RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 KDM3BQ7LBC6 1761 aa18.85■□□□□ 0.61
TNFSF13-202ENST00000349228 NEK4P51957 841 aa18.84■□□□□ 0.61
TNFSF13-202ENST00000349228 C1orf141Q5JVX7 400 aa18.84■□□□□ 0.61
TNFSF13-202ENST00000349228 INTS4Q96HW7 963 aaKnown RBP18.84■□□□□ 0.61
TNFSF13-202ENST00000349228 DBF4Q9UBU7 674 aaPredicted RBP18.84■□□□□ 0.61
TNFSF13-202ENST00000349228 LMTK3Q96Q04 1460 aa18.84■□□□□ 0.61
TNFSF13-202ENST00000349228 SURF6O75683 361 aaKnown RBP18.84■□□□□ 0.61
TNFSF13-202ENST00000349228 EIF2S2P20042 333 aaKnown RBP18.84■□□□□ 0.61
TNFSF13-202ENST00000349228 RHPN1Q8TCX5 695 aa18.84■□□□□ 0.61
TNFSF13-202ENST00000349228 SLIT3O75094 1523 aa18.84■□□□□ 0.61
TNFSF13-202ENST00000349228 RNMTO43148 476 aaKnown RBP18.83■□□□□ 0.61
TNFSF13-202ENST00000349228 ALDH1L1O75891 902 aa18.83■□□□□ 0.61
TNFSF13-202ENST00000349228 GCP02774 474 aa18.83■□□□□ 0.61
TNFSF13-202ENST00000349228 CUL4AQ13619 759 aa18.83■□□□□ 0.61
TNFSF13-202ENST00000349228 CHPF2Q9P2E5 772 aa18.83■□□□□ 0.61
TNFSF13-202ENST00000349228 TUBGCP6Q96RT7 1819 aa18.83■□□□□ 0.61
TNFSF13-202ENST00000349228 MTX1Q13505 466 aa18.83■□□□□ 0.6
TNFSF13-202ENST00000349228 ANO2Q9NQ90 1003 aa18.82■□□□□ 0.6
TNFSF13-202ENST00000349228 USP42Q9H9J4 1324 aaKnown RBP18.82■□□□□ 0.6
TNFSF13-202ENST00000349228 PI4KAP2A4QPH2 592 aa18.81■□□□□ 0.6
TNFSF13-202ENST00000349228 SRGAP3O43295 1099 aa18.81■□□□□ 0.6
TNFSF13-202ENST00000349228 PI4KAP1Q8N8J0 262 aa18.81■□□□□ 0.6
TNFSF13-202ENST00000349228 TMX3Q96JJ7 454 aa18.81■□□□□ 0.6
TNFSF13-202ENST00000349228 PANK2Q9BZ23 570 aa18.81■□□□□ 0.6
TNFSF13-202ENST00000349228 MCTP1Q6DN14 999 aa18.81■□□□□ 0.6
TNFSF13-202ENST00000349228 TSHZ3Q63HK5 1081 aa18.8■□□□□ 0.6
TNFSF13-202ENST00000349228 CNTROBQ8N137 903 aa18.8■□□□□ 0.6
TNFSF13-202ENST00000349228 LMBRD1Q9NUN5 540 aa18.8■□□□□ 0.6
TNFSF13-202ENST00000349228 TTC41PQ6P2S7 1318 aa18.8■□□□□ 0.6
TNFSF13-202ENST00000349228 HEG1Q9ULI3 1381 aa18.8■□□□□ 0.6
TNFSF13-202ENST00000349228 NPHP4O75161 1426 aaPredicted RBP18.8■□□□□ 0.6
TNFSF13-202ENST00000349228 ZNF445P59923 1031 aa18.79■□□□□ 0.6
TNFSF13-202ENST00000349228 GAS2L3Q86XJ1 694 aa18.79■□□□□ 0.6
TNFSF13-202ENST00000349228 ZGPATQ8N5A5 531 aaKnown RBP18.79■□□□□ 0.6
TNFSF13-202ENST00000349228 PI4K2BQ8TCG2 481 aa18.79■□□□□ 0.6
TNFSF13-202ENST00000349228 IL1RAPL2Q9NP60 686 aa18.79■□□□□ 0.6
TNFSF13-202ENST00000349228 HYPKQ9NX55 129 aa18.79■□□□□ 0.6
TNFSF13-202ENST00000349228 MST1RQ04912 1400 aa18.78■□□□□ 0.6
TNFSF13-202ENST00000349228 NBPF7P0C2Y1 421 aaPredicted RBP18.78■□□□□ 0.6
TNFSF13-202ENST00000349228 HSPA4P34932 840 aa18.78■□□□□ 0.6
TNFSF13-202ENST00000349228 ERC1Q8IUD2 1116 aa18.78■□□□□ 0.6
TNFSF13-202ENST00000349228 ANKRD24Q8TF21 1146 aa18.78■□□□□ 0.6
TNFSF13-202ENST00000349228 ADCY9O60503 1353 aa18.78■□□□□ 0.6
TNFSF13-202ENST00000349228 GIGYF1O75420 1035 aaPredicted RBP18.78■□□□□ 0.6
TNFSF13-202ENST00000349228 KSR2Q6VAB6 950 aa18.78■□□□□ 0.6
TNFSF13-202ENST00000349228 MPRIPQ6WCQ1 1025 aa18.78■□□□□ 0.6
TNFSF13-202ENST00000349228 LRRC59Q96AG4 307 aaKnown RBP18.78■□□□□ 0.6
TNFSF13-202ENST00000349228 GLRX3O76003 335 aaKnown RBP18.77■□□□□ 0.6
TNFSF13-202ENST00000349228 ZBTB7CA1YPR0 619 aa18.76■□□□□ 0.59
TNFSF13-202ENST00000349228 KCNQ3O43525 872 aa18.76■□□□□ 0.59
TNFSF13-202ENST00000349228 NUTM1Q86Y26 1132 aa18.76■□□□□ 0.59
TNFSF13-202ENST00000349228 UNC5CLQ8IV45 518 aa18.76■□□□□ 0.59
TNFSF13-202ENST00000349228 ANP32BQ92688 251 aaKnown RBP18.76■□□□□ 0.59
TNFSF13-202ENST00000349228 ZDHHC9Q9Y397 364 aa18.76■□□□□ 0.59
TNFSF13-202ENST00000349228 SGSM2O43147 1006 aa18.76■□□□□ 0.59
TNFSF13-202ENST00000349228 DDX58O95786 925 aaKnown RBP18.76■□□□□ 0.59
TNFSF13-202ENST00000349228 TRHP20396 242 aaPredicted RBP18.76■□□□□ 0.59
TNFSF13-202ENST00000349228 RRAGDQ9NQL2 400 aaPredicted RBP18.76■□□□□ 0.59
TNFSF13-202ENST00000349228 CAMTA1Q9Y6Y1 1673 aa18.75■□□□□ 0.59
TNFSF13-202ENST00000349228 BRD1O95696 1058 aa18.75■□□□□ 0.59
TNFSF13-202ENST00000349228 CLASRPQ8N2M8 674 aaKnown RBP18.75■□□□□ 0.59
TNFSF13-202ENST00000349228 RUFY2Q8WXA3 655 aa18.75■□□□□ 0.59
TNFSF13-202ENST00000349228 GPATCH3Q96I76 525 aa18.75■□□□□ 0.59
TNFSF13-202ENST00000349228 PALD1Q9ULE6 856 aa18.75■□□□□ 0.59
TNFSF13-202ENST00000349228 PLEKHG2Q9H7P9 1386 aa18.75■□□□□ 0.59
TNFSF13-202ENST00000349228 SETD1BQ9UPS6 1966 aaKnown RBP18.75■□□□□ 0.59
TNFSF13-202ENST00000349228 CLCN1P35523 988 aa18.74■□□□□ 0.59
TNFSF13-202ENST00000349228 C9orf78Q9NZ63 289 aaPredicted RBP18.74■□□□□ 0.59
TNFSF13-202ENST00000349228 RAD50Q92878 1312 aa18.74■□□□□ 0.59
TNFSF13-202ENST00000349228 MBD3O95983 291 aa18.74■□□□□ 0.59
TNFSF13-202ENST00000349228 CCDC173Q0VFZ6 552 aa18.74■□□□□ 0.59
TNFSF13-202ENST00000349228 PKP1Q13835 747 aa18.74■□□□□ 0.59
TNFSF13-202ENST00000349228 KIAA1211Q6ZU35 1233 aa18.74■□□□□ 0.59
TNFSF13-202ENST00000349228 ORAI2Q96SN7 254 aa18.74■□□□□ 0.59
TNFSF13-202ENST00000349228 OS9Q13438 667 aaPredicted RBP18.73■□□□□ 0.59
TNFSF13-202ENST00000349228 AEBP2Q6ZN18 517 aaPredicted RBP18.73■□□□□ 0.59
TNFSF13-202ENST00000349228 KRT28Q7Z3Y7 464 aa18.73■□□□□ 0.59
TNFSF13-202ENST00000349228 LINS1Q8NG48 757 aa18.73■□□□□ 0.59
TNFSF13-202ENST00000349228 TRIM44Q96DX7 344 aaPredicted RBP18.73■□□□□ 0.59
TNFSF13-202ENST00000349228 MAP3K2Q9Y2U5 619 aa18.73■□□□□ 0.59
TNFSF13-202ENST00000349228 UTYO14607 1347 aa18.73■□□□□ 0.59
TNFSF13-202ENST00000349228 RBM33Q96EV2 1170 aaKnown RBP18.73■□□□□ 0.59
TNFSF13-202ENST00000349228 DDX21Q9NR30 783 aaKnown RBP eCLIP18.73■□□□□ 0.59
TNFSF13-202ENST00000349228 PRPF40AO75400 957 aaKnown RBP18.72■□□□□ 0.59
TNFSF13-202ENST00000349228 NASPP49321 788 aaPredicted RBP18.72■□□□□ 0.59
TNFSF13-202ENST00000349228 PPP1R9BQ96SB3 815 aa18.72■□□□□ 0.59
TNFSF13-202ENST00000349228 ADAMTSL3P82987 1691 aa18.72■□□□□ 0.59
TNFSF13-202ENST00000349228 KIF1AQ12756 1690 aa18.72■□□□□ 0.59
TNFSF13-202ENST00000349228 NCLP19338 710 aaKnown RBP18.71■□□□□ 0.59
TNFSF13-202ENST00000349228 ZSCAN23Q3MJ62 389 aa18.71■□□□□ 0.59
TNFSF13-202ENST00000349228 ECHDC1Q9NTX5 307 aa18.71■□□□□ 0.59
TNFSF13-202ENST00000349228 ADAMTS7Q9UKP4 1686 aa18.7■□□□□ 0.58
TNFSF13-202ENST00000349228 PXDNQ92626 1479 aa18.7■□□□□ 0.58
TNFSF13-202ENST00000349228 CAVIN1Q6NZI2 390 aaKnown RBP18.7■□□□□ 0.58
TNFSF13-202ENST00000349228 LSG1Q9H089 658 aaKnown RBP18.7■□□□□ 0.58
TNFSF13-202ENST00000349228 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.7■□□□□ 0.58
TNFSF13-202ENST00000349228 C19orf44Q9H6X5 657 aa18.69■□□□□ 0.58
TNFSF13-202ENST00000349228 RGPD2P0DJD1 1756 aa18.69■□□□□ 0.58
TNFSF13-202ENST00000349228 WDR33Q9C0J8 1336 aaKnown RBP18.69■□□□□ 0.58
TNFSF13-202ENST00000349228 TRPM3Q9HCF6 1732 aaPredicted RBP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms