RNA–Protein interactions for RNA: ENST00000355119.8

LIMS2-202, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,045 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-202ENST00000355119 CHMLP26374 656 aa26.65■■□□□ 1.86
LIMS2-202ENST00000355119 SKOR2Q2VWA4 1001 aaPredicted RBP26.65■■□□□ 1.86
LIMS2-202ENST00000355119 CLEC17AQ6ZS10 378 aa26.65■■□□□ 1.86
LIMS2-202ENST00000355119 AXIN2Q9Y2T1 843 aa26.65■■□□□ 1.86
LIMS2-202ENST00000355119 TRIM6-TRIM34B2RNG4 842 aa26.65■■□□□ 1.86
LIMS2-202ENST00000355119 GIGYF1O75420 1035 aaPredicted RBP26.65■■□□□ 1.86
LIMS2-202ENST00000355119 MCCP23508 829 aa26.65■■□□□ 1.86
LIMS2-202ENST00000355119 FSD2A1L4K1 749 aa26.64■■□□□ 1.86
LIMS2-202ENST00000355119 SRGAP3O43295 1099 aa26.64■■□□□ 1.86
LIMS2-202ENST00000355119 HSP90AB4PQ58FF6 505 aa26.64■■□□□ 1.86
LIMS2-202ENST00000355119 RILPL2Q969X0 211 aa26.64■■□□□ 1.86
LIMS2-202ENST00000355119 CWC22Q9HCG8 908 aaKnown RBP26.64■■□□□ 1.86
LIMS2-202ENST00000355119 ALDH1L1O75891 902 aa26.63■■□□□ 1.85
LIMS2-202ENST00000355119 NBPF7P0C2Y1 421 aaPredicted RBP26.63■■□□□ 1.85
LIMS2-202ENST00000355119 KIF1BPQ96EK5 621 aa26.63■■□□□ 1.85
LIMS2-202ENST00000355119 NUCB2P80303 420 aa26.63■■□□□ 1.85
LIMS2-202ENST00000355119 RHPN1Q8TCX5 695 aa26.63■■□□□ 1.85
LIMS2-202ENST00000355119 SSFA2P28290 1259 aa26.62■■□□□ 1.85
LIMS2-202ENST00000355119 GZF1Q9H116 711 aaPredicted RBP26.62■■□□□ 1.85
LIMS2-202ENST00000355119 HDAC5Q9UQL6 1122 aa26.62■■□□□ 1.85
LIMS2-202ENST00000355119 ERBB3P21860 1342 aa26.62■■□□□ 1.85
LIMS2-202ENST00000355119 IL1RAPL2Q9NP60 686 aa26.61■■□□□ 1.85
LIMS2-202ENST00000355119 ANXA1P04083 346 aa26.61■■□□□ 1.85
LIMS2-202ENST00000355119 RGPD5Q99666 1765 aa26.61■■□□□ 1.85
LIMS2-202ENST00000355119 EPB41L2O43491 1005 aaKnown RBP26.6■■□□□ 1.85
LIMS2-202ENST00000355119 ANAPC15P60006 121 aa26.6■■□□□ 1.85
LIMS2-202ENST00000355119 HYPKQ9NX55 129 aa26.6■■□□□ 1.85
LIMS2-202ENST00000355119 GOLGA6L22H0YM25 854 aa26.6■■□□□ 1.85
LIMS2-202ENST00000355119 KSR2Q6VAB6 950 aa26.6■■□□□ 1.85
LIMS2-202ENST00000355119 ATF3P18847 181 aa26.59■■□□□ 1.85
LIMS2-202ENST00000355119 MTX1Q13505 466 aa26.59■■□□□ 1.85
LIMS2-202ENST00000355119 MCM2P49736 904 aa26.58■■□□□ 1.85
LIMS2-202ENST00000355119 NUTM1Q86Y26 1132 aa26.58■■□□□ 1.85
LIMS2-202ENST00000355119 ISY1Q9ULR0 285 aaKnown RBP26.58■■□□□ 1.85
LIMS2-202ENST00000355119 MAP3K2Q9Y2U5 619 aa26.58■■□□□ 1.85
LIMS2-202ENST00000355119 DCCP43146 1447 aa26.58■■□□□ 1.85
LIMS2-202ENST00000355119 RAPGEF4Q8WZA2 1011 aa26.58■■□□□ 1.85
LIMS2-202ENST00000355119 ZC3H6P61129 1189 aaKnown RBP26.57■■□□□ 1.84
LIMS2-202ENST00000355119 ABCC6O95255 1503 aa26.57■■□□□ 1.84
LIMS2-202ENST00000355119 IL17RAQ96F46 866 aa26.56■■□□□ 1.84
LIMS2-202ENST00000355119 UNC5CLQ8IV45 518 aa26.56■■□□□ 1.84
LIMS2-202ENST00000355119 ANO2Q9NQ90 1003 aa26.56■■□□□ 1.84
LIMS2-202ENST00000355119 DDX58O95786 925 aaKnown RBP26.55■■□□□ 1.84
LIMS2-202ENST00000355119 PROSER3Q2NL68 480 aa26.55■■□□□ 1.84
LIMS2-202ENST00000355119 PI4K2BQ8TCG2 481 aa26.55■■□□□ 1.84
LIMS2-202ENST00000355119 C9orf78Q9NZ63 289 aaPredicted RBP26.55■■□□□ 1.84
LIMS2-202ENST00000355119 BAG4O95429 457 aaKnown RBP26.55■■□□□ 1.84
LIMS2-202ENST00000355119 CYP2E1P05181 493 aaPredicted RBP26.55■■□□□ 1.84
LIMS2-202ENST00000355119 DDX21Q9NR30 783 aaKnown RBP eCLIP26.55■■□□□ 1.84
LIMS2-202ENST00000355119 USP42Q9H9J4 1324 aaKnown RBP26.54■■□□□ 1.84
LIMS2-202ENST00000355119 PLEKHG2Q9H7P9 1386 aa26.54■■□□□ 1.84
LIMS2-202ENST00000355119 TATP17735 454 aaPredicted RBP26.54■■□□□ 1.84
LIMS2-202ENST00000355119 NEK4P51957 841 aa26.53■■□□□ 1.84
LIMS2-202ENST00000355119 SPG7Q9UQ90 795 aa26.53■■□□□ 1.84
LIMS2-202ENST00000355119 NLRP2Q9NX02 1062 aa26.53■■□□□ 1.84
LIMS2-202ENST00000355119 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.53■■□□□ 1.84
LIMS2-202ENST00000355119 TMEM94Q12767 1356 aa26.52■■□□□ 1.84
LIMS2-202ENST00000355119 SCN11AQ9UI33 1791 aa26.52■■□□□ 1.84
LIMS2-202ENST00000355119 OS9Q13438 667 aaPredicted RBP26.52■■□□□ 1.84
LIMS2-202ENST00000355119 XRCC6P12956 609 aaKnown RBP eCLIP26.51■■□□□ 1.83
LIMS2-202ENST00000355119 MRE11P49959 708 aa26.51■■□□□ 1.83
LIMS2-202ENST00000355119 CNTROBQ8N137 903 aa26.51■■□□□ 1.83
LIMS2-202ENST00000355119 LINS1Q8NG48 757 aa26.51■■□□□ 1.83
LIMS2-202ENST00000355119 TTC41PQ6P2S7 1318 aa26.51■■□□□ 1.83
LIMS2-202ENST00000355119 NPHP3Q7Z494 1330 aa26.51■■□□□ 1.83
LIMS2-202ENST00000355119 PRAMEF22A3QJZ6 481 aa26.51■■□□□ 1.83
LIMS2-202ENST00000355119 ERC1Q8IUD2 1116 aa26.51■■□□□ 1.83
LIMS2-202ENST00000355119 SLC52A2Q9HAB3 445 aa26.51■■□□□ 1.83
LIMS2-202ENST00000355119 AK9Q5TCS8 1911 aa26.51■■□□□ 1.83
LIMS2-202ENST00000355119 COL18A1P39060 1754 aa26.5■■□□□ 1.83
LIMS2-202ENST00000355119 RTN4Q9NQC3 1192 aaKnown RBP26.49■■□□□ 1.83
LIMS2-202ENST00000355119 UTYO14607 1347 aa26.49■■□□□ 1.83
LIMS2-202ENST00000355119 KDM6AO15550 1401 aaPredicted RBP26.49■■□□□ 1.83
LIMS2-202ENST00000355119 PHKG2P15735 406 aa26.49■■□□□ 1.83
LIMS2-202ENST00000355119 ZNF790Q6PG37 636 aa26.49■■□□□ 1.83
LIMS2-202ENST00000355119 PALD1Q9ULE6 856 aa26.49■■□□□ 1.83
LIMS2-202ENST00000355119 CRYBG1Q9Y4K1 1723 aa26.48■■□□□ 1.83
LIMS2-202ENST00000355119 GLRX3O76003 335 aaKnown RBP26.48■■□□□ 1.83
LIMS2-202ENST00000355119 CLASRPQ8N2M8 674 aaKnown RBP26.48■■□□□ 1.83
LIMS2-202ENST00000355119 ZGPATQ8N5A5 531 aaKnown RBP26.48■■□□□ 1.83
LIMS2-202ENST00000355119 TMX3Q96JJ7 454 aa26.48■■□□□ 1.83
LIMS2-202ENST00000355119 TNS3Q68CZ2 1445 aa26.47■■□□□ 1.83
LIMS2-202ENST00000355119 GRM8O00222 908 aa26.47■■□□□ 1.83
LIMS2-202ENST00000355119 PDIA6Q15084 440 aa26.47■■□□□ 1.83
LIMS2-202ENST00000355119 CWF19L2Q2TBE0 894 aaKnown RBP26.46■■□□□ 1.83
LIMS2-202ENST00000355119 IFNL2Q8IZJ0 200 aa26.46■■□□□ 1.83
LIMS2-202ENST00000355119 MEGF6O75095 1541 aa26.46■■□□□ 1.83
LIMS2-202ENST00000355119 HSPA4P34932 840 aa26.46■■□□□ 1.83
LIMS2-202ENST00000355119 CUL4AQ13619 759 aa26.46■■□□□ 1.83
LIMS2-202ENST00000355119 CADPS2Q86UW7 1296 aa26.46■■□□□ 1.83
LIMS2-202ENST00000355119 GPATCH3Q96I76 525 aa26.46■■□□□ 1.83
LIMS2-202ENST00000355119 STRCP1A6NGW2 1772 aa26.45■■□□□ 1.83
LIMS2-202ENST00000355119 C5P01031 1676 aa26.45■■□□□ 1.82
LIMS2-202ENST00000355119 SGSM2O43147 1006 aa26.45■■□□□ 1.82
LIMS2-202ENST00000355119 MAP4K4O95819 1239 aaPredicted RBP26.45■■□□□ 1.82
LIMS2-202ENST00000355119 KLHL40Q2TBA0 621 aa26.45■■□□□ 1.82
LIMS2-202ENST00000355119 CSB-PGBD3P0DP91 1061 aa26.44■■□□□ 1.82
LIMS2-202ENST00000355119 LARP1Q6PKG0 1096 aaKnown RBP26.44■■□□□ 1.82
LIMS2-202ENST00000355119 ARXQ96QS3 562 aa26.44■■□□□ 1.82
LIMS2-202ENST00000355119 GRPEL1Q9HAV7 217 aa26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms