RNA–Protein interactions for RNA: ENST00000341441.9

MEST-202, mesoderm specific transcript, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene MEST, Length 2,443 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEST-202ENST00000341441 THEMISQ8N1K5 641 aaPredicted RBP20.78■□□□□ 0.92
MEST-202ENST00000341441 MBD3O95983 291 aa20.78■□□□□ 0.92
MEST-202ENST00000341441 EIF2S2P20042 333 aaKnown RBP20.78■□□□□ 0.92
MEST-202ENST00000341441 HSPA4P34932 840 aa20.78■□□□□ 0.92
MEST-202ENST00000341441 RHPN1Q8TCX5 695 aa20.78■□□□□ 0.92
MEST-202ENST00000341441 CEMIPQ8WUJ3 1361 aa20.77■□□□□ 0.92
MEST-202ENST00000341441 EPB41L2O43491 1005 aaKnown RBP20.77■□□□□ 0.92
MEST-202ENST00000341441 MAP4K4O95819 1239 aaPredicted RBP20.77■□□□□ 0.92
MEST-202ENST00000341441 PI4K2BQ8TCG2 481 aa20.77■□□□□ 0.92
MEST-202ENST00000341441 PDLIM2Q96JY6 352 aa20.77■□□□□ 0.92
MEST-202ENST00000341441 C14orf37Q86TY3 774 aa20.77■□□□□ 0.92
MEST-202ENST00000341441 USP54Q70EL1 1684 aa20.77■□□□□ 0.92
MEST-202ENST00000341441 SRGAP3O43295 1099 aa20.76■□□□□ 0.91
MEST-202ENST00000341441 NBPF7P0C2Y1 421 aaPredicted RBP20.76■□□□□ 0.91
MEST-202ENST00000341441 EIF4A1P60842 406 aaKnown RBP20.76■□□□□ 0.91
MEST-202ENST00000341441 LGR6Q9HBX8 967 aa20.75■□□□□ 0.91
MEST-202ENST00000341441 HS1BP3Q53T59 392 aa20.75■□□□□ 0.91
MEST-202ENST00000341441 KIF1BPQ96EK5 621 aa20.75■□□□□ 0.91
MEST-202ENST00000341441 CHPF2Q9P2E5 772 aa20.75■□□□□ 0.91
MEST-202ENST00000341441 MSNP26038 577 aaKnown RBP20.74■□□□□ 0.91
MEST-202ENST00000341441 BEND3Q5T5X7 828 aa20.74■□□□□ 0.91
MEST-202ENST00000341441 SGSM2O43147 1006 aa20.74■□□□□ 0.91
MEST-202ENST00000341441 PI4KAP2A4QPH2 592 aa20.73■□□□□ 0.91
MEST-202ENST00000341441 NBPF6Q5VWK0 638 aa20.73■□□□□ 0.91
MEST-202ENST00000341441 PI4KAP1Q8N8J0 262 aa20.73■□□□□ 0.91
MEST-202ENST00000341441 DNAAF4Q8WXU2 420 aa20.73■□□□□ 0.91
MEST-202ENST00000341441 NBPF4Q96M43 638 aa20.73■□□□□ 0.91
MEST-202ENST00000341441 RAD50Q92878 1312 aa20.73■□□□□ 0.91
MEST-202ENST00000341441 IP6K1Q92551 441 aa20.73■□□□□ 0.91
MEST-202ENST00000341441 HOXB7P09629 217 aa20.72■□□□□ 0.91
MEST-202ENST00000341441 KCNQ3O43525 872 aa20.72■□□□□ 0.91
MEST-202ENST00000341441 MED1Q15648 1581 aaPredicted RBP20.71■□□□□ 0.91
MEST-202ENST00000341441 PLEKHG5O94827 1062 aa20.71■□□□□ 0.91
MEST-202ENST00000341441 FOXD4L6Q3SYB3 417 aaPredicted RBP20.71■□□□□ 0.91
MEST-202ENST00000341441 FOXD4L3Q6VB84 417 aaPredicted RBP20.71■□□□□ 0.91
MEST-202ENST00000341441 SNX14Q9Y5W7 946 aa20.71■□□□□ 0.91
MEST-202ENST00000341441 CNTROBQ8N137 903 aa20.7■□□□□ 0.91
MEST-202ENST00000341441 LSG1Q9H089 658 aaKnown RBP20.7■□□□□ 0.91
MEST-202ENST00000341441 PHF8Q9UPP1 1060 aa20.7■□□□□ 0.91
MEST-202ENST00000341441 WDR33Q9C0J8 1336 aaKnown RBP20.7■□□□□ 0.9
MEST-202ENST00000341441 LTN1O94822 1766 aa20.7■□□□□ 0.9
MEST-202ENST00000341441 ANXA1P04083 346 aa20.7■□□□□ 0.9
MEST-202ENST00000341441 NOL7Q9UMY1 257 aaKnown RBP20.7■□□□□ 0.9
MEST-202ENST00000341441 GDPD2Q9HCC8 539 aa20.69■□□□□ 0.9
MEST-202ENST00000341441 OFD1O75665 1012 aa20.69■□□□□ 0.9
MEST-202ENST00000341441 RASEFQ8IZ41 740 aa20.69■□□□□ 0.9
MEST-202ENST00000341441 GADD45BO75293 160 aaPredicted RBP20.68■□□□□ 0.9
MEST-202ENST00000341441 HSP90AB4PQ58FF6 505 aa20.68■□□□□ 0.9
MEST-202ENST00000341441 TTC14Q96N46 770 aa20.68■□□□□ 0.9
MEST-202ENST00000341441 RNF214Q8ND24 703 aa20.68■□□□□ 0.9
MEST-202ENST00000341441 CHMP4AQ9BY43 222 aa20.68■□□□□ 0.9
MEST-202ENST00000341441 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.68■□□□□ 0.9
MEST-202ENST00000341441 ADCY9O60503 1353 aa20.68■□□□□ 0.9
MEST-202ENST00000341441 KDM3BQ7LBC6 1761 aa20.67■□□□□ 0.9
MEST-202ENST00000341441 CWC27Q6UX04 472 aaKnown RBP20.67■□□□□ 0.9
MEST-202ENST00000341441 KIAA1211Q6ZU35 1233 aa20.67■□□□□ 0.9
MEST-202ENST00000341441 USP48Q86UV5 1035 aa20.67■□□□□ 0.9
MEST-202ENST00000341441 TEFQ10587 303 aa20.67■□□□□ 0.9
MEST-202ENST00000341441 UBE2Q2Q8WVN8 375 aa20.67■□□□□ 0.9
MEST-202ENST00000341441 SYAP1Q96A49 352 aaPredicted RBP20.67■□□□□ 0.9
MEST-202ENST00000341441 USP42Q9H9J4 1324 aaKnown RBP20.67■□□□□ 0.9
MEST-202ENST00000341441 RPAP1Q9BWH6 1393 aaPredicted RBP20.67■□□□□ 0.9
MEST-202ENST00000341441 NFAT5O94916 1531 aa20.66■□□□□ 0.9
MEST-202ENST00000341441 BTBD11A6QL63 1104 aa20.66■□□□□ 0.9
MEST-202ENST00000341441 SPG7Q9UQ90 795 aa20.66■□□□□ 0.9
MEST-202ENST00000341441 ZBTB7CA1YPR0 619 aa20.66■□□□□ 0.9
MEST-202ENST00000341441 AK2P54819 239 aa20.66■□□□□ 0.9
MEST-202ENST00000341441 OS9Q13438 667 aaPredicted RBP20.66■□□□□ 0.9
MEST-202ENST00000341441 ZNF530Q6P9A1 599 aaPredicted RBP20.66■□□□□ 0.9
MEST-202ENST00000341441 TSPY26PQ9H489 355 aa20.66■□□□□ 0.9
MEST-202ENST00000341441 SETD1BQ9UPS6 1966 aaKnown RBP20.66■□□□□ 0.9
MEST-202ENST00000341441 TPM2P07951 284 aa20.65■□□□□ 0.9
MEST-202ENST00000341441 MPRIPQ6WCQ1 1025 aa20.65■□□□□ 0.9
MEST-202ENST00000341441 TTC41PQ6P2S7 1318 aa20.65■□□□□ 0.9
MEST-202ENST00000341441 GLRX3O76003 335 aaKnown RBP20.65■□□□□ 0.9
MEST-202ENST00000341441 MTX1Q13505 466 aa20.65■□□□□ 0.9
MEST-202ENST00000341441 AKAP4Q5JQC9 854 aa20.65■□□□□ 0.9
MEST-202ENST00000341441 RUFY3Q7L099 469 aa20.65■□□□□ 0.9
MEST-202ENST00000341441 LRRC59Q96AG4 307 aaKnown RBP20.65■□□□□ 0.9
MEST-202ENST00000341441 LARP6Q9BRS8 491 aaKnown RBP20.65■□□□□ 0.9
MEST-202ENST00000341441 ZNF500O60304 480 aaPredicted RBP20.64■□□□□ 0.89
MEST-202ENST00000341441 LIMCH1Q9UPQ0 1083 aa20.64■□□□□ 0.89
MEST-202ENST00000341441 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.64■□□□□ 0.89
MEST-202ENST00000341441 FER1L4A9Z1Z3 1794 aa20.63■□□□□ 0.89
MEST-202ENST00000341441 CRYBG1Q9Y4K1 1723 aa20.63■□□□□ 0.89
MEST-202ENST00000341441 DBF4Q9UBU7 674 aaPredicted RBP20.63■□□□□ 0.89
MEST-202ENST00000341441 ZKSCAN5Q9Y2L8 839 aa20.63■□□□□ 0.89
MEST-202ENST00000341441 DIAPH3Q9NSV4 1193 aa20.63■□□□□ 0.89
MEST-202ENST00000341441 HSP90AA2PQ14568 343 aaPredicted RBP20.62■□□□□ 0.89
MEST-202ENST00000341441 PLEKHO1Q53GL0 409 aaPredicted RBP20.62■□□□□ 0.89
MEST-202ENST00000341441 CLASRPQ8N2M8 674 aaKnown RBP20.62■□□□□ 0.89
MEST-202ENST00000341441 TMEM87AQ8NBN3 555 aa20.62■□□□□ 0.89
MEST-202ENST00000341441 RBM33Q96EV2 1170 aaKnown RBP20.62■□□□□ 0.89
MEST-202ENST00000341441 MAP3K2Q9Y2U5 619 aa20.62■□□□□ 0.89
MEST-202ENST00000341441 RRP9O43818 475 aaKnown RBP20.62■□□□□ 0.89
MEST-202ENST00000341441 PHF14O94880 888 aa20.62■□□□□ 0.89
MEST-202ENST00000341441 ZSCAN22P10073 491 aaPredicted RBP20.62■□□□□ 0.89
MEST-202ENST00000341441 CPA1P15085 419 aa20.62■□□□□ 0.89
MEST-202ENST00000341441 LMO7Q8WWI1 1683 aa20.61■□□□□ 0.89
MEST-202ENST00000341441 CASTP20810 708 aaKnown RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms