795 aa28.34■■■□□ 2.13
R3HDM4-201ENST00000361574 ERC2O15083 957 aa28.34■■■□□ 2.13
R3HDM4-201ENST00000361574 TATP17735 454 aaPredicted RBP28.34■■■□□ 2.13
R3HDM4-201ENST00000361574 PARP4Q9UKK3 1724 aaKnown RBP28.33■■■□□ 2.13
R3HDM4-201ENST00000361574 KSR2Q6VAB6 950 aa28.33■■■□□ 2.13
R3HDM4-201ENST00000361574 PPP1R42Q7Z4L9 355 aa28.33■■■□□ 2.13
R3HDM4-201ENST00000361574 HDAC5Q9UQL6 1122 aa28.32■■■□□ 2.12
R3HDM4-201ENST00000361574 HSP90AB1P08238 724 aaKnown RBP28.32■■■□□ 2.12
R3HDM4-201ENST00000361574 PHKG2P15735 406 aa28.32■■■□□ 2.12
R3HDM4-201ENST00000361574 SLC52A2Q9HAB3 445 aa28.32■■■□□ 2.12
R3HDM4-201ENST00000361574 C5P01031 1676 aa28.31■■■□□ 2.12
R3HDM4-201ENST00000361574 CD2BP2O95400 341 aaKnown RBP28.31■■■□□ 2.12
R3HDM4-201ENST00000361574 DDX21Q9NR30 783 aaKnown RBP eCLIP28.31■■■□□ 2.12
R3HDM4-201ENST00000361574 NBPF7P0C2Y1 421 aaPredicted RBP28.3■■■□□ 2.12
R3HDM4-201ENST00000361574 MCM4P33991 863 aa28.3■■■□□ 2.12
R3HDM4-201ENST00000361574 NLRP2Q9NX02 1062 aa28.3■■■□□ 2.12
R3HDM4-201ENST00000361574 HSP90AB4PQ58FF6 505 aa28.29■■■□□ 2.12
R3HDM4-201ENST00000361574 SPRYD3Q8NCJ5 442 aa28.29■■■□□ 2.12
R3HDM4-201ENST00000361574 UTYO14607 1347 aa28.29■■■□□ 2.12
R3HDM4-201ENST00000361574 EPB41L2O43491 1005 aaKnown RBP28.29■■■□□ 2.12
R3HDM4-201ENST00000361574 ZNF790Q6PG37 636 aa28.29■■■□□ 2.12
R3HDM4-201ENST00000361574 IFNL2Q8IZJ0 200 aa28.28■■■□□ 2.12
R3HDM4-201ENST00000361574 DDX17Q92841 729 aaKnown RBP28.28■■■□□ 2.12
R3HDM4-201ENST00000361574 KIF1BPQ96EK5 621 aa28.27■■■□□ 2.12
R3HDM4-201ENST00000361574 RBM42Q9BTD8 480 aaKnown RBP28.27■■■□□ 2.12
R3HDM4-201ENST00000361574 PROSER3Q2NL68 480 aa28.27■■■□□ 2.12
R3HDM4-201ENST00000361574 IL17RAQ96F46 866 aa28.27■■■□□ 2.12
R3HDM4-201ENST00000361574 MAP3K2Q9Y2U5 619 aa28.27■■■□□ 2.12
R3HDM4-201ENST00000361574 STRCQ7RTU9 1775 aa28.26■■■□□ 2.12
R3HDM4-201ENST00000361574 PLEKHG5O94827 1062 aa28.26■■■□□ 2.11
R3HDM4-201ENST00000361574 ANXA1P04083 346 aa28.26■■■□□ 2.11
R3HDM4-201ENST00000361574 PDIA6Q15084 440 aa28.26■■■□□ 2.11
R3HDM4-201ENST00000361574 RHPN1Q8TCX5 695 aa28.26■■■□□ 2.11
R3HDM4-201ENST00000361574 USP42Q9H9J4 1324 aaKnown RBP28.26■■■□□ 2.11
R3HDM4-201ENST00000361574 SRGAP3O43295 1099 aa28.25■■■□□ 2.11
R3HDM4-201ENST00000361574 DDX58O95786 925 aaKnown RBP28.25■■■□□ 2.11
R3HDM4-201ENST00000361574 DCAF5Q96JK2 942 aa28.25■■■□□ 2.11
R3HDM4-201ENST00000361574 SURF6O75683 361 aaKnown RBP28.25■■■□□ 2.11
R3HDM4-201ENST00000361574 LINS1Q8NG48 757 aa28.25■■■□□ 2.11
R3HDM4-201ENST00000361574 ESYT1Q9BSJ8 1104 aa28.24■■■□□ 2.11
R3HDM4-201ENST00000361574 RAB3GAP1Q15042 981 aa28.23■■■□□ 2.11
R3HDM4-201ENST00000361574 AK9Q5TCS8 1911 aa28.23■■■□□ 2.11
R3HDM4-201ENST00000361574 CHMLP26374 656 aa28.22■■■□□ 2.11
R3HDM4-201ENST00000361574 IL27Q8NEV9 243 aa28.22■■■□□ 2.11
R3HDM4-201ENST00000361574 BRINP3Q76B58 766 aa28.22■■■□□ 2.11
R3HDM4-201ENST00000361574 PRAMEF22A3QJZ6 481 aa28.21■■■□□ 2.11
R3HDM4-201ENST00000361574 BCL11AQ9H165 835 aa28.2■■■□□ 2.11
R3HDM4-201ENST00000361574 LAMB4A4D0S4 1761 aa28.2■■■□□ 2.11
R3HDM4-201ENST00000361574 GLI3P10071 1580 aa28.2■■■□□ 2.1
R3HDM4-201ENST00000361574 DDX11L8A8MPP1 907 aa28.2■■■□□ 2.1
R3HDM4-201ENST00000361574 CABLES1Q8TDN4 633 aa28.2■■■□□ 2.1
R3HDM4-201ENST00000361574 SOS2Q07890 1332 aaPredicted RBP28.19■■■□□ 2.1
R3HDM4-201ENST00000361574 CYP27B1O15528 508 aa28.19■■■□□ 2.1
R3HDM4-201ENST00000361574 CSB-PGBD3P0DP91 1061 aa28.19■■■□□ 2.1
R3HDM4-201ENST00000361574 PI4K2BQ8TCG2 481 aa28.19■■■□□ 2.1
R3HDM4-201ENST00000361574 HSPA2P54652 639 aa28.18■■■□□ 2.1
R3HDM4-201ENST00000361574 ANAPC15P60006 121 aa28.18■■■□□ 2.1
R3HDM4-201ENST00000361574 TSHZ3Q63HK5 1081 aa28.18■■■□□ 2.1
R3HDM4-201ENST00000361574 CLEC17AQ6ZS10 378 aa28.18■■■□□ 2.1
R3HDM4-201ENST00000361574 NFATC2IPQ8NCF5 419 aa28.18■■■□□ 2.1
R3HDM4-201ENST00000361574 C9orf78Q9NZ63 289 aaPredicted RBP28.18■■■□□ 2.1
R3HDM4-201ENST00000361574 ABCA3Q99758 1704 aa28.17■■■□□ 2.1
R3HDM4-201ENST00000361574 ST18O60284 1047 aa28.17■■■□□ 2.1
R3HDM4-201ENST00000361574 IL1RAPL2Q9NP60 686 aa28.17■■■□□ 2.1
R3HDM4-201ENST00000361574 TTC41PQ6P2S7 1318 aa28.17■■■□□ 2.1
R3HDM4-201ENST00000361574 GRM8O00222 908 aa28.16■■■□□ 2.1
R3HDM4-201ENST00000361574 CHRNA2Q15822 529 aa28.16■■■□□ 2.1
R3HDM4-201ENST00000361574 LARP1Q6PKG0 1096 aaKnown RBP28.16■■■□□ 2.1
R3HDM4-201ENST00000361574 ERC1Q8IUD2 1116 aa28.16■■■□□ 2.1
R3HDM4-201ENST00000361574 LRP10Q7Z4F1 713 aa28.15■■■□□ 2.1
R3HDM4-201ENST00000361574 HSP90AA1P07900 732 aaKnown RBP28.15■■■□□ 2.1
R3HDM4-201ENST00000361574 SNRPA1P09661 255 aaKnown RBP28.15■■■□□ 2.1
R3HDM4-201ENST00000361574 SLC39A6Q13433 755 aa28.15■■■□□ 2.1
R3HDM4-201ENST00000361574 TNPO1Q92973 898 aaKnown RBP28.15■■■□□ 2.1
R3HDM4-201ENST00000361574 ZNF496Q96IT1 587 aaPredicted RBP28.14■■■□□ 2.1
R3HDM4-201ENST00000361574 WDR17Q8IZU2 1322 aa28.13■■■□□ 2.09
R3HDM4-201ENST00000361574 TRIM6-TRIM34B2RNG4 842 aa28.13■■■□□ 2.09
R3HDM4-201ENST00000361574 PTMSP20962 102 aa28.13■■■□□ 2.09
R3HDM4-201ENST00000361574 COL15A1P39059 1388 aa28.13■■■□□ 2.09
R3HDM4-201ENST00000361574 MCCP23508 829 aa28.13■■■□□ 2.09
R3HDM4-201ENST00000361574 CWF19L2Q2TBE0 894 aaKnown RBP28.13■■■□□ 2.09
R3HDM4-201ENST00000361574 UNC5CLQ8IV45 518 aa28.13■■■□□ 2.09
R3HDM4-201ENST00000361574 GBP4Q96PP9 640 aa28.13■■■□□ 2.09
R3HDM4-201ENST00000361574 UBR2Q8IWV8 1755 aa28.12■■■□□ 2.09
R3HDM4-201ENST00000361574 NUTM1Q86Y26 1132 aa28.12■■■□□ 2.09
R3HDM4-201ENST00000361574 RILPL2Q969X0 211 aa28.12■■■□□ 2.09
R3HDM4-201ENST00000361574 FMNL2Q96PY5 1086 aa28.12■■■□□ 2.09
R3HDM4-201ENST00000361574 KAZALD1Q96I82 304 aa28.11■■■□□ 2.09
R3HDM4-201ENST00000361574 CWC22Q9HCG8 908 aaKnown RBP28.11■■■□□ 2.09
R3HDM4-201ENST00000361574 IGKV5-2P06315 115 aa28.11■■■□□ 2.09
R3HDM4-201ENST00000361574 METTL22Q9BUU2 404 aaPredicted RBP28.11■■■□□ 2.09
R3HDM4-201ENST00000361574 COL5A2P05997 1499 aaPredicted RBP28.11■■■□□ 2.09
R3HDM4-201ENST00000361574 PAPPAQ13219 1627 aa28.1■■■□□ 2.09
R3HDM4-201ENST00000361574 MCM2P49736 904 aa28.1■■■□□ 2.09
R3HDM4-201ENST00000361574 ERBB4Q15303 1308 aa28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms