RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 CHPF2Q9P2E5 772 aa26.57■■□□□ 1.84
MAP1LC3A-201ENST00000360668 ZBTB7BO15156 539 aaPredicted RBP26.56■■□□□ 1.84
MAP1LC3A-201ENST00000360668 GLI3P10071 1580 aa26.56■■□□□ 1.84
MAP1LC3A-201ENST00000360668 PCDHB15Q9Y5E8 787 aa26.55■■□□□ 1.84
MAP1LC3A-201ENST00000360668 PRAMEF22A3QJZ6 481 aa26.54■■□□□ 1.84
MAP1LC3A-201ENST00000360668 FKBP5Q13451 457 aaPredicted RBP26.54■■□□□ 1.84
MAP1LC3A-201ENST00000360668 UPF1Q92900 1129 aaKnown RBP eCLIP26.54■■□□□ 1.84
MAP1LC3A-201ENST00000360668 ITGB4P16144 1822 aa26.54■■□□□ 1.84
MAP1LC3A-201ENST00000360668 KCPQ6ZWJ8 1503 aa26.54■■□□□ 1.84
MAP1LC3A-201ENST00000360668 ONECUT3O60422 494 aaPredicted RBP26.53■■□□□ 1.84
MAP1LC3A-201ENST00000360668 TSHZ2Q9NRE2 1034 aa26.53■■□□□ 1.84
MAP1LC3A-201ENST00000360668 PXDNLA1KZ92 1463 aa26.53■■□□□ 1.84
MAP1LC3A-201ENST00000360668 LAMB4A4D0S4 1761 aa26.52■■□□□ 1.84
MAP1LC3A-201ENST00000360668 CCT4P50991 539 aaKnown RBP26.52■■□□□ 1.84
MAP1LC3A-201ENST00000360668 PHAXQ9H814 394 aaKnown RBP26.52■■□□□ 1.84
MAP1LC3A-201ENST00000360668 DDX21Q9NR30 783 aaKnown RBP eCLIP26.51■■□□□ 1.83
MAP1LC3A-201ENST00000360668 HYPKQ9NX55 129 aa26.51■■□□□ 1.83
MAP1LC3A-201ENST00000360668 N4BP2Q86UW6 1770 aaPredicted RBP26.51■■□□□ 1.83
MAP1LC3A-201ENST00000360668 PIGBQ92521 554 aa26.5■■□□□ 1.83
MAP1LC3A-201ENST00000360668 F6X3S4 739 aa26.5■■□□□ 1.83
MAP1LC3A-201ENST00000360668 IGHDP01880 384 aa26.5■■□□□ 1.83
MAP1LC3A-201ENST00000360668 BCL9O00512 1426 aa26.5■■□□□ 1.83
MAP1LC3A-201ENST00000360668 FAM98CQ17RN3 349 aaKnown RBP26.49■■□□□ 1.83
MAP1LC3A-201ENST00000360668 SEPT12Q8IYM1 358 aa26.49■■□□□ 1.83
MAP1LC3A-201ENST00000360668 RWDD1Q9H446 243 aaPredicted RBP26.49■■□□□ 1.83
MAP1LC3A-201ENST00000360668 DOT1LQ8TEK3 1739 aa26.48■■□□□ 1.83
MAP1LC3A-201ENST00000360668 PDIA6Q15084 440 aa26.47■■□□□ 1.83
MAP1LC3A-201ENST00000360668 SLC4A10Q6U841 1118 aa26.47■■□□□ 1.83
MAP1LC3A-201ENST00000360668 MARCH10Q8NA82 808 aaPredicted RBP26.47■■□□□ 1.83
MAP1LC3A-201ENST00000360668 USP16Q9Y5T5 823 aa26.47■■□□□ 1.83
MAP1LC3A-201ENST00000360668 HDAC1Q13547 482 aaPredicted RBP26.46■■□□□ 1.83
MAP1LC3A-201ENST00000360668 PROSER3Q2NL68 480 aa26.46■■□□□ 1.83
MAP1LC3A-201ENST00000360668 ANXA1P04083 346 aa26.46■■□□□ 1.83
MAP1LC3A-201ENST00000360668 ERBB4Q15303 1308 aa26.45■■□□□ 1.83
MAP1LC3A-201ENST00000360668 THSD7AQ9UPZ6 1657 aa26.45■■□□□ 1.82
MAP1LC3A-201ENST00000360668 ATG3Q9NT62 314 aa26.44■■□□□ 1.82
MAP1LC3A-201ENST00000360668 VSIG10Q8N0Z9 540 aa26.43■■□□□ 1.82
MAP1LC3A-201ENST00000360668 ASAP1Q9ULH1 1129 aa26.43■■□□□ 1.82
MAP1LC3A-201ENST00000360668 PTCD1O75127 700 aaKnown RBP26.42■■□□□ 1.82
MAP1LC3A-201ENST00000360668 PRIM1P49642 420 aaKnown RBP26.42■■□□□ 1.82
MAP1LC3A-201ENST00000360668 EP400Q96L91 3159 aa26.42■■□□□ 1.82
MAP1LC3A-201ENST00000360668 ADCY9O60503 1353 aa26.42■■□□□ 1.82
MAP1LC3A-201ENST00000360668 DNAAF4Q8WXU2 420 aa26.41■■□□□ 1.82
MAP1LC3A-201ENST00000360668 ATP10DQ9P241 1426 aa26.41■■□□□ 1.82
MAP1LC3A-201ENST00000360668 PI4KAP2A4QPH2 592 aa26.41■■□□□ 1.82
MAP1LC3A-201ENST00000360668 DDX58O95786 925 aaKnown RBP26.41■■□□□ 1.82
MAP1LC3A-201ENST00000360668 PI4KAP1Q8N8J0 262 aa26.41■■□□□ 1.82
MAP1LC3A-201ENST00000360668 KSR2Q6VAB6 950 aa26.4■■□□□ 1.82
MAP1LC3A-201ENST00000360668 TEX13AQ9BXU3 409 aaPredicted RBP26.4■■□□□ 1.82
MAP1LC3A-201ENST00000360668 KAT6BQ8WYB5 2073 aa26.39■■□□□ 1.82
MAP1LC3A-201ENST00000360668 LRP10Q7Z4F1 713 aa26.39■■□□□ 1.82
MAP1LC3A-201ENST00000360668 SYTL4Q96C24 671 aaPredicted RBP26.39■■□□□ 1.82
MAP1LC3A-201ENST00000360668 MEIS3Q99687 375 aa26.39■■□□□ 1.82
MAP1LC3A-201ENST00000360668 A0A0G2JS52 829 aa26.38■■□□□ 1.81
MAP1LC3A-201ENST00000360668 MYT1Q01538 1121 aa26.38■■□□□ 1.81
MAP1LC3A-201ENST00000360668 MYL6BP14649 208 aa26.37■■□□□ 1.81
MAP1LC3A-201ENST00000360668 SRCIN1Q9C0H9 1055 aa26.37■■□□□ 1.81
MAP1LC3A-201ENST00000360668 C1orf115Q9H7X2 142 aa26.37■■□□□ 1.81
MAP1LC3A-201ENST00000360668 BEND3Q5T5X7 828 aa26.37■■□□□ 1.81
MAP1LC3A-201ENST00000360668 KRT27Q7Z3Y8 459 aa26.37■■□□□ 1.81
MAP1LC3A-201ENST00000360668 GNAI3P08754 354 aa26.36■■□□□ 1.81
MAP1LC3A-201ENST00000360668 MAP3K2Q9Y2U5 619 aa26.36■■□□□ 1.81
MAP1LC3A-201ENST00000360668 XAGE3Q8WTP9 111 aa26.35■■□□□ 1.81
MAP1LC3A-201ENST00000360668 COPS6Q7L5N1 327 aa26.34■■□□□ 1.81
MAP1LC3A-201ENST00000360668 ACSBG1Q96GR2 724 aa26.34■■□□□ 1.81
MAP1LC3A-201ENST00000360668 AIMP1Q12904 312 aaKnown RBP26.33■■□□□ 1.81
MAP1LC3A-201ENST00000360668 RPAP2Q8IXW5 612 aaPredicted RBP26.33■■□□□ 1.81
MAP1LC3A-201ENST00000360668 RBM42Q9BTD8 480 aaKnown RBP26.33■■□□□ 1.81
MAP1LC3A-201ENST00000360668 NBPF26B4DH59 902 aa26.33■■□□□ 1.8
MAP1LC3A-201ENST00000360668 NBPF14Q5TI25 921 aa26.33■■□□□ 1.8
MAP1LC3A-201ENST00000360668 NBPF10Q6P3W6 841 aaKnown RBP26.33■■□□□ 1.8
MAP1LC3A-201ENST00000360668 NBPF15Q8N660 670 aa26.33■■□□□ 1.8
MAP1LC3A-201ENST00000360668 IBTKQ9P2D0 1353 aaPredicted RBP26.32■■□□□ 1.8
MAP1LC3A-201ENST00000360668 ALDH1L1O75891 902 aa26.32■■□□□ 1.8
MAP1LC3A-201ENST00000360668 GNAI2P04899 355 aa26.32■■□□□ 1.8
MAP1LC3A-201ENST00000360668 SIRT2Q8IXJ6 389 aa26.32■■□□□ 1.8
MAP1LC3A-201ENST00000360668 SMC5Q8IY18 1101 aa26.32■■□□□ 1.8
MAP1LC3A-201ENST00000360668 ANKRD44Q8N8A2 993 aa26.32■■□□□ 1.8
MAP1LC3A-201ENST00000360668 BRWD3Q6RI45 1802 aa26.31■■□□□ 1.8
MAP1LC3A-201ENST00000360668 STARD3NLO95772 234 aa26.31■■□□□ 1.8
MAP1LC3A-201ENST00000360668 DNAJC10Q8IXB1 793 aa26.31■■□□□ 1.8
MAP1LC3A-201ENST00000360668 USP44Q9H0E7 712 aa26.31■■□□□ 1.8
MAP1LC3A-201ENST00000360668 A1BGP04217 495 aa26.3■■□□□ 1.8
MAP1LC3A-201ENST00000360668 PIP4K2AP48426 406 aaPredicted RBP26.3■■□□□ 1.8
MAP1LC3A-201ENST00000360668 RIC3Q7Z5B4 369 aa26.3■■□□□ 1.8
MAP1LC3A-201ENST00000360668 CCDC125Q86Z20 511 aa26.3■■□□□ 1.8
MAP1LC3A-201ENST00000360668 CEP85Q6P2H3 762 aa26.29■■□□□ 1.8
MAP1LC3A-201ENST00000360668 ANKRD13DQ6ZTN6 518 aa26.29■■□□□ 1.8
MAP1LC3A-201ENST00000360668 LINS1Q8NG48 757 aa26.29■■□□□ 1.8
MAP1LC3A-201ENST00000360668 SLC4A9Q96Q91 983 aa26.29■■□□□ 1.8
MAP1LC3A-201ENST00000360668 TJP1Q07157 1748 aa26.28■■□□□ 1.8
MAP1LC3A-201ENST00000360668 SMARCC1Q92922 1105 aaPredicted RBP26.28■■□□□ 1.8
MAP1LC3A-201ENST00000360668 GCC1Q96CN9 775 aa26.28■■□□□ 1.8
MAP1LC3A-201ENST00000360668 CICQ96RK0 1608 aaPredicted RBP26.27■■□□□ 1.8
MAP1LC3A-201ENST00000360668 UBTFL1P0CB47 393 aaPredicted RBP26.27■■□□□ 1.8
MAP1LC3A-201ENST00000360668 PLBD2Q8NHP8 589 aa26.27■■□□□ 1.8
MAP1LC3A-201ENST00000360668 METTL22Q9BUU2 404 aaPredicted RBP26.27■■□□□ 1.8
MAP1LC3A-201ENST00000360668 PDZRN3Q9UPQ7 1066 aa26.27■■□□□ 1.8
MAP1LC3A-201ENST00000360668 NEXNQ0ZGT2 675 aa26.26■■□□□ 1.79
MAP1LC3A-201ENST00000360668 SKAP1Q86WV1 359 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms