RNA–Protein interactions for RNA: ENST00000357490.6

COPS7B-202, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 4

Gene COPS7B, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-202ENST00000357490 TTC5Q8N0Z6 440 aa21.03■□□□□ 0.96
COPS7B-202ENST00000357490 KCPQ6ZWJ8 1503 aa21.03■□□□□ 0.96
COPS7B-202ENST00000357490 GRIN3BO60391 1043 aa21.02■□□□□ 0.96
COPS7B-202ENST00000357490 ZNF496Q96IT1 587 aaPredicted RBP21.02■□□□□ 0.96
COPS7B-202ENST00000357490 MYH14Q7Z406 1995 aaKnown RBP21.02■□□□□ 0.96
COPS7B-202ENST00000357490 UBR2Q8IWV8 1755 aa21.02■□□□□ 0.96
COPS7B-202ENST00000357490 CICQ96RK0 1608 aaPredicted RBP21.01■□□□□ 0.95
COPS7B-202ENST00000357490 NCBP3Q53F19 620 aaKnown RBP21.01■□□□□ 0.95
COPS7B-202ENST00000357490 LAS1LQ9Y4W2 734 aaKnown RBP21.01■□□□□ 0.95
COPS7B-202ENST00000357490 RC3H1Q5TC82 1133 aaKnown RBP21■□□□□ 0.95
COPS7B-202ENST00000357490 RTCBQ9Y3I0 505 aaKnown RBP21■□□□□ 0.95
COPS7B-202ENST00000357490 ADRA2BP18089 450 aa20.99■□□□□ 0.95
COPS7B-202ENST00000357490 SMIM5Q71RC9 77 aa20.99■□□□□ 0.95
COPS7B-202ENST00000357490 TSPYL4Q9UJ04 414 aa20.99■□□□□ 0.95
COPS7B-202ENST00000357490 C4AP0C0L4 1744 aa20.98■□□□□ 0.95
COPS7B-202ENST00000357490 KDM3BQ7LBC6 1761 aa20.98■□□□□ 0.95
COPS7B-202ENST00000357490 CHL1O00533 1208 aa20.98■□□□□ 0.95
COPS7B-202ENST00000357490 TRAPPC3LQ5T215 181 aa20.98■□□□□ 0.95
COPS7B-202ENST00000357490 FMNL2Q96PY5 1086 aa20.98■□□□□ 0.95
COPS7B-202ENST00000357490 KIF13BQ9NQT8 1826 aa20.98■□□□□ 0.95
COPS7B-202ENST00000357490 CNTNAP4Q9C0A0 1308 aa20.98■□□□□ 0.95
COPS7B-202ENST00000357490 HEG1Q9ULI3 1381 aa20.97■□□□□ 0.95
COPS7B-202ENST00000357490 YBX3P16989 372 aaKnown RBP eCLIP20.97■□□□□ 0.95
COPS7B-202ENST00000357490 CALD1Q05682 793 aaKnown RBP20.97■□□□□ 0.95
COPS7B-202ENST00000357490 DNAJC10Q8IXB1 793 aa20.97■□□□□ 0.95
COPS7B-202ENST00000357490 CFAP44Q96MT7 982 aa20.97■□□□□ 0.95
COPS7B-202ENST00000357490 BABAM1Q9NWV8 329 aa20.97■□□□□ 0.95
COPS7B-202ENST00000357490 TJP1Q07157 1748 aa20.97■□□□□ 0.95
COPS7B-202ENST00000357490 ZNF853P0CG23 659 aa20.96■□□□□ 0.95
COPS7B-202ENST00000357490 EIF4A1P60842 406 aaKnown RBP20.96■□□□□ 0.95
COPS7B-202ENST00000357490 VSIG10Q8N0Z9 540 aa20.96■□□□□ 0.95
COPS7B-202ENST00000357490 NGEFQ8N5V2 710 aa20.96■□□□□ 0.95
COPS7B-202ENST00000357490 PRAMEF22A3QJZ6 481 aa20.94■□□□□ 0.94
COPS7B-202ENST00000357490 RPS6KA4O75676 772 aa20.94■□□□□ 0.94
COPS7B-202ENST00000357490 WDR63Q8IWG1 891 aa20.94■□□□□ 0.94
COPS7B-202ENST00000357490 NLGN1Q8N2Q7 840 aa20.94■□□□□ 0.94
COPS7B-202ENST00000357490 MBIPQ9NS73 344 aa20.94■□□□□ 0.94
COPS7B-202ENST00000357490 IFT57Q9NWB7 429 aa20.94■□□□□ 0.94
COPS7B-202ENST00000357490 MMP10P09238 476 aa20.93■□□□□ 0.94
COPS7B-202ENST00000357490 RFC4P35249 363 aa20.93■□□□□ 0.94
COPS7B-202ENST00000357490 GNAI1P63096 354 aa20.93■□□□□ 0.94
COPS7B-202ENST00000357490 SNRPA1P09661 255 aaKnown RBP20.92■□□□□ 0.94
COPS7B-202ENST00000357490 CYP19A1P11511 503 aaPredicted RBP20.92■□□□□ 0.94
COPS7B-202ENST00000357490 USP16Q9Y5T5 823 aa20.92■□□□□ 0.94
COPS7B-202ENST00000357490 ZNF521Q96K83 1311 aa20.92■□□□□ 0.94
COPS7B-202ENST00000357490 GIGYF1O75420 1035 aaPredicted RBP20.91■□□□□ 0.94
COPS7B-202ENST00000357490 CRKLP46109 303 aaKnown RBP20.91■□□□□ 0.94
COPS7B-202ENST00000357490 IL16Q14005 1332 aa20.91■□□□□ 0.94
COPS7B-202ENST00000357490 KRT24Q2M2I5 525 aa20.91■□□□□ 0.94
COPS7B-202ENST00000357490 ARHGEF1Q92888 912 aaKnown RBP20.91■□□□□ 0.94
COPS7B-202ENST00000357490 N4BP2Q86UW6 1770 aaPredicted RBP20.9■□□□□ 0.94
COPS7B-202ENST00000357490 INTS5Q6P9B9 1019 aaKnown RBP20.9■□□□□ 0.94
COPS7B-202ENST00000357490 SPINK5Q9NQ38 1064 aaPredicted RBP20.9■□□□□ 0.94
COPS7B-202ENST00000357490 TSR2Q969E8 191 aaKnown RBP20.89■□□□□ 0.93
COPS7B-202ENST00000357490 TEX13AQ9BXU3 409 aaPredicted RBP20.89■□□□□ 0.93
COPS7B-202ENST00000357490 KIAA1551Q9HCM1 1747 aa20.89■□□□□ 0.93
COPS7B-202ENST00000357490 STARD3NLO95772 234 aa20.88■□□□□ 0.93
COPS7B-202ENST00000357490 GYS1P13807 737 aa20.87■□□□□ 0.93
COPS7B-202ENST00000357490 HNRNPUQ00839 825 aaKnown RBP eCLIP20.87■□□□□ 0.93
COPS7B-202ENST00000357490 CCDC87Q9NVE4 849 aa20.87■□□□□ 0.93
COPS7B-202ENST00000357490 BRCA1P38398 1863 aaKnown RBP20.87■□□□□ 0.93
COPS7B-202ENST00000357490 A1BGP04217 495 aa20.86■□□□□ 0.93
COPS7B-202ENST00000357490 ZBTB1Q9Y2K1 713 aa20.86■□□□□ 0.93
COPS7B-202ENST00000357490 TGFB2P61812 414 aa20.85■□□□□ 0.93
COPS7B-202ENST00000357490 PARP3Q9Y6F1 533 aa20.85■□□□□ 0.93
COPS7B-202ENST00000357490 C10orf71Q711Q0 1435 aa20.85■□□□□ 0.93
COPS7B-202ENST00000357490 FANCIQ9NVI1 1328 aa20.84■□□□□ 0.93
COPS7B-202ENST00000357490 PXDNLA1KZ92 1463 aa20.84■□□□□ 0.93
COPS7B-202ENST00000357490 CANXP27824 592 aaKnown RBP20.84■□□□□ 0.93
COPS7B-202ENST00000357490 GOLGA2Q08379 1002 aa20.84■□□□□ 0.93
COPS7B-202ENST00000357490 DUSP27Q5VZP5 1158 aa20.84■□□□□ 0.93
COPS7B-202ENST00000357490 C8orf58Q8NAV2 365 aa20.84■□□□□ 0.93
COPS7B-202ENST00000357490 USP42Q9H9J4 1324 aaKnown RBP20.83■□□□□ 0.93
COPS7B-202ENST00000357490 ELL2O00472 640 aaPredicted RBP20.83■□□□□ 0.93
COPS7B-202ENST00000357490 PIP4K2AP48426 406 aaPredicted RBP20.83■□□□□ 0.93
COPS7B-202ENST00000357490 CDCA7LQ96GN5 454 aa20.83■□□□□ 0.93
COPS7B-202ENST00000357490 LAMB4A4D0S4 1761 aa20.82■□□□□ 0.92
COPS7B-202ENST00000357490 EIF2S2P20042 333 aaKnown RBP20.82■□□□□ 0.92
COPS7B-202ENST00000357490 C1QTNF8P60827 252 aa20.82■□□□□ 0.92
COPS7B-202ENST00000357490 TSPYL6Q8N831 410 aa20.82■□□□□ 0.92
COPS7B-202ENST00000357490 ARFGEF1Q9Y6D6 1849 aa20.82■□□□□ 0.92
COPS7B-202ENST00000357490 SOS1Q07889 1333 aaPredicted RBP20.81■□□□□ 0.92
COPS7B-202ENST00000357490 NBPF26B4DH59 902 aa20.81■□□□□ 0.92
COPS7B-202ENST00000357490 NBPF10Q6P3W6 841 aaKnown RBP20.81■□□□□ 0.92
COPS7B-202ENST00000357490 NBPF15Q8N660 670 aa20.81■□□□□ 0.92
COPS7B-202ENST00000357490 NECTIN2Q92692 538 aa20.81■□□□□ 0.92
COPS7B-202ENST00000357490 MYH16Q9H6N6 1097 aa20.81■□□□□ 0.92
COPS7B-202ENST00000357490 WWC3Q9ULE0 1092 aa20.81■□□□□ 0.92
COPS7B-202ENST00000357490 ATP10DQ9P241 1426 aa20.8■□□□□ 0.92
COPS7B-202ENST00000357490 ZPR1O75312 459 aa20.8■□□□□ 0.92
COPS7B-202ENST00000357490 SLFN5Q08AF3 891 aa20.8■□□□□ 0.92
COPS7B-202ENST00000357490 EIF5P55010 431 aaKnown RBP20.79■□□□□ 0.92
COPS7B-202ENST00000357490 EXOSC9Q06265 439 aaKnown RBP20.79■□□□□ 0.92
COPS7B-202ENST00000357490 SRP68Q9UHB9 627 aaKnown RBP20.79■□□□□ 0.92
COPS7B-202ENST00000357490 ADCY9O60503 1353 aa20.79■□□□□ 0.92
COPS7B-202ENST00000357490 E9PSI1 815 aa20.78■□□□□ 0.92
COPS7B-202ENST00000357490 HOXB7P09629 217 aa20.78■□□□□ 0.92
COPS7B-202ENST00000357490 FKBP8Q14318 412 aa20.78■□□□□ 0.92
COPS7B-202ENST00000357490 ZNF330Q9Y3S2 320 aaPredicted RBP20.78■□□□□ 0.92
COPS7B-202ENST00000357490 AFDNP55196 1824 aaKnown RBP20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms