RNA–Protein interactions for RNA: ENST00000354749.6

TTC3-201, Transcript of tetratricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC3, Length 9,084 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-201ENST00000354749 PAFAH1B1P43034 410 aa7.55□□□□□ -1.2
TTC3-201ENST00000354749 ESCO1Q5FWF5 840 aa7.55□□□□□ -1.2
TTC3-201ENST00000354749 SPECC1LQ69YQ0 1117 aa7.55□□□□□ -1.2
TTC3-201ENST00000354749 CEP135Q66GS9 1140 aa7.55□□□□□ -1.2
TTC3-201ENST00000354749 TMC6Q7Z403 805 aa7.55□□□□□ -1.2
TTC3-201ENST00000354749 RAI14Q9P0K7 980 aa7.55□□□□□ -1.2
TTC3-201ENST00000354749 GNAT3A8MTJ3 354 aa7.55□□□□□ -1.2
TTC3-201ENST00000354749 TBC1D9Q6ZT07 1266 aa7.55□□□□□ -1.2
TTC3-201ENST00000354749 FSIP1Q8NA03 581 aa7.55□□□□□ -1.2
TTC3-201ENST00000354749 PYM1Q9BRP8 204 aaKnown RBP7.55□□□□□ -1.2
TTC3-201ENST00000354749 PRG4Q92954 1404 aaPredicted RBP7.54□□□□□ -1.2
TTC3-201ENST00000354749 TRIM27P14373 513 aa7.54□□□□□ -1.2
TTC3-201ENST00000354749 ZNF165P49910 485 aa7.54□□□□□ -1.2
TTC3-201ENST00000354749 RAB34Q9BZG1 259 aa7.54□□□□□ -1.2
TTC3-201ENST00000354749 MAP3K1Q13233 1512 aa7.54□□□□□ -1.2
TTC3-201ENST00000354749 POLR3GO15318 223 aaPredicted RBP7.54□□□□□ -1.2
TTC3-201ENST00000354749 HMG20BQ9P0W2 317 aa7.54□□□□□ -1.2
TTC3-201ENST00000354749 PTPN23Q9H3S7 1636 aa7.54□□□□□ -1.2
TTC3-201ENST00000354749 GOLGA8BA8MQT2 603 aa7.54□□□□□ -1.2
TTC3-201ENST00000354749 ATP2B2Q01814 1243 aa7.54□□□□□ -1.2
TTC3-201ENST00000354749 CACNA2D4Q7Z3S7 1137 aa7.54□□□□□ -1.2
TTC3-201ENST00000354749 EPRSP07814 1512 aaKnown RBP7.54□□□□□ -1.2
TTC3-201ENST00000354749 KLHL10Q6JEL2 608 aa7.54□□□□□ -1.2
TTC3-201ENST00000354749 LRSAM1Q6UWE0 723 aa7.54□□□□□ -1.2
TTC3-201ENST00000354749 CEP112Q8N8E3 955 aa7.54□□□□□ -1.2
TTC3-201ENST00000354749 TAOK3Q9H2K8 898 aa7.54□□□□□ -1.2
TTC3-201ENST00000354749 PTPRCP08575 1304 aa7.54□□□□□ -1.2
TTC3-201ENST00000354749 IDH1O75874 414 aaKnown RBP7.54□□□□□ -1.2
TTC3-201ENST00000354749 DUSP27Q5VZP5 1158 aa7.54□□□□□ -1.2
TTC3-201ENST00000354749 FAM114A1Q8IWE2 563 aa7.54□□□□□ -1.2
TTC3-201ENST00000354749 FAM200AQ8TCP9 573 aa7.54□□□□□ -1.2
TTC3-201ENST00000354749 CCDC178Q5BJE1 867 aa7.54□□□□□ -1.2
TTC3-201ENST00000354749 STK11IPQ8N1F8 1099 aa7.54□□□□□ -1.2
TTC3-201ENST00000354749 MYL6BP14649 208 aa7.54□□□□□ -1.2
TTC3-201ENST00000354749 LMAN1P49257 510 aa7.54□□□□□ -1.2
TTC3-201ENST00000354749 RNF187Q5TA31 235 aaPredicted RBP7.54□□□□□ -1.2
TTC3-201ENST00000354749 TXNDC2Q86VQ3 553 aa7.54□□□□□ -1.2
TTC3-201ENST00000354749 ZHX1Q9UKY1 873 aaPredicted RBP7.54□□□□□ -1.2
TTC3-201ENST00000354749 TTC22Q5TAA0 569 aa7.53□□□□□ -1.2
TTC3-201ENST00000354749 KRI1Q8N9T8 703 aaKnown RBP7.53□□□□□ -1.2
TTC3-201ENST00000354749 SRRTQ9BXP5 876 aaKnown RBP7.53□□□□□ -1.2
TTC3-201ENST00000354749 CCDC113Q9H0I3 377 aa7.53□□□□□ -1.2
TTC3-201ENST00000354749 PCF11O94913 1555 aaKnown RBP7.53□□□□□ -1.2
TTC3-201ENST00000354749 GSTTP1A0A1W2PQM5 241 aa7.53□□□□□ -1.2
TTC3-201ENST00000354749 GJB2P29033 226 aa7.53□□□□□ -1.2
TTC3-201ENST00000354749 LRP2BPQ9P2M1 347 aa7.53□□□□□ -1.2
TTC3-201ENST00000354749 SLC12A7Q9Y666 1083 aa7.53□□□□□ -1.2
TTC3-201ENST00000354749 CAMSAP2Q08AD1 1489 aa7.53□□□□□ -1.2
TTC3-201ENST00000354749 TMEM266Q2M3C6 531 aa7.53□□□□□ -1.2
TTC3-201ENST00000354749 CNNM3Q8NE01 707 aa7.53□□□□□ -1.2
TTC3-201ENST00000354749 CTCFLQ8NI51 663 aaPredicted RBP7.53□□□□□ -1.2
TTC3-201ENST00000354749 TRIM21P19474 475 aaKnown RBP7.53□□□□□ -1.2
TTC3-201ENST00000354749 IGHMBP2P38935 993 aaKnown RBP7.53□□□□□ -1.2
TTC3-201ENST00000354749 OSCARQ8IYS5 282 aa7.53□□□□□ -1.2
TTC3-201ENST00000354749 RNF41Q9H4P4 317 aaPredicted RBP7.53□□□□□ -1.2
TTC3-201ENST00000354749 GOLIM4O00461 696 aa7.53□□□□□ -1.2
TTC3-201ENST00000354749 MEX3CQ5U5Q3 659 aaKnown RBP7.53□□□□□ -1.2
TTC3-201ENST00000354749 BBXQ8WY36 941 aaPredicted RBP7.53□□□□□ -1.2
TTC3-201ENST00000354749 FAM177BA6PVY3 158 aa7.53□□□□□ -1.2
TTC3-201ENST00000354749 SMARCA5O60264 1052 aaPredicted RBP7.53□□□□□ -1.2
TTC3-201ENST00000354749 RRS1Q15050 365 aaKnown RBP7.53□□□□□ -1.2
TTC3-201ENST00000354749 LARP1Q6PKG0 1096 aaKnown RBP7.53□□□□□ -1.2
TTC3-201ENST00000354749 EVI5LQ96CN4 794 aa7.52□□□□□ -1.2
TTC3-201ENST00000354749 TRMT1Q9NXH9 659 aaKnown RBP7.52□□□□□ -1.2
TTC3-201ENST00000354749 IL16Q14005 1332 aa7.52□□□□□ -1.2
TTC3-201ENST00000354749 XRCC6P12956 609 aaKnown RBP eCLIP7.52□□□□□ -1.21
TTC3-201ENST00000354749 SSR1P43307 286 aaKnown RBP7.52□□□□□ -1.21
TTC3-201ENST00000354749 CCDC194A0A1B0GVG4 234 aa7.52□□□□□ -1.21
TTC3-201ENST00000354749 ZNF76P36508 570 aa7.52□□□□□ -1.21
TTC3-201ENST00000354749 KANK3Q6NY19 840 aa7.52□□□□□ -1.21
TTC3-201ENST00000354749 CCDC12Q8WUD4 166 aaPredicted RBP7.52□□□□□ -1.21
TTC3-201ENST00000354749 HDAC1Q13547 482 aaPredicted RBP7.52□□□□□ -1.21
TTC3-201ENST00000354749 CKAP4Q07065 602 aaKnown RBP7.52□□□□□ -1.21
TTC3-201ENST00000354749 CCDC94Q9BW85 323 aaPredicted RBP7.52□□□□□ -1.21
TTC3-201ENST00000354749 NAPBQ9H115 298 aa7.52□□□□□ -1.21
TTC3-201ENST00000354749 ECHDC1Q9NTX5 307 aa7.52□□□□□ -1.21
TTC3-201ENST00000354749 STAMBPO95630 424 aa7.52□□□□□ -1.21
TTC3-201ENST00000354749 GNG11P61952 73 aa7.52□□□□□ -1.21
TTC3-201ENST00000354749 ZSCAN16Q9H4T2 348 aaPredicted RBP7.52□□□□□ -1.21
TTC3-201ENST00000354749 MAATS1Q7Z4T9 603 aa7.51□□□□□ -1.21
TTC3-201ENST00000354749 HCLS1P14317 486 aaPredicted RBP7.51□□□□□ -1.21
TTC3-201ENST00000354749 NF2P35240 595 aa7.51□□□□□ -1.21
TTC3-201ENST00000354749 TNIP1Q15025 636 aa7.51□□□□□ -1.21
TTC3-201ENST00000354749 MCM10Q7L590 875 aa7.51□□□□□ -1.21
TTC3-201ENST00000354749 HOOK3Q86VS8 718 aa7.51□□□□□ -1.21
TTC3-201ENST00000354749 ZKSCAN5Q9Y2L8 839 aa7.51□□□□□ -1.21
TTC3-201ENST00000354749 FAM69CQ0P6D2 419 aa7.51□□□□□ -1.21
TTC3-201ENST00000354749 CTAGE1Q96RT6 745 aa7.51□□□□□ -1.21
TTC3-201ENST00000354749 ZMYND15Q9H091 742 aa7.51□□□□□ -1.21
TTC3-201ENST00000354749 SCAF11Q99590 1463 aaKnown RBP7.51□□□□□ -1.21
TTC3-201ENST00000354749 ZSCAN22P10073 491 aaPredicted RBP7.51□□□□□ -1.21
TTC3-201ENST00000354749 SKILP12757 684 aa7.51□□□□□ -1.21
TTC3-201ENST00000354749 NOLC1Q14978 699 aaKnown RBP eCLIP7.51□□□□□ -1.213e-6■□□□□ 8.5
TTC3-201ENST00000354749 TDRD12Q587J7 1177 aaKnown RBP7.51□□□□□ -1.21
TTC3-201ENST00000354749 DNAAF4Q8WXU2 420 aa7.51□□□□□ -1.21
TTC3-201ENST00000354749 GOPCQ9HD26 462 aa7.51□□□□□ -1.21
TTC3-201ENST00000354749 IFT140Q96RY7 1462 aa7.51□□□□□ -1.21
TTC3-201ENST00000354749 C11orf95C9JLR9 678 aaPredicted RBP7.51□□□□□ -1.21
TTC3-201ENST00000354749 ANAPC15P60006 121 aa7.51□□□□□ -1.21
TTC3-201ENST00000354749 TUBB4BP68371 445 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms