RNA–Protein interactions for RNA: ENST00000342711.5

CDC42BPG-201, Transcript of CDC42 binding protein kinase gamma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPG, Length 5,742 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPG-201ENST00000342711 CTAGE5O15320 804 aa19.18■□□□□ 0.66
CDC42BPG-201ENST00000342711 CCDC82Q8N4S0 544 aa19.18■□□□□ 0.66
CDC42BPG-201ENST00000342711 MCM3P25205 808 aa19.17■□□□□ 0.66
CDC42BPG-201ENST00000342711 PHF23Q9BUL5 403 aaPredicted RBP19.17■□□□□ 0.66
CDC42BPG-201ENST00000342711 POTEJP0CG39 1038 aa19.17■□□□□ 0.66
CDC42BPG-201ENST00000342711 GOPCQ9HD26 462 aa19.17■□□□□ 0.66
CDC42BPG-201ENST00000342711 F6X3S4 739 aa19.17■□□□□ 0.66
CDC42BPG-201ENST00000342711 NUTM2BA6NNL0 878 aaPredicted RBP19.16■□□□□ 0.66
CDC42BPG-201ENST00000342711 NUTM2EB1AL46 878 aaPredicted RBP19.16■□□□□ 0.66
CDC42BPG-201ENST00000342711 NUTM2AQ8IVF1 878 aaPredicted RBP19.16■□□□□ 0.66
CDC42BPG-201ENST00000342711 CNNM3Q8NE01 707 aa19.16■□□□□ 0.66
CDC42BPG-201ENST00000342711 NAPBQ9H115 298 aa19.16■□□□□ 0.66
CDC42BPG-201ENST00000342711 GOLGA6L10A0A0M3HER8 536 aa19.16■□□□□ 0.66
CDC42BPG-201ENST00000342711 DAPK1P53355 1430 aa19.16■□□□□ 0.66
CDC42BPG-201ENST00000342711 HMGB1P09429 215 aaKnown RBP19.16■□□□□ 0.66
CDC42BPG-201ENST00000342711 IFFO1Q0D2I5 559 aa19.16■□□□□ 0.66
CDC42BPG-201ENST00000342711 CCDC91Q7Z6B0 441 aa19.16■□□□□ 0.66
CDC42BPG-201ENST00000342711 FSIP1Q8NA03 581 aa19.16■□□□□ 0.66
CDC42BPG-201ENST00000342711 RPGRIP1LQ68CZ1 1315 aa19.16■□□□□ 0.66
CDC42BPG-201ENST00000342711 CETN2P41208 172 aa19.16■□□□□ 0.66
CDC42BPG-201ENST00000342711 PRDM11Q9NQV5 511 aa19.16■□□□□ 0.66
CDC42BPG-201ENST00000342711 ADCY5O95622 1261 aa19.15■□□□□ 0.66
CDC42BPG-201ENST00000342711 NUDT16Q96DE0 195 aaKnown RBP19.15■□□□□ 0.66
CDC42BPG-201ENST00000342711 BCCIPQ9P287 314 aaKnown RBP eCLIP19.15■□□□□ 0.66
CDC42BPG-201ENST00000342711 CCDC196A0A1B0GTZ2 297 aa19.15■□□□□ 0.66
CDC42BPG-201ENST00000342711 CCT2P78371 535 aaKnown RBP19.15■□□□□ 0.66
CDC42BPG-201ENST00000342711 LARP1Q6PKG0 1096 aaKnown RBP19.15■□□□□ 0.66
CDC42BPG-201ENST00000342711 UBA5Q9GZZ9 404 aa19.15■□□□□ 0.66
CDC42BPG-201ENST00000342711 TMC6Q7Z403 805 aa19.15■□□□□ 0.66
CDC42BPG-201ENST00000342711 SLC12A7Q9Y666 1083 aa19.15■□□□□ 0.66
CDC42BPG-201ENST00000342711 GJB2P29033 226 aa19.15■□□□□ 0.66
CDC42BPG-201ENST00000342711 PHAXQ9H814 394 aaKnown RBP19.15■□□□□ 0.66
CDC42BPG-201ENST00000342711 POLR3DP05423 398 aaPredicted RBP19.14■□□□□ 0.66
CDC42BPG-201ENST00000342711 MKNK2Q9HBH9 465 aa19.14■□□□□ 0.66
CDC42BPG-201ENST00000342711 SSRP1Q08945 709 aaKnown RBP19.14■□□□□ 0.65
CDC42BPG-201ENST00000342711 TAF7Q15545 349 aaPredicted RBP19.14■□□□□ 0.65
CDC42BPG-201ENST00000342711 DDX19AQ9NUU7 478 aaKnown RBP19.14■□□□□ 0.65
CDC42BPG-201ENST00000342711 BIN1O00499 593 aa19.14■□□□□ 0.65
CDC42BPG-201ENST00000342711 YEATS4O95619 227 aa19.14■□□□□ 0.65
CDC42BPG-201ENST00000342711 TRERF1Q96PN7 1200 aa19.14■□□□□ 0.65
CDC42BPG-201ENST00000342711 TFIP11Q9UBB9 837 aaKnown RBP19.14■□□□□ 0.65
CDC42BPG-201ENST00000342711 ZC3H6P61129 1189 aaKnown RBP19.14■□□□□ 0.65
CDC42BPG-201ENST00000342711 RBM27Q9P2N5 1060 aaKnown RBP19.14■□□□□ 0.65
CDC42BPG-201ENST00000342711 ZNF213O14771 459 aa19.13■□□□□ 0.65
CDC42BPG-201ENST00000342711 USO1O60763 962 aaKnown RBP19.13■□□□□ 0.65
CDC42BPG-201ENST00000342711 NEMFO60524 1076 aa19.13■□□□□ 0.65
CDC42BPG-201ENST00000342711 STARD3NLO95772 234 aa19.13■□□□□ 0.65
CDC42BPG-201ENST00000342711 RNF187Q5TA31 235 aaPredicted RBP19.13■□□□□ 0.65
CDC42BPG-201ENST00000342711 VPS36Q86VN1 386 aa19.13■□□□□ 0.65
CDC42BPG-201ENST00000342711 PAFAH1B1P43034 410 aa19.13■□□□□ 0.65
CDC42BPG-201ENST00000342711 ZNF287Q9HBT7 754 aa19.13■□□□□ 0.65
CDC42BPG-201ENST00000342711 CTCFLQ8NI51 663 aaPredicted RBP19.13■□□□□ 0.65
CDC42BPG-201ENST00000342711 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.13■□□□□ 0.65
CDC42BPG-201ENST00000342711 GOLGA8BA8MQT2 603 aa19.12■□□□□ 0.65
CDC42BPG-201ENST00000342711 PPP4R3BQ5MIZ7 849 aa19.12■□□□□ 0.65
CDC42BPG-201ENST00000342711 STX1AQ16623 288 aa19.12■□□□□ 0.65
CDC42BPG-201ENST00000342711 TDRD12Q587J7 1177 aaKnown RBP19.12■□□□□ 0.65
CDC42BPG-201ENST00000342711 RANBP6O60518 1105 aaKnown RBP19.12■□□□□ 0.65
CDC42BPG-201ENST00000342711 IQGAP2Q13576 1575 aa19.12■□□□□ 0.65
CDC42BPG-201ENST00000342711 GSDMDP57764 484 aa19.12■□□□□ 0.65
CDC42BPG-201ENST00000342711 GSTTP1A0A1W2PQM5 241 aa19.12■□□□□ 0.65
CDC42BPG-201ENST00000342711 GOLGA8AA7E2F4 631 aa19.12■□□□□ 0.65
CDC42BPG-201ENST00000342711 CAVIN4Q5BKX8 364 aa19.12■□□□□ 0.65
CDC42BPG-201ENST00000342711 TBC1D9Q6ZT07 1266 aa19.12■□□□□ 0.65
CDC42BPG-201ENST00000342711 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.11■□□□□ 0.653e-10■■■■■ 79.1
CDC42BPG-201ENST00000342711 STX6O43752 255 aa19.11■□□□□ 0.65
CDC42BPG-201ENST00000342711 SUPT6HQ7KZ85 1726 aaKnown RBP19.11■□□□□ 0.65
CDC42BPG-201ENST00000342711 LRPPRCP42704 1394 aaKnown RBP19.11■□□□□ 0.65
CDC42BPG-201ENST00000342711 PTCD1O75127 700 aaKnown RBP19.11■□□□□ 0.65
CDC42BPG-201ENST00000342711 GTF2F1P35269 517 aaKnown RBP eCLIP19.11■□□□□ 0.65
CDC42BPG-201ENST00000342711 FGFR1OPO95684 399 aaKnown RBP19.11■□□□□ 0.65
CDC42BPG-201ENST00000342711 CALCOCO1Q9P1Z2 691 aa19.11■□□□□ 0.65
CDC42BPG-201ENST00000342711 ABCC11Q96J66 1382 aa19.1■□□□□ 0.65
CDC42BPG-201ENST00000342711 CTNNBL1Q8WYA6 563 aaPredicted RBP19.1■□□□□ 0.65
CDC42BPG-201ENST00000342711 TNIP1Q15025 636 aa19.1■□□□□ 0.65
CDC42BPG-201ENST00000342711 TRIM27P14373 513 aa19.1■□□□□ 0.65
CDC42BPG-201ENST00000342711 USHBP1Q8N6Y0 703 aa19.1■□□□□ 0.65
CDC42BPG-201ENST00000342711 PODXL2Q9NZ53 605 aa19.1■□□□□ 0.65
CDC42BPG-201ENST00000342711 BAG4O95429 457 aaKnown RBP19.1■□□□□ 0.65
CDC42BPG-201ENST00000342711 PRKCSHP14314 528 aaPredicted RBP19.1■□□□□ 0.65
CDC42BPG-201ENST00000342711 MAP3K12Q12852 859 aa19.1■□□□□ 0.65
CDC42BPG-201ENST00000342711 NLRP5P59047 1200 aa19.09■□□□□ 0.65
CDC42BPG-201ENST00000342711 IFIT3O14879 490 aaKnown RBP19.09■□□□□ 0.65
CDC42BPG-201ENST00000342711 CCDC61Q9Y6R9 512 aa19.09■□□□□ 0.65
CDC42BPG-201ENST00000342711 SPDYE4A6NLX3 237 aa19.09■□□□□ 0.65
CDC42BPG-201ENST00000342711 SNW1Q13573 536 aaKnown RBP19.09■□□□□ 0.65
CDC42BPG-201ENST00000342711 DNAAF4Q8WXU2 420 aa19.09■□□□□ 0.65
CDC42BPG-201ENST00000342711 C11orf95C9JLR9 678 aaPredicted RBP19.09■□□□□ 0.65
CDC42BPG-201ENST00000342711 GCOM1H8Y6P7 765 aaPredicted RBP19.09■□□□□ 0.65
CDC42BPG-201ENST00000342711 MYZAPP0CAP1 466 aa19.09■□□□□ 0.65
CDC42BPG-201ENST00000342711 ANAPC15P60006 121 aa19.09■□□□□ 0.65
CDC42BPG-201ENST00000342711 TMEM266Q2M3C6 531 aa19.09■□□□□ 0.65
CDC42BPG-201ENST00000342711 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.09■□□□□ 0.65
CDC42BPG-201ENST00000342711 ISM2Q6H9L7 571 aa19.08■□□□□ 0.65
CDC42BPG-201ENST00000342711 IQCA1Q86XH1 822 aa19.08■□□□□ 0.65
CDC42BPG-201ENST00000342711 SMARCC1Q92922 1105 aaPredicted RBP19.08■□□□□ 0.65
CDC42BPG-201ENST00000342711 POTEB2H3BUK9 544 aa19.08■□□□□ 0.64
CDC42BPG-201ENST00000342711 MICALCLQ6ZW33 695 aa19.08■□□□□ 0.64
CDC42BPG-201ENST00000342711 MTIF2P46199 727 aaKnown RBP19.08■□□□□ 0.64
CDC42BPG-201ENST00000342711 CRACR2BQ8N4Y2 399 aaPredicted RBP19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms