RNA–Protein interactions for RNA: ENST00000341441.9

MEST-202, mesoderm specific transcript, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene MEST, Length 2,443 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEST-202ENST00000341441 NISCHQ9Y2I1 1504 aa35.29■■■■□ 3.24
MEST-202ENST00000341441 SHROOM4Q9ULL8 1493 aa30.13■■■□□ 2.41
MEST-202ENST00000341441 CCDC180Q9P1Z9 1646 aa29.94■■■□□ 2.38
MEST-202ENST00000341441 ZCCHC6Q5VYS8 1495 aaKnown RBP29.87■■■□□ 2.37
MEST-202ENST00000341441 SUPT5HO00267 1087 aaKnown RBP29.62■■■□□ 2.33
MEST-202ENST00000341441 DCAF8L2P0C7V8 631 aa29.18■■■□□ 2.26
MEST-202ENST00000341441 DCAF1Q9Y4B6 1507 aa28.96■■■□□ 2.23
MEST-202ENST00000341441 CHIC1Q5VXU3 224 aa28.89■■■□□ 2.22
MEST-202ENST00000341441 MYO15BQ96JP2 1530 aa28.79■■■□□ 2.2
MEST-202ENST00000341441 ABCC9O60706 1549 aa28.2■■■□□ 2.11
MEST-202ENST00000341441 HRCP23327 699 aa28.2■■■□□ 2.11
MEST-202ENST00000341441 PCGF6Q9BYE7 350 aa28.09■■■□□ 2.09
MEST-202ENST00000341441 SCRIBQ14160 1630 aa28.06■■■□□ 2.08
MEST-202ENST00000341441 LOC105371045A0A1W2PR82 267 aa28.02■■■□□ 2.08
MEST-202ENST00000341441 RSF1Q96T23 1441 aaPredicted RBP27.98■■■□□ 2.07
MEST-202ENST00000341441 RB1CC1Q8TDY2 1594 aa27.68■■■□□ 2.02
MEST-202ENST00000341441 NACADO15069 1562 aa27.65■■■□□ 2.02
MEST-202ENST00000341441 TRIM41Q8WV44 630 aa27.59■■■□□ 2.01
MEST-202ENST00000341441 PPARGC1BQ86YN6 1023 aaKnown RBP27.57■■■□□ 2
MEST-202ENST00000341441 TRIM26Q12899 539 aaPredicted RBP27.56■■■□□ 2
MEST-202ENST00000341441 CECR2Q9BXF3 1484 aa27.51■■■□□ 2
MEST-202ENST00000341441 MROH2BQ7Z745 1585 aa27.44■■□□□ 1.98
MEST-202ENST00000341441 FAM9AQ8IZU1 332 aaPredicted RBP27.35■■□□□ 1.97
MEST-202ENST00000341441 WIZO95785 1651 aa27.29■■□□□ 1.96
MEST-202ENST00000341441 BAZ1AQ9NRL2 1556 aaPredicted RBP27.14■■□□□ 1.93
MEST-202ENST00000341441 EHMT2Q96KQ7 1210 aa27.09■■□□□ 1.93
MEST-202ENST00000341441 ZEB1P37275 1124 aaPredicted RBP27■■□□□ 1.91
MEST-202ENST00000341441 EIF4G1Q04637 1599 aaKnown RBP26.99■■□□□ 1.91
MEST-202ENST00000341441 TOP2AP11388 1531 aaKnown RBP26.87■■□□□ 1.89
MEST-202ENST00000341441 SMARCA4P51532 1647 aa26.84■■□□□ 1.89
MEST-202ENST00000341441 CCDC88BA6NC98 1476 aa26.77■■□□□ 1.88
MEST-202ENST00000341441 UNC13AQ9UPW8 1703 aa26.77■■□□□ 1.88
MEST-202ENST00000341441 SMARCA2P51531 1590 aa26.73■■□□□ 1.87
MEST-202ENST00000341441 ABCC8Q09428 1581 aa26.72■■□□□ 1.87
MEST-202ENST00000341441 SOGA1O94964 1423 aa26.5■■□□□ 1.83
MEST-202ENST00000341441 WRNQ14191 1432 aaPredicted RBP eCLIP26.47■■□□□ 1.83
MEST-202ENST00000341441 BICRAQ9NZM4 1560 aa26.44■■□□□ 1.82
MEST-202ENST00000341441 CEP162Q5TB80 1403 aa26.44■■□□□ 1.82
MEST-202ENST00000341441 PABPN1Q86U42 306 aaKnown RBP eCLIP26.44■■□□□ 1.82
MEST-202ENST00000341441 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.41■■□□□ 1.82
MEST-202ENST00000341441 TNIKQ9UKE5 1360 aa26.4■■□□□ 1.82
MEST-202ENST00000341441 EEA1Q15075 1411 aa26.4■■□□□ 1.82
MEST-202ENST00000341441 CSRNP3Q8WYN3 585 aa26.37■■□□□ 1.81
MEST-202ENST00000341441 RUSC2Q8N2Y8 1516 aa26.37■■□□□ 1.81
MEST-202ENST00000341441 CCER1Q8TC90 406 aaPredicted RBP26.35■■□□□ 1.81
MEST-202ENST00000341441 PEG3Q9GZU2 1588 aa26.33■■□□□ 1.81
MEST-202ENST00000341441 UBTFP17480 764 aaKnown RBP26.26■■□□□ 1.79
MEST-202ENST00000341441 TTBK1Q5TCY1 1321 aaPredicted RBP26.26■■□□□ 1.79
MEST-202ENST00000341441 GOLGA3Q08378 1498 aa26.22■■□□□ 1.79
MEST-202ENST00000341441 SYNJ1O43426 1573 aa26.13■■□□□ 1.77
MEST-202ENST00000341441 ATAD2BQ9ULI0 1458 aa26.13■■□□□ 1.77
MEST-202ENST00000341441 CEP164Q9UPV0 1460 aa26.06■■□□□ 1.76
MEST-202ENST00000341441 BAZ1BQ9UIG0 1483 aaKnown RBP26.06■■□□□ 1.76
MEST-202ENST00000341441 SCAF1Q9H7N4 1312 aaKnown RBP26.04■■□□□ 1.76
MEST-202ENST00000341441 KIF21BO75037 1637 aa26.03■■□□□ 1.76
MEST-202ENST00000341441 CLIP1P30622 1438 aa25.93■■□□□ 1.74
MEST-202ENST00000341441 DIEXFQ68CQ4 756 aaKnown RBP25.9■■□□□ 1.74
MEST-202ENST00000341441 RAPGEF2Q9Y4G8 1499 aa25.85■■□□□ 1.73
MEST-202ENST00000341441 VPS8Q8N3P4 1428 aa25.84■■□□□ 1.73
MEST-202ENST00000341441 TOP2BQ02880 1626 aa25.81■■□□□ 1.72
MEST-202ENST00000341441 ACIN1Q9UKV3 1341 aaKnown RBP25.77■■□□□ 1.72
MEST-202ENST00000341441 HNRNPUL2Q1KMD3 747 aaKnown RBP25.75■■□□□ 1.71
MEST-202ENST00000341441 NEUROD1Q13562 356 aa25.72■■□□□ 1.71
MEST-202ENST00000341441 BIVM-ERCC5R4GMW8 1640 aa25.71■■□□□ 1.71
MEST-202ENST00000341441 APLP2Q06481 763 aa25.7■■□□□ 1.7
MEST-202ENST00000341441 ZNF316A6NFI3 1004 aaPredicted RBP25.69■■□□□ 1.7
MEST-202ENST00000341441 RANGAP1P46060 587 aaPredicted RBP25.68■■□□□ 1.7
MEST-202ENST00000341441 PELP1Q8IZL8 1130 aaKnown RBP25.62■■□□□ 1.69
MEST-202ENST00000341441 NCAPD3P42695 1498 aa25.61■■□□□ 1.69
MEST-202ENST00000341441 HMGXB3Q12766 1538 aa25.6■■□□□ 1.69
MEST-202ENST00000341441 ERICH3Q5RHP9 1530 aa25.6■■□□□ 1.69
MEST-202ENST00000341441 PRXQ9BXM0 1461 aa25.6■■□□□ 1.69
MEST-202ENST00000341441 CENPBP07199 599 aaPredicted RBP25.6■■□□□ 1.69
MEST-202ENST00000341441 CUX1P39880 1505 aa25.53■■□□□ 1.68
MEST-202ENST00000341441 ARAP1Q96P48 1450 aa25.5■■□□□ 1.67
MEST-202ENST00000341441 GTF3C3Q9Y5Q9 886 aa25.46■■□□□ 1.67
MEST-202ENST00000341441 KIF27Q86VH2 1401 aa25.45■■□□□ 1.66
MEST-202ENST00000341441 CFTRP13569 1480 aa25.43■■□□□ 1.66
MEST-202ENST00000341441 KANK4Q5T7N3 995 aaPredicted RBP25.38■■□□□ 1.65
MEST-202ENST00000341441 MIER1Q8N108 512 aa25.34■■□□□ 1.65
MEST-202ENST00000341441 CLSPNQ9HAW4 1339 aa25.3■■□□□ 1.64
MEST-202ENST00000341441 DHX57Q6P158 1386 aaKnown RBP25.29■■□□□ 1.64
MEST-202ENST00000341441 YTHDC1Q96MU7 727 aaKnown RBP25.27■■□□□ 1.64
MEST-202ENST00000341441 ARHGAP35Q9NRY4 1499 aa25.26■■□□□ 1.64
MEST-202ENST00000341441 RRBP1Q9P2E9 1410 aaKnown RBP25.26■■□□□ 1.63
MEST-202ENST00000341441 PRDM2Q13029 1718 aa25.21■■□□□ 1.63
MEST-202ENST00000341441 IGF1RP08069 1367 aa25.17■■□□□ 1.62
MEST-202ENST00000341441 CUX2O14529 1486 aa25.17■■□□□ 1.62
MEST-202ENST00000341441 CCNB3Q8WWL7 1395 aa25.14■■□□□ 1.61
MEST-202ENST00000341441 CADPSQ9ULU8 1353 aa25.12■■□□□ 1.61
MEST-202ENST00000341441 FGD5Q6ZNL6 1462 aa25.06■■□□□ 1.6
MEST-202ENST00000341441 CARMIL1Q5VZK9 1371 aa25.05■■□□□ 1.6
MEST-202ENST00000341441 ITGAEP38570 1179 aa25.01■■□□□ 1.59
MEST-202ENST00000341441 TIAM1Q13009 1591 aa25.01■■□□□ 1.59
MEST-202ENST00000341441 MAP3K1Q13233 1512 aa25■■□□□ 1.59
MEST-202ENST00000341441 RAB3GAP2Q9H2M9 1393 aa24.92■■□□□ 1.58
MEST-202ENST00000341441 LRRC9Q6ZRR7 1453 aa24.91■■□□□ 1.58
MEST-202ENST00000341441 FANCD2Q9BXW9 1451 aa24.87■■□□□ 1.57
MEST-202ENST00000341441 CC2D2AQ9P2K1 1620 aa24.87■■□□□ 1.57
MEST-202ENST00000341441 FHAD1B1AJZ9 1412 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms