RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 STAC3Q96MF2 364 aa12.76□□□□□ -0.37
GTF3C1-201ENST00000356183 GAS2L2Q8NHY3 880 aa12.76□□□□□ -0.37
GTF3C1-201ENST00000356183 COMMD10Q9Y6G5 202 aa12.76□□□□□ -0.37
GTF3C1-201ENST00000356183 NAP1L3Q99457 506 aaPredicted RBP12.76□□□□□ -0.37
GTF3C1-201ENST00000356183 RNF216Q9NWF9 866 aaPredicted RBP12.76□□□□□ -0.37
GTF3C1-201ENST00000356183 TERF1P54274 439 aa12.76□□□□□ -0.37
GTF3C1-201ENST00000356183 PLCD3Q8N3E9 789 aa12.76□□□□□ -0.37
GTF3C1-201ENST00000356183 CCDC12Q8WUD4 166 aaPredicted RBP12.76□□□□□ -0.37
GTF3C1-201ENST00000356183 DRC1Q96MC2 740 aa12.76□□□□□ -0.37
GTF3C1-201ENST00000356183 SLFN5Q08AF3 891 aa12.75□□□□□ -0.37
GTF3C1-201ENST00000356183 TTC31Q49AM3 519 aaPredicted RBP12.75□□□□□ -0.37
GTF3C1-201ENST00000356183 C20orf194Q5TEA3 1177 aa12.75□□□□□ -0.37
GTF3C1-201ENST00000356183 VPS36Q86VN1 386 aa12.75□□□□□ -0.37
GTF3C1-201ENST00000356183 SCLT1Q96NL6 688 aa12.75□□□□□ -0.37
GTF3C1-201ENST00000356183 GDPD2Q9HCC8 539 aa12.75□□□□□ -0.37
GTF3C1-201ENST00000356183 PRPF40BQ6NWY9 871 aaKnown RBP12.75□□□□□ -0.37
GTF3C1-201ENST00000356183 HDGFL1Q5TGJ6 251 aa12.75□□□□□ -0.37
GTF3C1-201ENST00000356183 FERP16591 822 aa12.75□□□□□ -0.37
GTF3C1-201ENST00000356183 WDR63Q8IWG1 891 aa12.75□□□□□ -0.37
GTF3C1-201ENST00000356183 KRT222Q8N1A0 295 aa12.75□□□□□ -0.37
GTF3C1-201ENST00000356183 CNNM3Q8NE01 707 aa12.75□□□□□ -0.37
GTF3C1-201ENST00000356183 FSD2A1L4K1 749 aa12.75□□□□□ -0.37
GTF3C1-201ENST00000356183 NOP2P46087 812 aaKnown RBP12.75□□□□□ -0.37
GTF3C1-201ENST00000356183 CEP57Q86XR8 500 aa12.75□□□□□ -0.37
GTF3C1-201ENST00000356183 KRT32Q14532 448 aa12.74□□□□□ -0.37
GTF3C1-201ENST00000356183 SYNJ1O43426 1573 aa12.74□□□□□ -0.37
GTF3C1-201ENST00000356183 SRGAP3O43295 1099 aa12.74□□□□□ -0.37
GTF3C1-201ENST00000356183 ATF7IPQ6VMQ6 1270 aa12.74□□□□□ -0.37
GTF3C1-201ENST00000356183 ZSCAN29Q8IWY8 852 aaPredicted RBP12.74□□□□□ -0.37
GTF3C1-201ENST00000356183 TMEM132EQ6IEE7 984 aa12.74□□□□□ -0.37
GTF3C1-201ENST00000356183 PPP1R14CQ8TAE6 165 aa12.74□□□□□ -0.37
GTF3C1-201ENST00000356183 CTNNA3Q9UI47 895 aa12.74□□□□□ -0.37
GTF3C1-201ENST00000356183 PLEKHH2Q8IVE3 1493 aa12.74□□□□□ -0.37
GTF3C1-201ENST00000356183 PANK2Q9BZ23 570 aa12.74□□□□□ -0.37
GTF3C1-201ENST00000356183 SPTY2D1Q68D10 685 aaPredicted RBP12.74□□□□□ -0.37
GTF3C1-201ENST00000356183 TRIM21P19474 475 aaKnown RBP12.73□□□□□ -0.37
GTF3C1-201ENST00000356183 CHMP4BP1P59074 171 aa12.73□□□□□ -0.37
GTF3C1-201ENST00000356183 GRIPAP1Q4V328 841 aa12.73□□□□□ -0.37
GTF3C1-201ENST00000356183 GSDMDP57764 484 aa12.73□□□□□ -0.37
GTF3C1-201ENST00000356183 STX1AQ16623 288 aa12.73□□□□□ -0.37
GTF3C1-201ENST00000356183 PAXBP1Q9Y5B6 917 aa12.73□□□□□ -0.37
GTF3C1-201ENST00000356183 FERMT2Q96AC1 680 aa12.73□□□□□ -0.37
GTF3C1-201ENST00000356183 FSIP1Q8NA03 581 aa12.73□□□□□ -0.37
GTF3C1-201ENST00000356183 GTPBP4Q9BZE4 634 aaKnown RBP12.73□□□□□ -0.37
GTF3C1-201ENST00000356183 NCAPD3P42695 1498 aa12.73□□□□□ -0.37
GTF3C1-201ENST00000356183 MTIF2P46199 727 aaKnown RBP12.73□□□□□ -0.37
GTF3C1-201ENST00000356183 SEC63Q9UGP8 760 aaKnown RBP12.73□□□□□ -0.37
GTF3C1-201ENST00000356183 KLHL40Q2TBA0 621 aa12.72□□□□□ -0.37
GTF3C1-201ENST00000356183 IVLP07476 585 aa12.72□□□□□ -0.37
GTF3C1-201ENST00000356183 PLEKHO1Q53GL0 409 aaPredicted RBP12.72□□□□□ -0.37
GTF3C1-201ENST00000356183 GNG11P61952 73 aa12.72□□□□□ -0.37
GTF3C1-201ENST00000356183 MPHOSPH8Q99549 860 aa12.72□□□□□ -0.37
GTF3C1-201ENST00000356183 KIF4AO95239 1232 aa12.72□□□□□ -0.37
GTF3C1-201ENST00000356183 FGFR1OPO95684 399 aaKnown RBP12.72□□□□□ -0.37
GTF3C1-201ENST00000356183 NEMFO60524 1076 aa12.72□□□□□ -0.37
GTF3C1-201ENST00000356183 IDH1O75874 414 aaKnown RBP12.72□□□□□ -0.37
GTF3C1-201ENST00000356183 NLRP6P59044 892 aa12.72□□□□□ -0.37
GTF3C1-201ENST00000356183 ZSCAN23Q3MJ62 389 aa12.72□□□□□ -0.37
GTF3C1-201ENST00000356183 TBC1D32Q96NH3 1257 aa12.72□□□□□ -0.37
GTF3C1-201ENST00000356183 CCDC85AQ96PX6 553 aaPredicted RBP12.72□□□□□ -0.37
GTF3C1-201ENST00000356183 LRP2BPQ9P2M1 347 aa12.72□□□□□ -0.37
GTF3C1-201ENST00000356183 EFCAB5A4FU69 1503 aa12.71□□□□□ -0.37
GTF3C1-201ENST00000356183 MCM6Q14566 821 aa12.71□□□□□ -0.37
GTF3C1-201ENST00000356183 CCDC82Q8N4S0 544 aa12.71□□□□□ -0.37
GTF3C1-201ENST00000356183 C8orf76Q96K31 380 aa12.71□□□□□ -0.37
GTF3C1-201ENST00000356183 ZWINTO95229 277 aa12.71□□□□□ -0.37
GTF3C1-201ENST00000356183 CCDC150Q8NCX0 1101 aa12.71□□□□□ -0.37
GTF3C1-201ENST00000356183 SELENOSQ9BQE4 189 aa12.71□□□□□ -0.37
GTF3C1-201ENST00000356183 NSRP1Q9H0G5 558 aaKnown RBP12.71□□□□□ -0.37
GTF3C1-201ENST00000356183 ABTB2Q8N961 1025 aa12.71□□□□□ -0.38
GTF3C1-201ENST00000356183 MMRN2Q9H8L6 949 aa12.71□□□□□ -0.38
GTF3C1-201ENST00000356183 CTAGE5O15320 804 aa12.71□□□□□ -0.38
GTF3C1-201ENST00000356183 MYO1BO43795 1136 aa12.71□□□□□ -0.38
GTF3C1-201ENST00000356183 CABP4P57796 275 aa12.71□□□□□ -0.38
GTF3C1-201ENST00000356183 CCDC155Q8N6L0 562 aa12.71□□□□□ -0.38
GTF3C1-201ENST00000356183 TSNARE1Q96NA8 513 aa12.71□□□□□ -0.38
GTF3C1-201ENST00000356183 CCT2P78371 535 aaKnown RBP12.7□□□□□ -0.38
GTF3C1-201ENST00000356183 TMEM57Q8N5G2 664 aa12.7□□□□□ -0.38
GTF3C1-201ENST00000356183 AIDAQ96BJ3 306 aa12.7□□□□□ -0.38
GTF3C1-201ENST00000356183 SCAPERQ9BY12 1400 aa12.7□□□□□ -0.38
GTF3C1-201ENST00000356183 ATRIPQ8WXE1 791 aa12.7□□□□□ -0.38
GTF3C1-201ENST00000356183 SEPT6Q14141 434 aa12.7□□□□□ -0.38
GTF3C1-201ENST00000356183 VPS18Q9P253 973 aa12.7□□□□□ -0.38
GTF3C1-201ENST00000356183 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.7□□□□□ -0.38
GTF3C1-201ENST00000356183 V9GYY5 206 aaPredicted RBP12.7□□□□□ -0.38
GTF3C1-201ENST00000356183 IGSF3O75054 1194 aa12.7□□□□□ -0.38
GTF3C1-201ENST00000356183 CCDC94Q9BW85 323 aaPredicted RBP12.7□□□□□ -0.38
GTF3C1-201ENST00000356183 MINDY4BA8MYZ0 360 aa12.7□□□□□ -0.38
GTF3C1-201ENST00000356183 GJB2P29033 226 aa12.7□□□□□ -0.38
GTF3C1-201ENST00000356183 SSRP1Q08945 709 aaKnown RBP12.7□□□□□ -0.38
GTF3C1-201ENST00000356183 SMAP1Q8IYB5 467 aaPredicted RBP12.7□□□□□ -0.38
GTF3C1-201ENST00000356183 TFIP11Q9UBB9 837 aaKnown RBP12.7□□□□□ -0.38
GTF3C1-201ENST00000356183 TIAM1Q13009 1591 aa12.69□□□□□ -0.38
GTF3C1-201ENST00000356183 C10orf67Q8IYJ2 551 aa12.69□□□□□ -0.38
GTF3C1-201ENST00000356183 SCAND2PQ9GZW5 306 aaPredicted RBP12.69□□□□□ -0.38
GTF3C1-201ENST00000356183 ANKRD50Q9ULJ7 1429 aa12.69□□□□□ -0.38
GTF3C1-201ENST00000356183 CCDC121Q6ZUS5 278 aa12.69□□□□□ -0.38
GTF3C1-201ENST00000356183 EXOC6BQ9Y2D4 811 aa12.69□□□□□ -0.38
GTF3C1-201ENST00000356183 CCDC144CPQ8IYA2 1237 aa12.69□□□□□ -0.38
GTF3C1-201ENST00000356183 IKBKGQ9Y6K9 419 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms