RNA–Protein interactions for RNA: ENST00000352957.8

MRPL39-202, Transcript of mitochondrial ribosomal protein L39, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MRPL39, Length 1,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL39-202ENST00000352957 TMPOP42166 694 aaKnown RBP27.47■■□□□ 1.99
MRPL39-202ENST00000352957 RIPK4P57078 832 aa27.47■■□□□ 1.99
MRPL39-202ENST00000352957 NLGN2Q8NFZ4 835 aa27.47■■□□□ 1.99
MRPL39-202ENST00000352957 TEX13AQ9BXU3 409 aaPredicted RBP27.47■■□□□ 1.99
MRPL39-202ENST00000352957 MIS18AQ9NYP9 233 aa27.47■■□□□ 1.99
MRPL39-202ENST00000352957 USP42Q9H9J4 1324 aaKnown RBP27.46■■□□□ 1.99
MRPL39-202ENST00000352957 MMP10P09238 476 aa27.46■■□□□ 1.99
MRPL39-202ENST00000352957 NLGN1Q8N2Q7 840 aa27.46■■□□□ 1.99
MRPL39-202ENST00000352957 COL15A1P39059 1388 aa27.46■■□□□ 1.99
MRPL39-202ENST00000352957 DCAF8L1A6NGE4 600 aa27.45■■□□□ 1.98
MRPL39-202ENST00000352957 CANXP27824 592 aaKnown RBP27.45■■□□□ 1.98
MRPL39-202ENST00000352957 RUNDC1Q96C34 613 aa27.45■■□□□ 1.98
MRPL39-202ENST00000352957 RRP7AQ9Y3A4 280 aaKnown RBP27.44■■□□□ 1.98
MRPL39-202ENST00000352957 PRAMEF22A3QJZ6 481 aa27.43■■□□□ 1.98
MRPL39-202ENST00000352957 CCDC184Q52MB2 194 aa27.42■■□□□ 1.98
MRPL39-202ENST00000352957 LAMB4A4D0S4 1761 aa27.42■■□□□ 1.98
MRPL39-202ENST00000352957 NEUROD2Q15784 382 aa27.41■■□□□ 1.98
MRPL39-202ENST00000352957 PNISRQ8TF01 805 aaKnown RBP27.41■■□□□ 1.98
MRPL39-202ENST00000352957 CD2APQ9Y5K6 639 aa27.41■■□□□ 1.98
MRPL39-202ENST00000352957 USP16Q9Y5T5 823 aa27.41■■□□□ 1.98
MRPL39-202ENST00000352957 KIF13BQ9NQT8 1826 aa27.4■■□□□ 1.98
MRPL39-202ENST00000352957 ANP32CO43423 234 aa27.4■■□□□ 1.98
MRPL39-202ENST00000352957 ZPR1O75312 459 aa27.4■■□□□ 1.98
MRPL39-202ENST00000352957 SNRPA1P09661 255 aaKnown RBP27.4■■□□□ 1.98
MRPL39-202ENST00000352957 FKBP8Q14318 412 aa27.4■■□□□ 1.98
MRPL39-202ENST00000352957 USPL1Q5W0Q7 1092 aa27.4■■□□□ 1.98
MRPL39-202ENST00000352957 A1BGP04217 495 aa27.39■■□□□ 1.98
MRPL39-202ENST00000352957 EIF5P55010 431 aaKnown RBP27.39■■□□□ 1.98
MRPL39-202ENST00000352957 LMOD3Q0VAK6 560 aa27.39■■□□□ 1.98
MRPL39-202ENST00000352957 NARFQ9UHQ1 456 aa27.38■■□□□ 1.97
MRPL39-202ENST00000352957 SCN7AQ01118 1682 aa27.37■■□□□ 1.97
MRPL39-202ENST00000352957 ZNF330Q9Y3S2 320 aaPredicted RBP27.37■■□□□ 1.97
MRPL39-202ENST00000352957 PARP3Q9Y6F1 533 aa27.36■■□□□ 1.97
MRPL39-202ENST00000352957 IL6STP40189 918 aaPredicted RBP27.35■■□□□ 1.97
MRPL39-202ENST00000352957 EIF4A1P60842 406 aaKnown RBP27.35■■□□□ 1.97
MRPL39-202ENST00000352957 TRIM35Q9UPQ4 493 aa27.35■■□□□ 1.97
MRPL39-202ENST00000352957 KIAA1551Q9HCM1 1747 aa27.34■■□□□ 1.97
MRPL39-202ENST00000352957 A0A087WZG4 1122 aa27.34■■□□□ 1.97
MRPL39-202ENST00000352957 PIP4K2AP48426 406 aaPredicted RBP27.34■■□□□ 1.97
MRPL39-202ENST00000352957 GPR162Q16538 588 aa27.34■■□□□ 1.97
MRPL39-202ENST00000352957 PELP1Q8IZL8 1130 aaKnown RBP27.34■■□□□ 1.97
MRPL39-202ENST00000352957 BCORQ6W2J9 1755 aa27.33■■□□□ 1.97
MRPL39-202ENST00000352957 N4BP2Q86UW6 1770 aaPredicted RBP27.33■■□□□ 1.97
MRPL39-202ENST00000352957 DDR1Q08345 913 aa27.33■■□□□ 1.97
MRPL39-202ENST00000352957 BCL2L12Q9HB09 334 aa27.33■■□□□ 1.97
MRPL39-202ENST00000352957 TSPYL4Q9UJ04 414 aa27.33■■□□□ 1.97
MRPL39-202ENST00000352957 C10orf71Q711Q0 1435 aa27.33■■□□□ 1.96
MRPL39-202ENST00000352957 AFDNP55196 1824 aaKnown RBP27.32■■□□□ 1.96
MRPL39-202ENST00000352957 GIGYF1O75420 1035 aaPredicted RBP27.31■■□□□ 1.96
MRPL39-202ENST00000352957 TM4SF1P30408 202 aa27.31■■□□□ 1.96
MRPL39-202ENST00000352957 TBC1D2BQ9UPU7 963 aa27.31■■□□□ 1.96
MRPL39-202ENST00000352957 POLRMTO00411 1230 aaKnown RBP27.29■■□□□ 1.96
MRPL39-202ENST00000352957 APAF1O14727 1248 aa27.29■■□□□ 1.96
MRPL39-202ENST00000352957 NFIXQ14938 502 aa27.29■■□□□ 1.96
MRPL39-202ENST00000352957 NPM2Q86SE8 214 aaKnown RBP27.29■■□□□ 1.96
MRPL39-202ENST00000352957 MRS2Q9HD23 443 aa27.29■■□□□ 1.96
MRPL39-202ENST00000352957 CHD4Q14839 1912 aa27.29■■□□□ 1.96
MRPL39-202ENST00000352957 NRXN2Q9P2S2 1712 aa27.28■■□□□ 1.96
MRPL39-202ENST00000352957 NBPF26B4DH59 902 aa27.28■■□□□ 1.96
MRPL39-202ENST00000352957 NBPF10Q6P3W6 841 aaKnown RBP27.28■■□□□ 1.96
MRPL39-202ENST00000352957 NBPF15Q8N660 670 aa27.28■■□□□ 1.96
MRPL39-202ENST00000352957 BABAM1Q9NWV8 329 aa27.28■■□□□ 1.96
MRPL39-202ENST00000352957 PXDNLA1KZ92 1463 aa27.27■■□□□ 1.96
MRPL39-202ENST00000352957 YBX3P16989 372 aaKnown RBP eCLIP27.27■■□□□ 1.96
MRPL39-202ENST00000352957 DZIP3Q86Y13 1208 aaKnown RBP27.26■■□□□ 1.95
MRPL39-202ENST00000352957 CAMTA2O94983 1202 aa27.25■■□□□ 1.95
MRPL39-202ENST00000352957 WWC3Q9ULE0 1092 aa27.25■■□□□ 1.95
MRPL39-202ENST00000352957 LAS1LQ9Y4W2 734 aaKnown RBP27.25■■□□□ 1.95
MRPL39-202ENST00000352957 BICDL1Q6ZP65 573 aa27.24■■□□□ 1.95
MRPL39-202ENST00000352957 CHL1O00533 1208 aa27.23■■□□□ 1.95
MRPL39-202ENST00000352957 TGFB2P61812 414 aa27.23■■□□□ 1.95
MRPL39-202ENST00000352957 TBC1D9BQ66K14 1250 aa27.23■■□□□ 1.95
MRPL39-202ENST00000352957 BRCA1P38398 1863 aaKnown RBP27.23■■□□□ 1.95
MRPL39-202ENST00000352957 YY1P25490 414 aa27.22■■□□□ 1.95
MRPL39-202ENST00000352957 A0A0G2JLW4 131 aa27.21■■□□□ 1.95
MRPL39-202ENST00000352957 SERPINB2P05120 415 aa27.21■■□□□ 1.95
MRPL39-202ENST00000352957 DPEP1P16444 411 aa27.19■■□□□ 1.94
MRPL39-202ENST00000352957 NGEFQ8N5V2 710 aa27.18■■□□□ 1.94
MRPL39-202ENST00000352957 GOLGB1Q14789 3259 aaKnown RBP27.17■■□□□ 1.94
MRPL39-202ENST00000352957 SENP3-EIF4A1A0A087X0R7 540 aa27.17■■□□□ 1.94
MRPL39-202ENST00000352957 GRIN3BO60391 1043 aa27.17■■□□□ 1.94
MRPL39-202ENST00000352957 MYL6BP14649 208 aa27.17■■□□□ 1.94
MRPL39-202ENST00000352957 KRT24Q2M2I5 525 aa27.17■■□□□ 1.94
MRPL39-202ENST00000352957 CFAP44Q96MT7 982 aa27.17■■□□□ 1.94
MRPL39-202ENST00000352957 EIF2S2P20042 333 aaKnown RBP27.16■■□□□ 1.94
MRPL39-202ENST00000352957 CARMIL3Q8ND23 1372 aa27.16■■□□□ 1.94
MRPL39-202ENST00000352957 ANKRD31Q8N7Z5 1873 aa27.16■■□□□ 1.94
MRPL39-202ENST00000352957 NUP98P52948 1817 aa27.16■■□□□ 1.94
MRPL39-202ENST00000352957 ERBB4Q15303 1308 aa27.15■■□□□ 1.94
MRPL39-202ENST00000352957 KCNA3P22001 575 aa27.14■■□□□ 1.94
MRPL39-202ENST00000352957 CLEC4GQ6UXB4 293 aa27.14■■□□□ 1.94
MRPL39-202ENST00000352957 SETDB2Q96T68 719 aa27.14■■□□□ 1.94
MRPL39-202ENST00000352957 MBIPQ9NS73 344 aa27.14■■□□□ 1.94
MRPL39-202ENST00000352957 ZNF652Q9Y2D9 606 aa27.14■■□□□ 1.94
MRPL39-202ENST00000352957 UTRNP46939 3433 aa27.14■■□□□ 1.93
MRPL39-202ENST00000352957 DLEC1Q9Y238 1755 aa27.14■■□□□ 1.93
MRPL39-202ENST00000352957 ZNF853P0CG23 659 aa27.13■■□□□ 1.93
MRPL39-202ENST00000352957 CHRNA5P30532 468 aa27.13■■□□□ 1.93
MRPL39-202ENST00000352957 CALD1Q05682 793 aaKnown RBP27.13■■□□□ 1.93
MRPL39-202ENST00000352957 ARFGEF1Q9Y6D6 1849 aa27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms