RNA–Protein interactions for RNA: ENST00000351097.9

USP25-203, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 2,158 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-203ENST00000351097 DDX11L8A8MPP1 907 aa29.18■■■□□ 2.26
USP25-203ENST00000351097 ANXA1P04083 346 aa29.18■■■□□ 2.26
USP25-203ENST00000351097 GNAI3P08754 354 aa29.18■■■□□ 2.26
USP25-203ENST00000351097 SLC39A6Q13433 755 aa29.17■■■□□ 2.26
USP25-203ENST00000351097 TTC22Q5TAA0 569 aa29.17■■■□□ 2.26
USP25-203ENST00000351097 MRC1P22897 1456 aa29.17■■■□□ 2.26
USP25-203ENST00000351097 TRAK2O60296 914 aa29.16■■■□□ 2.26
USP25-203ENST00000351097 USP44Q9H0E7 712 aa29.15■■■□□ 2.26
USP25-203ENST00000351097 HMMRO75330 724 aa29.14■■■□□ 2.26
USP25-203ENST00000351097 PI4KAP2A4QPH2 592 aa29.13■■■□□ 2.25
USP25-203ENST00000351097 K7ELQ4 463 aaPredicted RBP29.13■■■□□ 2.25
USP25-203ENST00000351097 PROSER3Q2NL68 480 aa29.13■■■□□ 2.25
USP25-203ENST00000351097 PI4KAP1Q8N8J0 262 aa29.13■■■□□ 2.25
USP25-203ENST00000351097 CARD10Q9BWT7 1032 aa29.13■■■□□ 2.25
USP25-203ENST00000351097 PARP4Q9UKK3 1724 aaKnown RBP29.13■■■□□ 2.25
USP25-203ENST00000351097 DNAAF4Q8WXU2 420 aa29.12■■■□□ 2.25
USP25-203ENST00000351097 SRCIN1Q9C0H9 1055 aa29.12■■■□□ 2.25
USP25-203ENST00000351097 ADCY9O60503 1353 aa29.12■■■□□ 2.25
USP25-203ENST00000351097 CD2BP2O95400 341 aaKnown RBP29.12■■■□□ 2.25
USP25-203ENST00000351097 C16orf71Q8IYS4 520 aaPredicted RBP29.12■■■□□ 2.25
USP25-203ENST00000351097 FSD2A1L4K1 749 aa29.11■■■□□ 2.25
USP25-203ENST00000351097 GOLGA6L3A6NEY3 463 aa29.11■■■□□ 2.25
USP25-203ENST00000351097 BEND3Q5T5X7 828 aa29.11■■■□□ 2.25
USP25-203ENST00000351097 LARP1Q6PKG0 1096 aaKnown RBP29.11■■■□□ 2.25
USP25-203ENST00000351097 STRN4Q9NRL3 753 aa29.11■■■□□ 2.25
USP25-203ENST00000351097 ZCRB1Q8TBF4 217 aaKnown RBP29.1■■■□□ 2.25
USP25-203ENST00000351097 HSP90AA1P07900 732 aaKnown RBP29.09■■■□□ 2.25
USP25-203ENST00000351097 RAB3GAP1Q15042 981 aa29.09■■■□□ 2.25
USP25-203ENST00000351097 TNPO1Q92973 898 aaKnown RBP29.09■■■□□ 2.25
USP25-203ENST00000351097 LRRFIP2Q9Y608 721 aaKnown RBP29.09■■■□□ 2.25
USP25-203ENST00000351097 PCDH11XQ9BZA7 1347 aa29.09■■■□□ 2.25
USP25-203ENST00000351097 PCDH11YQ9BZA8 1340 aa29.09■■■□□ 2.25
USP25-203ENST00000351097 RBM42Q9BTD8 480 aaKnown RBP29.09■■■□□ 2.25
USP25-203ENST00000351097 GZF1Q9H116 711 aaPredicted RBP29.09■■■□□ 2.25
USP25-203ENST00000351097 ZNF496Q96IT1 587 aaPredicted RBP29.08■■■□□ 2.25
USP25-203ENST00000351097 UBTFL1P0CB47 393 aaPredicted RBP29.08■■■□□ 2.25
USP25-203ENST00000351097 IL2RBP14784 551 aa29.08■■■□□ 2.25
USP25-203ENST00000351097 HYPKQ9NX55 129 aa29.08■■■□□ 2.25
USP25-203ENST00000351097 ROBO1Q9Y6N7 1651 aa29.07■■■□□ 2.24
USP25-203ENST00000351097 EVA1CP58658 441 aa29.07■■■□□ 2.24
USP25-203ENST00000351097 ATP8B2P98198 1209 aa29.07■■■□□ 2.24
USP25-203ENST00000351097 PDIA6Q15084 440 aa29.07■■■□□ 2.24
USP25-203ENST00000351097 GBP4Q96PP9 640 aa29.07■■■□□ 2.24
USP25-203ENST00000351097 DDX21Q9NR30 783 aaKnown RBP eCLIP29.07■■■□□ 2.24
USP25-203ENST00000351097 PNMA6EA0A0J9YXQ4 647 aa29.06■■■□□ 2.24
USP25-203ENST00000351097 CABP4P57796 275 aa29.06■■■□□ 2.24
USP25-203ENST00000351097 OTUD7AQ8TE49 926 aaPredicted RBP29.06■■■□□ 2.24
USP25-203ENST00000351097 C5P01031 1676 aa29.06■■■□□ 2.24
USP25-203ENST00000351097 FAM43AQ8N2R8 423 aa29.06■■■□□ 2.24
USP25-203ENST00000351097 APBB1O00213 710 aa29.05■■■□□ 2.24
USP25-203ENST00000351097 SMARCA5O60264 1052 aaPredicted RBP29.05■■■□□ 2.24
USP25-203ENST00000351097 RABEP1Q15276 862 aa29.05■■■□□ 2.24
USP25-203ENST00000351097 TTC5Q8N0Z6 440 aa29.05■■■□□ 2.24
USP25-203ENST00000351097 LTBP4Q8N2S1 1624 aa29.05■■■□□ 2.24
USP25-203ENST00000351097 KSR2Q6VAB6 950 aa29.04■■■□□ 2.24
USP25-203ENST00000351097 MAP3K2Q9Y2U5 619 aa29.04■■■□□ 2.24
USP25-203ENST00000351097 SDSP20132 328 aa29.03■■■□□ 2.24
USP25-203ENST00000351097 CASC1Q6TDU7 716 aa29.03■■■□□ 2.24
USP25-203ENST00000351097 NBPF7P0C2Y1 421 aaPredicted RBP29.02■■■□□ 2.24
USP25-203ENST00000351097 USP26Q9BXU7 913 aa29.02■■■□□ 2.24
USP25-203ENST00000351097 AHDC1Q5TGY3 1603 aaPredicted RBP29.02■■■□□ 2.24
USP25-203ENST00000351097 XRCC6P12956 609 aaKnown RBP eCLIP29.02■■■□□ 2.246e-6■■■■■ 31.4
USP25-203ENST00000351097 SNRPA1P09661 255 aaKnown RBP29.01■■■□□ 2.23
USP25-203ENST00000351097 FMNL2Q96PY5 1086 aa29.01■■■□□ 2.23
USP25-203ENST00000351097 EXOC6BQ9Y2D4 811 aa29.01■■■□□ 2.23
USP25-203ENST00000351097 PTMSP20962 102 aa29.01■■■□□ 2.23
USP25-203ENST00000351097 NKX1-1Q15270 411 aaPredicted RBP29.01■■■□□ 2.23
USP25-203ENST00000351097 FOXD4L1Q9NU39 408 aa29.01■■■□□ 2.23
USP25-203ENST00000351097 BTG4Q9NY30 223 aa29.01■■■□□ 2.23
USP25-203ENST00000351097 USP16Q9Y5T5 823 aa28.99■■■□□ 2.23
USP25-203ENST00000351097 SHANK3Q9BYB0 1731 aa28.98■■■□□ 2.23
USP25-203ENST00000351097 ERVV-2B6SEH9 535 aa28.98■■■□□ 2.23
USP25-203ENST00000351097 DDX54Q8TDD1 881 aaKnown RBP28.98■■■□□ 2.23
USP25-203ENST00000351097 SSH3Q8TE77 659 aa28.98■■■□□ 2.23
USP25-203ENST00000351097 GLI3P10071 1580 aa28.97■■■□□ 2.23
USP25-203ENST00000351097 ALDH1L1O75891 902 aa28.97■■■□□ 2.23
USP25-203ENST00000351097 AIMP1Q12904 312 aaKnown RBP28.97■■■□□ 2.23
USP25-203ENST00000351097 ARXQ96QS3 562 aa28.97■■■□□ 2.23
USP25-203ENST00000351097 DDX58O95786 925 aaKnown RBP28.96■■■□□ 2.23
USP25-203ENST00000351097 ISY1Q9ULR0 285 aaKnown RBP28.96■■■□□ 2.23
USP25-203ENST00000351097 IBTKQ9P2D0 1353 aaPredicted RBP28.96■■■□□ 2.23
USP25-203ENST00000351097 MYL6BP14649 208 aa28.96■■■□□ 2.23
USP25-203ENST00000351097 SKOR2Q2VWA4 1001 aaPredicted RBP28.96■■■□□ 2.23
USP25-203ENST00000351097 OSBPL3Q9H4L5 887 aa28.96■■■□□ 2.23
USP25-203ENST00000351097 COL22A1Q8NFW1 1626 aaPredicted RBP28.95■■■□□ 2.23
USP25-203ENST00000351097 MRE11P49959 708 aa28.95■■■□□ 2.22
USP25-203ENST00000351097 LRP10Q7Z4F1 713 aa28.95■■■□□ 2.22
USP25-203ENST00000351097 PPP1R42Q7Z4L9 355 aa28.95■■■□□ 2.22
USP25-203ENST00000351097 CWF19L2Q2TBE0 894 aaKnown RBP28.94■■■□□ 2.22
USP25-203ENST00000351097 POLA2Q14181 598 aa28.94■■■□□ 2.22
USP25-203ENST00000351097 LRRCC1Q9C099 1032 aa28.94■■■□□ 2.22
USP25-203ENST00000351097 COL14A1Q05707 1796 aaKnown RBP28.93■■■□□ 2.22
USP25-203ENST00000351097 REC8O95072 547 aa28.93■■■□□ 2.22
USP25-203ENST00000351097 LINS1Q8NG48 757 aa28.93■■■□□ 2.22
USP25-203ENST00000351097 XAGE3Q8WTP9 111 aa28.92■■■□□ 2.22
USP25-203ENST00000351097 PDE1AP54750 535 aa28.92■■■□□ 2.22
USP25-203ENST00000351097 CLEC17AQ6ZS10 378 aa28.92■■■□□ 2.22
USP25-203ENST00000351097 COPS6Q7L5N1 327 aa28.91■■■□□ 2.22
USP25-203ENST00000351097 COL16A1Q07092 1604 aaPredicted RBP28.91■■■□□ 2.22
USP25-203ENST00000351097 SSFA2P28290 1259 aa28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms