RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 PKD2L1Q9P0L9 805 aa6.71□□□□□ -1.33
BRCA1-203ENST00000357654 CCDC39Q9UFE4 941 aa6.71□□□□□ -1.33
BRCA1-203ENST00000357654 RIMBP2O15034 1052 aa6.71□□□□□ -1.34
BRCA1-203ENST00000357654 HARSP12081 509 aaKnown RBP6.71□□□□□ -1.34
BRCA1-203ENST00000357654 ATF7IPQ6VMQ6 1270 aa6.71□□□□□ -1.34
BRCA1-203ENST00000357654 JMYQ8N9B5 988 aa6.71□□□□□ -1.34
BRCA1-203ENST00000357654 SEPT10Q9P0V9 454 aa6.71□□□□□ -1.34
BRCA1-203ENST00000357654 DDX19BQ9UMR2 479 aa6.71□□□□□ -1.34
BRCA1-203ENST00000357654 ANKRD30AQ9BXX3 1397 aa6.71□□□□□ -1.34
BRCA1-203ENST00000357654 TMEM266Q2M3C6 531 aa6.71□□□□□ -1.34
BRCA1-203ENST00000357654 IFNLR1Q8IU57 520 aaPredicted RBP6.71□□□□□ -1.34
BRCA1-203ENST00000357654 PRKAG2Q9UGJ0 569 aa6.71□□□□□ -1.34
BRCA1-203ENST00000357654 FSD2A1L4K1 749 aa6.71□□□□□ -1.34
BRCA1-203ENST00000357654 SPDYE16A6NNV3 312 aaPredicted RBP6.71□□□□□ -1.34
BRCA1-203ENST00000357654 SPDYE2Q495Y8 402 aa6.71□□□□□ -1.34
BRCA1-203ENST00000357654 GCOM1H8Y6P7 765 aaPredicted RBP6.7□□□□□ -1.34
BRCA1-203ENST00000357654 MYZAPP0CAP1 466 aa6.7□□□□□ -1.34
BRCA1-203ENST00000357654 FKBP15Q5T1M5 1219 aa6.7□□□□□ -1.34
BRCA1-203ENST00000357654 PRPF40AO75400 957 aaKnown RBP6.7□□□□□ -1.34
BRCA1-203ENST00000357654 HDGFL1Q5TGJ6 251 aa6.7□□□□□ -1.34
BRCA1-203ENST00000357654 RPUSD2Q8IZ73 545 aaKnown RBP6.7□□□□□ -1.34
BRCA1-203ENST00000357654 OGFOD1Q8N543 542 aa6.7□□□□□ -1.34
BRCA1-203ENST00000357654 ERICH4A6NGS2 130 aa6.7□□□□□ -1.34
BRCA1-203ENST00000357654 HLA-DOAP06340 250 aa6.7□□□□□ -1.34
BRCA1-203ENST00000357654 CAPN15O75808 1086 aa6.7□□□□□ -1.34
BRCA1-203ENST00000357654 EEF2P13639 858 aaKnown RBP6.7□□□□□ -1.34
BRCA1-203ENST00000357654 FAM47CQ5HY64 1035 aa6.7□□□□□ -1.34
BRCA1-203ENST00000357654 ACBD5Q5T8D3 534 aaPredicted RBP6.7□□□□□ -1.34
BRCA1-203ENST00000357654 SREK1Q8WXA9 508 aaKnown RBP6.7□□□□□ -1.34
BRCA1-203ENST00000357654 TFCP2L1Q9NZI6 479 aa6.7□□□□□ -1.34
BRCA1-203ENST00000357654 A0A1W2PRG0 241 aa6.7□□□□□ -1.34
BRCA1-203ENST00000357654 CCP110O43303 1012 aa6.7□□□□□ -1.34
BRCA1-203ENST00000357654 GNAI1P63096 354 aa6.7□□□□□ -1.34
BRCA1-203ENST00000357654 IQCEQ6IPM2 695 aa6.7□□□□□ -1.34
BRCA1-203ENST00000357654 GSDMBQ8TAX9 411 aa6.7□□□□□ -1.34
BRCA1-203ENST00000357654 PARD3BQ8TEW8 1205 aa6.7□□□□□ -1.34
BRCA1-203ENST00000357654 JDP2Q8WYK2 163 aa6.7□□□□□ -1.34
BRCA1-203ENST00000357654 CHMP6Q96FZ7 201 aa6.7□□□□□ -1.34
BRCA1-203ENST00000357654 CEP126Q9P2H0 1117 aa6.7□□□□□ -1.34
BRCA1-203ENST00000357654 TRMT112Q9UI30 125 aaKnown RBP6.7□□□□□ -1.34
BRCA1-203ENST00000357654 RNF169Q8NCN4 708 aa6.69□□□□□ -1.34
BRCA1-203ENST00000357654 TNMDQ9H2S6 317 aa6.69□□□□□ -1.34
BRCA1-203ENST00000357654 SMARCA2P51531 1590 aa6.69□□□□□ -1.34
BRCA1-203ENST00000357654 GUCY1B3Q02153 619 aa6.69□□□□□ -1.34
BRCA1-203ENST00000357654 NAP1L3Q99457 506 aaPredicted RBP6.69□□□□□ -1.34
BRCA1-203ENST00000357654 GOLGA8AA7E2F4 631 aa6.69□□□□□ -1.34
BRCA1-203ENST00000357654 GOLGA8BA8MQT2 603 aa6.69□□□□□ -1.34
BRCA1-203ENST00000357654 STX6O43752 255 aa6.69□□□□□ -1.34
BRCA1-203ENST00000357654 CALM1P0DP23 149 aa6.69□□□□□ -1.34
BRCA1-203ENST00000357654 CALM2P0DP24 149 aa6.69□□□□□ -1.34
BRCA1-203ENST00000357654 CALM3P0DP25 149 aa6.69□□□□□ -1.34
BRCA1-203ENST00000357654 PRKCSHP14314 528 aaPredicted RBP6.69□□□□□ -1.34
BRCA1-203ENST00000357654 CFAP70Q5T0N1 1121 aa6.69□□□□□ -1.34
BRCA1-203ENST00000357654 DDX46Q7L014 1031 aaKnown RBP6.69□□□□□ -1.34
BRCA1-203ENST00000357654 VPS36Q86VN1 386 aa6.69□□□□□ -1.34
BRCA1-203ENST00000357654 CCDC148Q8NFR7 591 aa6.69□□□□□ -1.34
BRCA1-203ENST00000357654 DACT3Q96B18 629 aaPredicted RBP6.69□□□□□ -1.34
BRCA1-203ENST00000357654 EPSTI1Q96J88 318 aa6.69□□□□□ -1.34
BRCA1-203ENST00000357654 TRERF1Q96PN7 1200 aa6.69□□□□□ -1.34
BRCA1-203ENST00000357654 HINFPQ9BQA5 517 aa6.69□□□□□ -1.34
BRCA1-203ENST00000357654 MAP10Q9P2G4 905 aa6.69□□□□□ -1.34
BRCA1-203ENST00000357654 ATP6V1E1P36543 226 aa6.69□□□□□ -1.34
BRCA1-203ENST00000357654 ZBTB16Q05516 673 aa6.69□□□□□ -1.34
BRCA1-203ENST00000357654 DIXDC1Q155Q3 683 aa6.69□□□□□ -1.34
BRCA1-203ENST00000357654 CAVIN1Q6NZI2 390 aaKnown RBP6.69□□□□□ -1.34
BRCA1-203ENST00000357654 GSTA5Q7RTV2 222 aa6.69□□□□□ -1.34
BRCA1-203ENST00000357654 AFG3L2Q9Y4W6 797 aa6.69□□□□□ -1.34
BRCA1-203ENST00000357654 HIP1O00291 1037 aa6.69□□□□□ -1.34
BRCA1-203ENST00000357654 FBXW4P57775 412 aa6.69□□□□□ -1.34
BRCA1-203ENST00000357654 IRX5P78411 483 aaPredicted RBP6.69□□□□□ -1.34
BRCA1-203ENST00000357654 CCDC40Q4G0X9 1142 aa6.69□□□□□ -1.34
BRCA1-203ENST00000357654 CWC27Q6UX04 472 aaKnown RBP6.69□□□□□ -1.34
BRCA1-203ENST00000357654 SLF2Q8IX21 1173 aa6.69□□□□□ -1.34
BRCA1-203ENST00000357654 SFMBT1Q9UHJ3 866 aa6.69□□□□□ -1.34
BRCA1-203ENST00000357654 KIF27Q86VH2 1401 aa6.69□□□□□ -1.34
BRCA1-203ENST00000357654 CDKL5O76039 1030 aa6.68□□□□□ -1.34
BRCA1-203ENST00000357654 IDEP14735 1019 aa6.68□□□□□ -1.34
BRCA1-203ENST00000357654 NEK4P51957 841 aa6.68□□□□□ -1.34
BRCA1-203ENST00000357654 CETN1Q12798 172 aa6.68□□□□□ -1.34
BRCA1-203ENST00000357654 GAS2L2Q8NHY3 880 aa6.68□□□□□ -1.34
BRCA1-203ENST00000357654 SYNDIG1Q9H7V2 258 aa6.68□□□□□ -1.34
BRCA1-203ENST00000357654 IFIT1P09914 478 aaKnown RBP6.68□□□□□ -1.34
BRCA1-203ENST00000357654 KIF5AQ12840 1032 aa6.68□□□□□ -1.34
BRCA1-203ENST00000357654 IFRD2Q12894 506 aaPredicted RBP6.68□□□□□ -1.34
BRCA1-203ENST00000357654 SPECC1Q5M775 1068 aa6.68□□□□□ -1.34
BRCA1-203ENST00000357654 CCDC50Q8IVM0 306 aa6.68□□□□□ -1.34
BRCA1-203ENST00000357654 ANAPC4Q9UJX5 808 aa6.68□□□□□ -1.34
BRCA1-203ENST00000357654 TTLL3Q9Y4R7 772 aa6.68□□□□□ -1.34
BRCA1-203ENST00000357654 PPP1R21Q6ZMI0 780 aa6.68□□□□□ -1.34
BRCA1-203ENST00000357654 USHBP1Q8N6Y0 703 aa6.68□□□□□ -1.34
BRCA1-203ENST00000357654 SLC4A2P04920 1241 aa6.68□□□□□ -1.34
BRCA1-203ENST00000357654 HLTFQ14527 1009 aaKnown RBP eCLIP6.68□□□□□ -1.343e-6■■□□□ 13.4
BRCA1-203ENST00000357654 IQCGQ9H095 443 aaKnown RBP6.68□□□□□ -1.34
BRCA1-203ENST00000357654 CYP46A1Q9Y6A2 500 aa6.68□□□□□ -1.34
BRCA1-203ENST00000357654 PARP3Q9Y6F1 533 aa6.68□□□□□ -1.34
BRCA1-203ENST00000357654 GOLGA6CA6NDK9 693 aa6.68□□□□□ -1.34
BRCA1-203ENST00000357654 GOLGA6BA6NDN3 693 aa6.68□□□□□ -1.34
BRCA1-203ENST00000357654 GOLGA6DP0CG33 693 aa6.68□□□□□ -1.34
BRCA1-203ENST00000357654 RBM10P98175 930 aaKnown RBP6.68□□□□□ -1.34
BRCA1-203ENST00000357654 KIF22Q14807 665 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 295.1 ms