RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 CFAP65Q6ZU64 1925 aaKnown RBP9.5□□□□□ -0.89
CLCN3-202ENST00000360642 SLF2Q8IX21 1173 aa9.5□□□□□ -0.89
CLCN3-202ENST00000360642 PRMT3O60678 531 aa9.5□□□□□ -0.89
CLCN3-202ENST00000360642 ABL1P00519 1130 aa9.5□□□□□ -0.89
CLCN3-202ENST00000360642 RASA1P20936 1047 aa9.5□□□□□ -0.89
CLCN3-202ENST00000360642 MKNK1Q9BUB5 465 aa9.5□□□□□ -0.89
CLCN3-202ENST00000360642 NEXMIFQ5QGS0 1516 aa9.49□□□□□ -0.89
CLCN3-202ENST00000360642 RAPGEF3O95398 923 aa9.49□□□□□ -0.89
CLCN3-202ENST00000360642 C20orf194Q5TEA3 1177 aa9.49□□□□□ -0.89
CLCN3-202ENST00000360642 POTEEQ6S8J3 1075 aa9.49□□□□□ -0.89
CLCN3-202ENST00000360642 TRAK1Q9UPV9 953 aa9.49□□□□□ -0.89
CLCN3-202ENST00000360642 USP32Q8NFA0 1604 aa9.49□□□□□ -0.89
CLCN3-202ENST00000360642 NGEFQ8N5V2 710 aa9.49□□□□□ -0.89
CLCN3-202ENST00000360642 PUS7Q96PZ0 661 aaKnown RBP9.49□□□□□ -0.89
CLCN3-202ENST00000360642 RICTORQ6R327 1708 aa9.49□□□□□ -0.89
CLCN3-202ENST00000360642 CCDC146Q8IYE0 955 aa9.48□□□□□ -0.89
CLCN3-202ENST00000360642 KIAA1024Q9UPX6 916 aa9.48□□□□□ -0.89
CLCN3-202ENST00000360642 APAF1O14727 1248 aa9.48□□□□□ -0.89
CLCN3-202ENST00000360642 TMEM132EQ6IEE7 984 aa9.48□□□□□ -0.89
CLCN3-202ENST00000360642 NOP58Q9Y2X3 529 aaKnown RBP9.48□□□□□ -0.89
CLCN3-202ENST00000360642 NSD3Q9BZ95 1437 aa9.48□□□□□ -0.89
CLCN3-202ENST00000360642 GLI2P10070 1586 aa9.48□□□□□ -0.89
CLCN3-202ENST00000360642 GJA5P36382 358 aa9.48□□□□□ -0.89
CLCN3-202ENST00000360642 IPO9Q96P70 1041 aaKnown RBP9.48□□□□□ -0.89
CLCN3-202ENST00000360642 PPP1R1BQ9UD71 204 aaPredicted RBP9.48□□□□□ -0.89
CLCN3-202ENST00000360642 SHPRHQ149N8 1683 aa9.47□□□□□ -0.89
CLCN3-202ENST00000360642 KDM2BQ8NHM5 1336 aa9.47□□□□□ -0.89
CLCN3-202ENST00000360642 DNAJC14Q6Y2X3 702 aaPredicted RBP9.47□□□□□ -0.89
CLCN3-202ENST00000360642 SKAP1Q86WV1 359 aa9.47□□□□□ -0.89
CLCN3-202ENST00000360642 SLC12A5Q9H2X9 1139 aa9.47□□□□□ -0.89
CLCN3-202ENST00000360642 NKTRP30414 1462 aaKnown RBP9.47□□□□□ -0.89
CLCN3-202ENST00000360642 ZFYVE9O95405 1425 aa9.47□□□□□ -0.89
CLCN3-202ENST00000360642 ARHGEF28Q8N1W1 1705 aaKnown RBP9.47□□□□□ -0.89
CLCN3-202ENST00000360642 FAM69CQ0P6D2 419 aa9.46□□□□□ -0.89
CLCN3-202ENST00000360642 BACH2Q9BYV9 841 aa9.46□□□□□ -0.89
CLCN3-202ENST00000360642 ZNF16P17020 682 aaPredicted RBP9.46□□□□□ -0.89
CLCN3-202ENST00000360642 ANP32AP39687 249 aaKnown RBP9.46□□□□□ -0.89
CLCN3-202ENST00000360642 PRIMPOLQ96LW4 560 aa9.46□□□□□ -0.89
CLCN3-202ENST00000360642 DMRTA1Q5VZB9 504 aa9.46□□□□□ -0.9
CLCN3-202ENST00000360642 TULP4Q9NRJ4 1543 aa9.46□□□□□ -0.9
CLCN3-202ENST00000360642 USP17L15C9J2P7 530 aa9.45□□□□□ -0.9
CLCN3-202ENST00000360642 USP17L10C9JJH3 530 aa9.45□□□□□ -0.9
CLCN3-202ENST00000360642 USP17L13C9JLJ4 530 aa9.45□□□□□ -0.9
CLCN3-202ENST00000360642 USP17L12C9JPN9 530 aa9.45□□□□□ -0.9
CLCN3-202ENST00000360642 USP17L11C9JVI0 530 aa9.45□□□□□ -0.9
CLCN3-202ENST00000360642 USP17L21D6R901 530 aa9.45□□□□□ -0.9
CLCN3-202ENST00000360642 USP17L18D6R9N7 530 aa9.45□□□□□ -0.9
CLCN3-202ENST00000360642 USP17L22D6RA61 530 aa9.45□□□□□ -0.9
CLCN3-202ENST00000360642 USP17L17D6RBQ6 530 aa9.45□□□□□ -0.9
CLCN3-202ENST00000360642 USP17L19D6RCP7 530 aa9.45□□□□□ -0.9
CLCN3-202ENST00000360642 USP17L20D6RJB6 530 aa9.45□□□□□ -0.9
CLCN3-202ENST00000360642 CLDN10P78369 228 aa9.45□□□□□ -0.9
CLCN3-202ENST00000360642 USP17L24Q0WX57 530 aa9.45□□□□□ -0.9
CLCN3-202ENST00000360642 ZBED2Q9BTP6 218 aa9.45□□□□□ -0.9
CLCN3-202ENST00000360642 IDI1Q13907 227 aa9.45□□□□□ -0.9
CLCN3-202ENST00000360642 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.45□□□□□ -0.9
CLCN3-202ENST00000360642 BCL2L13Q9BXK5 485 aa9.45□□□□□ -0.9
CLCN3-202ENST00000360642 SSFA2P28290 1259 aa9.44□□□□□ -0.9
CLCN3-202ENST00000360642 YEATS2Q9ULM3 1422 aa9.44□□□□□ -0.9
CLCN3-202ENST00000360642 CTHP32929 405 aa9.44□□□□□ -0.9
CLCN3-202ENST00000360642 MORC1Q86VD1 984 aa9.44□□□□□ -0.9
CLCN3-202ENST00000360642 SLC52A1Q9NWF4 448 aa9.44□□□□□ -0.9
CLCN3-202ENST00000360642 USP46P62068 366 aa9.44□□□□□ -0.9
CLCN3-202ENST00000360642 DPYDQ12882 1025 aa9.44□□□□□ -0.9
CLCN3-202ENST00000360642 DOK7Q18PE1 504 aa9.44□□□□□ -0.9
CLCN3-202ENST00000360642 EVC2Q86UK5 1308 aa9.43□□□□□ -0.9
CLCN3-202ENST00000360642 ANKRD36BQ8N2N9 1353 aa9.43□□□□□ -0.9
CLCN3-202ENST00000360642 IQSEC2Q5JU85 1478 aa9.43□□□□□ -0.9
CLCN3-202ENST00000360642 TMEM131LA2VDJ0 1609 aa9.43□□□□□ -0.9
CLCN3-202ENST00000360642 CENPQQ7L2Z9 268 aaPredicted RBP9.43□□□□□ -0.9
CLCN3-202ENST00000360642 PRDM9Q9NQV7 894 aa9.43□□□□□ -0.9
CLCN3-202ENST00000360642 CGNL1Q0VF96 1302 aa9.43□□□□□ -0.9
CLCN3-202ENST00000360642 NSD2O96028 1365 aa9.43□□□□□ -0.9
CLCN3-202ENST00000360642 PTK7Q13308 1070 aa9.43□□□□□ -0.9
CLCN3-202ENST00000360642 C9orf131Q5VYM1 1079 aa9.43□□□□□ -0.9
CLCN3-202ENST00000360642 PREX1Q8TCU6 1659 aa9.42□□□□□ -0.9
CLCN3-202ENST00000360642 ATP6V1AP38606 617 aa9.42□□□□□ -0.9
CLCN3-202ENST00000360642 OCSTAMPQ9BR26 566 aa9.42□□□□□ -0.9
CLCN3-202ENST00000360642 ANKRD33BA6NCL7 494 aa9.41□□□□□ -0.9
CLCN3-202ENST00000360642 SOCS7O14512 581 aa9.41□□□□□ -0.9
CLCN3-202ENST00000360642 BCAR3O75815 825 aa9.41□□□□□ -0.9
CLCN3-202ENST00000360642 OGFOD1Q8N543 542 aa9.41□□□□□ -0.9
CLCN3-202ENST00000360642 RUNDC1Q96C34 613 aa9.41□□□□□ -0.9
CLCN3-202ENST00000360642 PURBQ96QR8 312 aaKnown RBP9.41□□□□□ -0.9
CLCN3-202ENST00000360642 SEPT3Q9UH03 358 aa9.41□□□□□ -0.9
CLCN3-202ENST00000360642 ZBBXA8MT70 800 aa9.41□□□□□ -0.9
CLCN3-202ENST00000360642 STAU1O95793 577 aaKnown RBP9.41□□□□□ -0.9
CLCN3-202ENST00000360642 AMOTL2Q9Y2J4 779 aa9.41□□□□□ -0.9
CLCN3-202ENST00000360642 MYO5BQ9ULV0 1848 aa9.41□□□□□ -0.9
CLCN3-202ENST00000360642 ATP2B4P23634 1241 aa9.41□□□□□ -0.9
CLCN3-202ENST00000360642 MTHFSP49914 203 aa9.41□□□□□ -0.9
CLCN3-202ENST00000360642 GNEQ9Y223 722 aaKnown RBP9.41□□□□□ -0.9
CLCN3-202ENST00000360642 NINLQ9Y2I6 1382 aa9.4□□□□□ -0.9
CLCN3-202ENST00000360642 MARSP56192 900 aaKnown RBP9.4□□□□□ -0.9
CLCN3-202ENST00000360642 NR1H3Q13133 447 aa9.4□□□□□ -0.9
CLCN3-202ENST00000360642 PTPRMP28827 1452 aa9.4□□□□□ -0.9
CLCN3-202ENST00000360642 H3BRB1 525 aa9.4□□□□□ -0.91
CLCN3-202ENST00000360642 RIMBP2O15034 1052 aa9.4□□□□□ -0.91
CLCN3-202ENST00000360642 TNNT2P45379 298 aaPredicted RBP9.4□□□□□ -0.91
CLCN3-202ENST00000360642 TUT1Q9H6E5 874 aaKnown RBP9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 308.1 ms