RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 C8orf58Q8NAV2 365 aa18.73■□□□□ 0.59
CLSTN1-201ENST00000361311 ATP2B1P20020 1258 aa18.73■□□□□ 0.59
CLSTN1-201ENST00000361311 RDXP35241 583 aaKnown RBP18.72■□□□□ 0.59
CLSTN1-201ENST00000361311 EIF2AK4Q9P2K8 1649 aaKnown RBP18.72■□□□□ 0.59
CLSTN1-201ENST00000361311 SLU7O95391 586 aaKnown RBP18.72■□□□□ 0.59
CLSTN1-201ENST00000361311 RAPGEF3O95398 923 aa18.72■□□□□ 0.59
CLSTN1-201ENST00000361311 TMC6Q7Z403 805 aa18.72■□□□□ 0.59
CLSTN1-201ENST00000361311 PKP1Q13835 747 aa18.71■□□□□ 0.59
CLSTN1-201ENST00000361311 NECAB1Q8N987 351 aa18.71■□□□□ 0.59
CLSTN1-201ENST00000361311 ANKRD36BQ8N2N9 1353 aa18.71■□□□□ 0.59
CLSTN1-201ENST00000361311 URB2Q14146 1524 aaKnown RBP18.71■□□□□ 0.59
CLSTN1-201ENST00000361311 DNAJC25Q9H1X3 360 aa18.71■□□□□ 0.59
CLSTN1-201ENST00000361311 KDM5CP41229 1560 aa18.71■□□□□ 0.59
CLSTN1-201ENST00000361311 NLRP6P59044 892 aa18.71■□□□□ 0.59
CLSTN1-201ENST00000361311 A2MP01023 1474 aa18.71■□□□□ 0.59
CLSTN1-201ENST00000361311 OTUD7AQ8TE49 926 aaPredicted RBP18.7■□□□□ 0.58
CLSTN1-201ENST00000361311 C14orf93Q9H972 538 aaKnown RBP18.7■□□□□ 0.58
CLSTN1-201ENST00000361311 KDM6BO15054 1643 aa18.7■□□□□ 0.58
CLSTN1-201ENST00000361311 ZNF692Q9BU19 519 aaPredicted RBP18.7■□□□□ 0.58
CLSTN1-201ENST00000361311 RTEL1-TNFRSF6BF6WH68 1400 aa18.7■□□□□ 0.58
CLSTN1-201ENST00000361311 CEP85Q6P2H3 762 aa18.7■□□□□ 0.58
CLSTN1-201ENST00000361311 LUZP1Q86V48 1076 aa18.69■□□□□ 0.58
CLSTN1-201ENST00000361311 FSIP1Q8NA03 581 aa18.69■□□□□ 0.58
CLSTN1-201ENST00000361311 ZNF608Q9ULD9 1512 aaPredicted RBP18.69■□□□□ 0.58
CLSTN1-201ENST00000361311 NOS1P29475 1434 aa18.69■□□□□ 0.58
CLSTN1-201ENST00000361311 FBLN1P23142 703 aa18.69■□□□□ 0.58
CLSTN1-201ENST00000361311 GPT2Q8TD30 523 aa18.69■□□□□ 0.58
CLSTN1-201ENST00000361311 FYB1O15117 783 aa18.69■□□□□ 0.58
CLSTN1-201ENST00000361311 GADD45BO75293 160 aaPredicted RBP18.69■□□□□ 0.58
CLSTN1-201ENST00000361311 CD2BP2O95400 341 aaKnown RBP18.69■□□□□ 0.58
CLSTN1-201ENST00000361311 SYT1P21579 422 aa18.69■□□□□ 0.58
CLSTN1-201ENST00000361311 LMAN1P49257 510 aa18.69■□□□□ 0.58
CLSTN1-201ENST00000361311 TTC5Q8N0Z6 440 aa18.69■□□□□ 0.58
CLSTN1-201ENST00000361311 GABPB1Q06547 395 aaPredicted RBP18.68■□□□□ 0.58
CLSTN1-201ENST00000361311 NUTM2GQ5VZR2 741 aa18.68■□□□□ 0.58
CLSTN1-201ENST00000361311 SLC52A1Q9NWF4 448 aa18.68■□□□□ 0.58
CLSTN1-201ENST00000361311 ITSN2Q9NZM3 1697 aa18.68■□□□□ 0.58
CLSTN1-201ENST00000361311 TOP1P11387 765 aaKnown RBP18.68■□□□□ 0.58
CLSTN1-201ENST00000361311 NME9Q86XW9 330 aa18.68■□□□□ 0.58
CLSTN1-201ENST00000361311 CASQ1P31415 396 aa18.68■□□□□ 0.58
CLSTN1-201ENST00000361311 FLIIQ13045 1269 aa18.68■□□□□ 0.58
CLSTN1-201ENST00000361311 TXNDC2Q86VQ3 553 aa18.68■□□□□ 0.58
CLSTN1-201ENST00000361311 IBTKQ9P2D0 1353 aaPredicted RBP18.68■□□□□ 0.58
CLSTN1-201ENST00000361311 JAKMIP3Q5VZ66 844 aa18.67■□□□□ 0.58
CLSTN1-201ENST00000361311 TXLNBQ8N3L3 684 aa18.67■□□□□ 0.58
CLSTN1-201ENST00000361311 DACH1Q9UI36 760 aa18.67■□□□□ 0.58
CLSTN1-201ENST00000361311 ARHGAP29Q52LW3 1261 aa18.67■□□□□ 0.58
CLSTN1-201ENST00000361311 USP8P40818 1118 aa18.67■□□□□ 0.58
CLSTN1-201ENST00000361311 DMTNQ08495 405 aa18.67■□□□□ 0.58
CLSTN1-201ENST00000361311 GBP3Q9H0R5 595 aa18.67■□□□□ 0.58
CLSTN1-201ENST00000361311 PATL2C9JE40 543 aaKnown RBP18.66■□□□□ 0.58
CLSTN1-201ENST00000361311 GUCY1B3Q02153 619 aa18.66■□□□□ 0.58
CLSTN1-201ENST00000361311 BOLA2Q9H3K6 86 aa18.66■□□□□ 0.58
CLSTN1-201ENST00000361311 AK2P54819 239 aa18.66■□□□□ 0.58
CLSTN1-201ENST00000361311 NAP1L1P55209 391 aaKnown RBP18.66■□□□□ 0.58
CLSTN1-201ENST00000361311 CCAR1Q8IX12 1150 aaKnown RBP18.66■□□□□ 0.58
CLSTN1-201ENST00000361311 CCDC47Q96A33 483 aaKnown RBP18.66■□□□□ 0.58
CLSTN1-201ENST00000361311 BIN1O00499 593 aa18.66■□□□□ 0.58
CLSTN1-201ENST00000361311 KIAA0754O94854 1291 aa18.66■□□□□ 0.58
CLSTN1-201ENST00000361311 BRD1O95696 1058 aa18.66■□□□□ 0.58
CLSTN1-201ENST00000361311 CCDC150Q8NCX0 1101 aa18.66■□□□□ 0.58
CLSTN1-201ENST00000361311 WDR62O43379 1518 aa18.65■□□□□ 0.58
CLSTN1-201ENST00000361311 CHAMP1Q96JM3 812 aa18.65■□□□□ 0.58
CLSTN1-201ENST00000361311 DNAI1Q9UI46 699 aa18.65■□□□□ 0.58
CLSTN1-201ENST00000361311 RAPGEF6Q8TEU7 1601 aa18.65■□□□□ 0.58
CLSTN1-201ENST00000361311 CHMLP26374 656 aa18.65■□□□□ 0.58
CLSTN1-201ENST00000361311 NPHP3Q7Z494 1330 aa18.65■□□□□ 0.58
CLSTN1-201ENST00000361311 ERICH2A1L162 156 aa18.64■□□□□ 0.57
CLSTN1-201ENST00000361311 FAM193AP78312 1265 aa18.64■□□□□ 0.57
CLSTN1-201ENST00000361311 ECHDC1Q9NTX5 307 aa18.64■□□□□ 0.57
CLSTN1-201ENST00000361311 CCDC69A6NI79 296 aa18.64■□□□□ 0.57
CLSTN1-201ENST00000361311 TRIM35Q9UPQ4 493 aa18.64■□□□□ 0.57
CLSTN1-201ENST00000361311 TMX1Q9H3N1 280 aa18.64■□□□□ 0.57
CLSTN1-201ENST00000361311 KIF4BQ2VIQ3 1234 aa18.63■□□□□ 0.57
CLSTN1-201ENST00000361311 PPP1R42Q7Z4L9 355 aa18.63■□□□□ 0.57
CLSTN1-201ENST00000361311 TCEANC2Q96MN5 208 aa18.63■□□□□ 0.57
CLSTN1-201ENST00000361311 CCDC61Q9Y6R9 512 aa18.63■□□□□ 0.57
CLSTN1-201ENST00000361311 SLC3A2P08195 630 aaKnown RBP18.63■□□□□ 0.57
CLSTN1-201ENST00000361311 ADGRL2O95490 1459 aa18.63■□□□□ 0.57
CLSTN1-201ENST00000361311 MAGI3Q5TCQ9 1506 aa18.63■□□□□ 0.57
CLSTN1-201ENST00000361311 STK11IPQ8N1F8 1099 aa18.63■□□□□ 0.57
CLSTN1-201ENST00000361311 GRIN2AQ12879 1464 aa18.63■□□□□ 0.57
CLSTN1-201ENST00000361311 EPB41L2O43491 1005 aaKnown RBP18.62■□□□□ 0.57
CLSTN1-201ENST00000361311 UTP14CQ5TAP6 766 aaKnown RBP18.62■□□□□ 0.57
CLSTN1-201ENST00000361311 RHPN1Q8TCX5 695 aa18.62■□□□□ 0.57
CLSTN1-201ENST00000361311 ZFP91Q96JP5 570 aaPredicted RBP18.62■□□□□ 0.57
CLSTN1-201ENST00000361311 ARFGAP3Q9NP61 516 aa18.62■□□□□ 0.57
CLSTN1-201ENST00000361311 CDR1P51861 262 aa18.62■□□□□ 0.57
CLSTN1-201ENST00000361311 GNG11P61952 73 aa18.62■□□□□ 0.57
CLSTN1-201ENST00000361311 TAF7Q15545 349 aaPredicted RBP18.62■□□□□ 0.57
CLSTN1-201ENST00000361311 ERO1AQ96HE7 468 aa18.62■□□□□ 0.57
CLSTN1-201ENST00000361311 GSPT1P15170 499 aaKnown RBP18.61■□□□□ 0.57
CLSTN1-201ENST00000361311 GTF3C6Q969F1 213 aa18.61■□□□□ 0.57
CLSTN1-201ENST00000361311 MAGI2Q86UL8 1455 aa18.61■□□□□ 0.57
CLSTN1-201ENST00000361311 KIF5CO60282 957 aa18.61■□□□□ 0.57
CLSTN1-201ENST00000361311 EVI5LQ96CN4 794 aa18.61■□□□□ 0.57
CLSTN1-201ENST00000361311 CCDC8Q9H0W5 538 aaPredicted RBP18.61■□□□□ 0.57
CLSTN1-201ENST00000361311 WAPLQ7Z5K2 1190 aa18.61■□□□□ 0.57
CLSTN1-201ENST00000361311 CRACR2AQ9BSW2 395 aa18.61■□□□□ 0.57
CLSTN1-201ENST00000361311 ZSWIM4Q9H7M6 989 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms