RNA–Protein interactions for RNA: ENST00000348333.7

TNFRSF25-201, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF25, Length 1,119 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-201ENST00000348333 COL15A1P39059 1388 aa30.38■■■□□ 2.45
TNFRSF25-201ENST00000348333 MCM10Q7L590 875 aa30.37■■■□□ 2.45
TNFRSF25-201ENST00000348333 HEG1Q9ULI3 1381 aa30.37■■■□□ 2.45
TNFRSF25-201ENST00000348333 USPL1Q5W0Q7 1092 aa30.36■■■□□ 2.45
TNFRSF25-201ENST00000348333 PARP3Q9Y6F1 533 aa30.36■■■□□ 2.45
TNFRSF25-201ENST00000348333 DCTN1Q14203 1278 aa30.35■■■□□ 2.45
TNFRSF25-201ENST00000348333 CANXP27824 592 aaKnown RBP30.34■■■□□ 2.45
TNFRSF25-201ENST00000348333 SCN7AQ01118 1682 aa30.33■■■□□ 2.45
TNFRSF25-201ENST00000348333 A0A0G2JLW4 131 aa30.33■■■□□ 2.45
TNFRSF25-201ENST00000348333 NRXN2Q9P2S2 1712 aa30.33■■■□□ 2.45
TNFRSF25-201ENST00000348333 BTBD11A6QL63 1104 aa30.31■■■□□ 2.44
TNFRSF25-201ENST00000348333 DDX10Q13206 875 aaKnown RBP30.31■■■□□ 2.44
TNFRSF25-201ENST00000348333 BCL2L12Q9HB09 334 aa30.31■■■□□ 2.44
TNFRSF25-201ENST00000348333 ZPR1O75312 459 aa30.3■■■□□ 2.44
TNFRSF25-201ENST00000348333 TM4SF1P30408 202 aa30.3■■■□□ 2.44
TNFRSF25-201ENST00000348333 POLRMTO00411 1230 aaKnown RBP30.29■■■□□ 2.44
TNFRSF25-201ENST00000348333 DPEP1P16444 411 aa30.29■■■□□ 2.44
TNFRSF25-201ENST00000348333 NARFQ9UHQ1 456 aa30.29■■■□□ 2.44
TNFRSF25-201ENST00000348333 ARFGEF1Q9Y6D6 1849 aa30.29■■■□□ 2.44
TNFRSF25-201ENST00000348333 TGFB2P61812 414 aa30.28■■■□□ 2.44
TNFRSF25-201ENST00000348333 FMNL2Q96PY5 1086 aa30.28■■■□□ 2.44
TNFRSF25-201ENST00000348333 KDM3BQ7LBC6 1761 aa30.28■■■□□ 2.44
TNFRSF25-201ENST00000348333 PRAMEF22A3QJZ6 481 aa30.27■■■□□ 2.44
TNFRSF25-201ENST00000348333 STARD3NLO95772 234 aa30.27■■■□□ 2.44
TNFRSF25-201ENST00000348333 EIF5P55010 431 aaKnown RBP30.27■■■□□ 2.44
TNFRSF25-201ENST00000348333 RTF1Q92541 710 aaKnown RBP30.27■■■□□ 2.44
TNFRSF25-201ENST00000348333 PLEKHF1Q96S99 279 aa30.27■■■□□ 2.44
TNFRSF25-201ENST00000348333 BCORQ6W2J9 1755 aa30.27■■■□□ 2.44
TNFRSF25-201ENST00000348333 NFIXQ14938 502 aa30.26■■■□□ 2.43
TNFRSF25-201ENST00000348333 A1BGP04217 495 aa30.25■■■□□ 2.43
TNFRSF25-201ENST00000348333 KCNA3P22001 575 aa30.25■■■□□ 2.43
TNFRSF25-201ENST00000348333 LAMB4A4D0S4 1761 aa30.23■■■□□ 2.43
TNFRSF25-201ENST00000348333 DLEC1Q9Y238 1755 aa30.23■■■□□ 2.43
TNFRSF25-201ENST00000348333 ATP10DQ9P241 1426 aa30.23■■■□□ 2.43
TNFRSF25-201ENST00000348333 BCS1LQ9Y276 419 aa30.23■■■□□ 2.43
TNFRSF25-201ENST00000348333 ZNF330Q9Y3S2 320 aaPredicted RBP30.23■■■□□ 2.43
TNFRSF25-201ENST00000348333 ADCY9O60503 1353 aa30.23■■■□□ 2.43
TNFRSF25-201ENST00000348333 PIP4K2AP48426 406 aaPredicted RBP30.22■■■□□ 2.43
TNFRSF25-201ENST00000348333 USP16Q9Y5T5 823 aa30.22■■■□□ 2.43
TNFRSF25-201ENST00000348333 ANKRD31Q8N7Z5 1873 aa30.22■■■□□ 2.43
TNFRSF25-201ENST00000348333 HTATSF1O43719 755 aaKnown RBP30.21■■■□□ 2.43
TNFRSF25-201ENST00000348333 TEX13AQ9BXU3 409 aaPredicted RBP30.21■■■□□ 2.43
TNFRSF25-201ENST00000348333 CHRNA5P30532 468 aa30.2■■■□□ 2.43
TNFRSF25-201ENST00000348333 MIS18AQ9NYP9 233 aa30.2■■■□□ 2.43
TNFRSF25-201ENST00000348333 RALBP1Q15311 655 aa30.19■■■□□ 2.42
TNFRSF25-201ENST00000348333 THUMPD2Q9BTF0 503 aaKnown RBP30.19■■■□□ 2.42
TNFRSF25-201ENST00000348333 TBC1D2BQ9UPU7 963 aa30.19■■■□□ 2.42
TNFRSF25-201ENST00000348333 CARMIL3Q8ND23 1372 aa30.18■■■□□ 2.42
TNFRSF25-201ENST00000348333 BICDL1Q6ZP65 573 aa30.18■■■□□ 2.42
TNFRSF25-201ENST00000348333 IL6STP40189 918 aaPredicted RBP30.17■■■□□ 2.42
TNFRSF25-201ENST00000348333 NFE2L2Q16236 605 aa30.16■■■□□ 2.42
TNFRSF25-201ENST00000348333 A0A087WZG4 1122 aa30.15■■■□□ 2.42
TNFRSF25-201ENST00000348333 SERPINB2P05120 415 aa30.15■■■□□ 2.42
TNFRSF25-201ENST00000348333 TAF7Q15545 349 aaPredicted RBP30.15■■■□□ 2.42
TNFRSF25-201ENST00000348333 TBC1D9BQ66K14 1250 aa30.15■■■□□ 2.42
TNFRSF25-201ENST00000348333 COL11A2P13942 1736 aaPredicted RBP30.15■■■□□ 2.42
TNFRSF25-201ENST00000348333 NEFMP07197 916 aa30.14■■■□□ 2.42
TNFRSF25-201ENST00000348333 SNRPA1P09661 255 aaKnown RBP30.13■■■□□ 2.41
TNFRSF25-201ENST00000348333 MYBBP1AQ9BQG0 1328 aaKnown RBP30.13■■■□□ 2.41
TNFRSF25-201ENST00000348333 CAMTA2O94983 1202 aa30.12■■■□□ 2.41
TNFRSF25-201ENST00000348333 PIM2Q9P1W9 311 aa30.12■■■□□ 2.41
TNFRSF25-201ENST00000348333 MAPK8IP3Q9UPT6 1336 aa30.12■■■□□ 2.41
TNFRSF25-201ENST00000348333 ZNF526Q8TF50 670 aaPredicted RBP30.11■■■□□ 2.41
TNFRSF25-201ENST00000348333 SBF1O95248 1867 aa30.1■■■□□ 2.41
TNFRSF25-201ENST00000348333 NBPF26B4DH59 902 aa30.1■■■□□ 2.41
TNFRSF25-201ENST00000348333 NBPF10Q6P3W6 841 aaKnown RBP30.1■■■□□ 2.41
TNFRSF25-201ENST00000348333 ARHGAP27Q6ZUM4 889 aa30.1■■■□□ 2.41
TNFRSF25-201ENST00000348333 NBPF15Q8N660 670 aa30.1■■■□□ 2.41
TNFRSF25-201ENST00000348333 GIGYF1O75420 1035 aaPredicted RBP30.09■■■□□ 2.41
TNFRSF25-201ENST00000348333 CACNA1SQ13698 1873 aa30.09■■■□□ 2.41
TNFRSF25-201ENST00000348333 C1QTNF8P60827 252 aa30.08■■■□□ 2.41
TNFRSF25-201ENST00000348333 DZIP3Q86Y13 1208 aaKnown RBP30.08■■■□□ 2.41
TNFRSF25-201ENST00000348333 CCDC24Q8N4L8 307 aa30.08■■■□□ 2.41
TNFRSF25-201ENST00000348333 DALRD3Q5D0E6 543 aaKnown RBP30.07■■■□□ 2.4
TNFRSF25-201ENST00000348333 CCDC146Q8IYE0 955 aa30.04■■■□□ 2.4
TNFRSF25-201ENST00000348333 PNNQ9H307 717 aaKnown RBP30.04■■■□□ 2.4
TNFRSF25-201ENST00000348333 PRR5LQ6MZQ0 368 aa30.03■■■□□ 2.4
TNFRSF25-201ENST00000348333 GPBP1L1Q9HC44 474 aaPredicted RBP30.03■■■□□ 2.4
TNFRSF25-201ENST00000348333 CCDC88AQ3V6T2 1871 aa30.03■■■□□ 2.4
TNFRSF25-201ENST00000348333 EIF4A1P60842 406 aaKnown RBP30.02■■■□□ 2.4
TNFRSF25-201ENST00000348333 NPM2Q86SE8 214 aaKnown RBP30.02■■■□□ 2.4
TNFRSF25-201ENST00000348333 C2CD5Q86YS7 1000 aa30.02■■■□□ 2.4
TNFRSF25-201ENST00000348333 RRP7AQ9Y3A4 280 aaKnown RBP30.02■■■□□ 2.4
TNFRSF25-201ENST00000348333 NUP98P52948 1817 aa30.01■■■□□ 2.4
TNFRSF25-201ENST00000348333 RIPK4P57078 832 aa30.01■■■□□ 2.39
TNFRSF25-201ENST00000348333 PNISRQ8TF01 805 aaKnown RBP30.01■■■□□ 2.39
TNFRSF25-201ENST00000348333 TMPOP42166 694 aaKnown RBP30■■■□□ 2.39
TNFRSF25-201ENST00000348333 PRKRIP1Q9H875 184 aaPredicted RBP29.99■■■□□ 2.39
TNFRSF25-201ENST00000348333 SETDB2Q96T68 719 aa29.98■■■□□ 2.39
TNFRSF25-201ENST00000348333 C9orf131Q5VYM1 1079 aa29.97■■■□□ 2.39
TNFRSF25-201ENST00000348333 ARFGEF2Q9Y6D5 1785 aa29.97■■■□□ 2.39
TNFRSF25-201ENST00000348333 SLX4Q8IY92 1834 aa29.95■■■□□ 2.39
TNFRSF25-201ENST00000348333 H0YIN7 160 aa29.95■■■□□ 2.39
TNFRSF25-201ENST00000348333 RASSF7Q02833 373 aa29.95■■■□□ 2.39
TNFRSF25-201ENST00000348333 NGEFQ8N5V2 710 aa29.95■■■□□ 2.39
TNFRSF25-201ENST00000348333 CNBD1Q8NA66 436 aa29.95■■■□□ 2.39
TNFRSF25-201ENST00000348333 BRIP1Q9BX63 1249 aa29.95■■■□□ 2.39
TNFRSF25-201ENST00000348333 NEUROD2Q15784 382 aa29.94■■■□□ 2.38
TNFRSF25-201ENST00000348333 HLFQ16534 295 aa29.94■■■□□ 2.38
TNFRSF25-201ENST00000348333 TSPYL4Q9UJ04 414 aa29.94■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms