RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 C1orf115Q9H7X2 142 aa27.01■■□□□ 1.92
TSPAN3-202ENST00000346495 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.01■■□□□ 1.91
TSPAN3-202ENST00000346495 BCL9LQ86UU0 1499 aa27.01■■□□□ 1.91
TSPAN3-202ENST00000346495 ANXA1P04083 346 aa27.01■■□□□ 1.91
TSPAN3-202ENST00000346495 HSPA1LP34931 641 aa27.01■■□□□ 1.91
TSPAN3-202ENST00000346495 VPS72Q15906 364 aa27.01■■□□□ 1.91
TSPAN3-202ENST00000346495 DDB1Q16531 1140 aa27.01■■□□□ 1.91
TSPAN3-202ENST00000346495 PDIA6Q15084 440 aa26.99■■□□□ 1.91
TSPAN3-202ENST00000346495 PROSER3Q2NL68 480 aa26.99■■□□□ 1.91
TSPAN3-202ENST00000346495 MEIS3Q99687 375 aa26.99■■□□□ 1.91
TSPAN3-202ENST00000346495 USP16Q9Y5T5 823 aa26.98■■□□□ 1.91
TSPAN3-202ENST00000346495 SKAP1Q86WV1 359 aa26.98■■□□□ 1.91
TSPAN3-202ENST00000346495 SMC5Q8IY18 1101 aa26.98■■□□□ 1.91
TSPAN3-202ENST00000346495 DNAAF4Q8WXU2 420 aa26.98■■□□□ 1.91
TSPAN3-202ENST00000346495 PI4KAP2A4QPH2 592 aa26.97■■□□□ 1.91
TSPAN3-202ENST00000346495 DDX58O95786 925 aaKnown RBP26.97■■□□□ 1.91
TSPAN3-202ENST00000346495 PI4KAP1Q8N8J0 262 aa26.97■■□□□ 1.91
TSPAN3-202ENST00000346495 ADCY9O60503 1353 aa26.96■■□□□ 1.91
TSPAN3-202ENST00000346495 GNAI3P08754 354 aa26.96■■□□□ 1.91
TSPAN3-202ENST00000346495 PIGBQ92521 554 aa26.96■■□□□ 1.91
TSPAN3-202ENST00000346495 ATP10DQ9P241 1426 aa26.96■■□□□ 1.91
TSPAN3-202ENST00000346495 DOT1LQ8TEK3 1739 aa26.96■■□□□ 1.91
TSPAN3-202ENST00000346495 ERBB4Q15303 1308 aa26.95■■□□□ 1.91
TSPAN3-202ENST00000346495 KSR2Q6VAB6 950 aa26.95■■□□□ 1.91
TSPAN3-202ENST00000346495 RPAP2Q8IXW5 612 aaPredicted RBP26.95■■□□□ 1.91
TSPAN3-202ENST00000346495 SRCIN1Q9C0H9 1055 aa26.95■■□□□ 1.91
TSPAN3-202ENST00000346495 PDZRN3Q9UPQ7 1066 aa26.95■■□□□ 1.91
TSPAN3-202ENST00000346495 BCL9O00512 1426 aa26.94■■□□□ 1.9
TSPAN3-202ENST00000346495 SIRT2Q8IXJ6 389 aa26.94■■□□□ 1.9
TSPAN3-202ENST00000346495 ANKRD44Q8N8A2 993 aa26.94■■□□□ 1.9
TSPAN3-202ENST00000346495 USP21Q9UK80 565 aa26.94■■□□□ 1.9
TSPAN3-202ENST00000346495 MEX3CQ5U5Q3 659 aaKnown RBP26.93■■□□□ 1.9
TSPAN3-202ENST00000346495 GCC1Q96CN9 775 aa26.93■■□□□ 1.9
TSPAN3-202ENST00000346495 PTCD1O75127 700 aaKnown RBP26.92■■□□□ 1.9
TSPAN3-202ENST00000346495 MYL6BP14649 208 aa26.92■■□□□ 1.9
TSPAN3-202ENST00000346495 RGS3P49796 1198 aa26.92■■□□□ 1.9
TSPAN3-202ENST00000346495 BEND3Q5T5X7 828 aa26.92■■□□□ 1.9
TSPAN3-202ENST00000346495 GNAI2P04899 355 aa26.91■■□□□ 1.9
TSPAN3-202ENST00000346495 CEP85Q6P2H3 762 aa26.91■■□□□ 1.9
TSPAN3-202ENST00000346495 MAP3K2Q9Y2U5 619 aa26.91■■□□□ 1.9
TSPAN3-202ENST00000346495 ATG3Q9NT62 314 aa26.9■■□□□ 1.9
TSPAN3-202ENST00000346495 VSIG10Q8N0Z9 540 aa26.9■■□□□ 1.9
TSPAN3-202ENST00000346495 ASAP1Q9ULH1 1129 aa26.9■■□□□ 1.9
TSPAN3-202ENST00000346495 AIMP1Q12904 312 aaKnown RBP26.89■■□□□ 1.9
TSPAN3-202ENST00000346495 FAM98CQ17RN3 349 aaKnown RBP26.89■■□□□ 1.9
TSPAN3-202ENST00000346495 LRP10Q7Z4F1 713 aa26.89■■□□□ 1.9
TSPAN3-202ENST00000346495 MARCH10Q8NA82 808 aaPredicted RBP26.89■■□□□ 1.9
TSPAN3-202ENST00000346495 TEX13AQ9BXU3 409 aaPredicted RBP26.89■■□□□ 1.9
TSPAN3-202ENST00000346495 ALDH1L1O75891 902 aa26.88■■□□□ 1.89
TSPAN3-202ENST00000346495 XAGE3Q8WTP9 111 aa26.88■■□□□ 1.89
TSPAN3-202ENST00000346495 USP44Q9H0E7 712 aa26.88■■□□□ 1.89
TSPAN3-202ENST00000346495 COPS6Q7L5N1 327 aa26.87■■□□□ 1.89
TSPAN3-202ENST00000346495 KAT6BQ8WYB5 2073 aa26.87■■□□□ 1.89
TSPAN3-202ENST00000346495 PRIM1P49642 420 aaKnown RBP26.87■■□□□ 1.89
TSPAN3-202ENST00000346495 RIC3Q7Z5B4 369 aa26.87■■□□□ 1.89
TSPAN3-202ENST00000346495 SYTL4Q96C24 671 aaPredicted RBP26.87■■□□□ 1.89
TSPAN3-202ENST00000346495 HMMRO75330 724 aa26.86■■□□□ 1.89
TSPAN3-202ENST00000346495 UBTFL1P0CB47 393 aaPredicted RBP26.86■■□□□ 1.89
TSPAN3-202ENST00000346495 NUCB1Q02818 461 aa26.86■■□□□ 1.89
TSPAN3-202ENST00000346495 LINS1Q8NG48 757 aa26.84■■□□□ 1.89
TSPAN3-202ENST00000346495 DCTPP1Q9H773 170 aa26.84■■□□□ 1.89
TSPAN3-202ENST00000346495 RBM19Q9Y4C8 960 aaKnown RBP26.83■■□□□ 1.89
TSPAN3-202ENST00000346495 IBTKQ9P2D0 1353 aaPredicted RBP26.83■■□□□ 1.89
TSPAN3-202ENST00000346495 THSD7AQ9UPZ6 1657 aa26.83■■□□□ 1.89
TSPAN3-202ENST00000346495 NBPF26B4DH59 902 aa26.83■■□□□ 1.88
TSPAN3-202ENST00000346495 PIP4K2AP48426 406 aaPredicted RBP26.83■■□□□ 1.88
TSPAN3-202ENST00000346495 NBPF14Q5TI25 921 aa26.83■■□□□ 1.88
TSPAN3-202ENST00000346495 NBPF10Q6P3W6 841 aaKnown RBP26.83■■□□□ 1.88
TSPAN3-202ENST00000346495 ANKRD13DQ6ZTN6 518 aa26.83■■□□□ 1.88
TSPAN3-202ENST00000346495 NBPF15Q8N660 670 aa26.83■■□□□ 1.88
TSPAN3-202ENST00000346495 RBM42Q9BTD8 480 aaKnown RBP26.83■■□□□ 1.88
TSPAN3-202ENST00000346495 NEXNQ0ZGT2 675 aa26.82■■□□□ 1.88
TSPAN3-202ENST00000346495 AFF2P51816 1311 aa26.82■■□□□ 1.88
TSPAN3-202ENST00000346495 ARFGEF2Q9Y6D5 1785 aa26.82■■□□□ 1.88
TSPAN3-202ENST00000346495 PDE4AP27815 886 aa26.81■■□□□ 1.88
TSPAN3-202ENST00000346495 CHD1LQ86WJ1 897 aa26.81■■□□□ 1.88
TSPAN3-202ENST00000346495 METTL22Q9BUU2 404 aaPredicted RBP26.81■■□□□ 1.88
TSPAN3-202ENST00000346495 LRRFIP2Q9Y608 721 aaKnown RBP26.81■■□□□ 1.88
TSPAN3-202ENST00000346495 A1BGP04217 495 aa26.8■■□□□ 1.88
TSPAN3-202ENST00000346495 HDAC5Q9UQL6 1122 aa26.8■■□□□ 1.88
TSPAN3-202ENST00000346495 STARD3NLO95772 234 aa26.79■■□□□ 1.88
TSPAN3-202ENST00000346495 ATP8B2P98198 1209 aa26.79■■□□□ 1.88
TSPAN3-202ENST00000346495 ANKRD45Q5TZF3 282 aa26.79■■□□□ 1.88
TSPAN3-202ENST00000346495 DNAJC10Q8IXB1 793 aa26.79■■□□□ 1.88
TSPAN3-202ENST00000346495 PLBD2Q8NHP8 589 aa26.79■■□□□ 1.88
TSPAN3-202ENST00000346495 ACSBG1Q96GR2 724 aa26.79■■□□□ 1.88
TSPAN3-202ENST00000346495 GJD4Q96KN9 370 aaPredicted RBP26.78■■□□□ 1.88
TSPAN3-202ENST00000346495 BACH2Q9BYV9 841 aa26.78■■□□□ 1.88
TSPAN3-202ENST00000346495 C9orf78Q9NZ63 289 aaPredicted RBP26.78■■□□□ 1.88
TSPAN3-202ENST00000346495 A0A0G2JS52 829 aa26.77■■□□□ 1.88
TSPAN3-202ENST00000346495 MYT1Q01538 1121 aa26.77■■□□□ 1.88
TSPAN3-202ENST00000346495 CWF19L2Q2TBE0 894 aaKnown RBP26.77■■□□□ 1.88
TSPAN3-202ENST00000346495 ATRNO75882 1429 aa26.77■■□□□ 1.88
TSPAN3-202ENST00000346495 NBPF7P0C2Y1 421 aaPredicted RBP26.76■■□□□ 1.87
TSPAN3-202ENST00000346495 FAM161AQ3B820 660 aa26.76■■□□□ 1.87
TSPAN3-202ENST00000346495 LNPKQ9C0E8 428 aa26.76■■□□□ 1.87
TSPAN3-202ENST00000346495 TRPC5Q9UL62 973 aaPredicted RBP26.76■■□□□ 1.87
TSPAN3-202ENST00000346495 TJP1Q07157 1748 aa26.76■■□□□ 1.87
TSPAN3-202ENST00000346495 NUP188Q5SRE5 1749 aa26.76■■□□□ 1.87
TSPAN3-202ENST00000346495 MYD88Q99836 296 aa26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 187 ms