RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 CPSF1Q10570 1443 aaKnown RBP16.96■□□□□ 0.3
ATXN3-201ENST00000340660 RGPD5Q99666 1765 aa16.95■□□□□ 0.3
ATXN3-201ENST00000340660 FCHSD2O94868 740 aa16.95■□□□□ 0.3
ATXN3-201ENST00000340660 FLAD1Q8NFF5 587 aa16.95■□□□□ 0.3
ATXN3-201ENST00000340660 KIF13BQ9NQT8 1826 aa16.93■□□□□ 0.3
ATXN3-201ENST00000340660 TGFB2P61812 414 aa16.92■□□□□ 0.3
ATXN3-201ENST00000340660 SYTL4Q96C24 671 aaPredicted RBP16.92■□□□□ 0.3
ATXN3-201ENST00000340660 MCOLN1Q9GZU1 580 aa16.92■□□□□ 0.3
ATXN3-201ENST00000340660 GPHNQ9NQX3 736 aaPredicted RBP16.92■□□□□ 0.3
ATXN3-201ENST00000340660 TOGARAM1Q9Y4F4 1720 aa16.91■□□□□ 0.3
ATXN3-201ENST00000340660 PRIM1P49642 420 aaKnown RBP16.91■□□□□ 0.3
ATXN3-201ENST00000340660 TRAK1Q9UPV9 953 aa16.91■□□□□ 0.3
ATXN3-201ENST00000340660 C5P01031 1676 aa16.91■□□□□ 0.3
ATXN3-201ENST00000340660 POTECB2RU33 542 aa16.9■□□□□ 0.3
ATXN3-201ENST00000340660 DLL1O00548 723 aa16.9■□□□□ 0.3
ATXN3-201ENST00000340660 GTPBP6O43824 516 aaPredicted RBP16.9■□□□□ 0.3
ATXN3-201ENST00000340660 DPEP1P16444 411 aa16.9■□□□□ 0.3
ATXN3-201ENST00000340660 FOXK1P85037 733 aa16.9■□□□□ 0.3
ATXN3-201ENST00000340660 ARHGEF25Q86VW2 580 aa16.9■□□□□ 0.3
ATXN3-201ENST00000340660 PCDHGA4Q9Y5G9 962 aa16.9■□□□□ 0.3
ATXN3-201ENST00000340660 BRCA1P38398 1863 aaKnown RBP16.9■□□□□ 0.3
ATXN3-201ENST00000340660 PLEKHG3A1L390 1219 aa16.89■□□□□ 0.29
ATXN3-201ENST00000340660 IL2RBP14784 551 aa16.89■□□□□ 0.29
ATXN3-201ENST00000340660 MMRN1Q13201 1228 aa16.89■□□□□ 0.29
ATXN3-201ENST00000340660 ANKRD36BQ8N2N9 1353 aa16.89■□□□□ 0.29
ATXN3-201ENST00000340660 ZNF316A6NFI3 1004 aaPredicted RBP16.88■□□□□ 0.29
ATXN3-201ENST00000340660 GLTPD2A6NH11 291 aa16.88■□□□□ 0.29
ATXN3-201ENST00000340660 ARFGEF1Q9Y6D6 1849 aa16.88■□□□□ 0.29
ATXN3-201ENST00000340660 ADGRB1O14514 1584 aa16.88■□□□□ 0.29
ATXN3-201ENST00000340660 NUDT7P0C024 238 aa16.87■□□□□ 0.29
ATXN3-201ENST00000340660 ZNF687Q8N1G0 1237 aa16.87■□□□□ 0.29
ATXN3-201ENST00000340660 SBF1O95248 1867 aa16.86■□□□□ 0.29
ATXN3-201ENST00000340660 KCNA3P22001 575 aa16.86■□□□□ 0.29
ATXN3-201ENST00000340660 DSG2Q14126 1118 aa16.86■□□□□ 0.29
ATXN3-201ENST00000340660 DCAF5Q96JK2 942 aa16.86■□□□□ 0.29
ATXN3-201ENST00000340660 DOT1LQ8TEK3 1739 aa16.86■□□□□ 0.29
ATXN3-201ENST00000340660 MAP2K1Q02750 393 aaPredicted RBP16.85■□□□□ 0.29
ATXN3-201ENST00000340660 PLPP6Q8IY26 295 aa16.85■□□□□ 0.29
ATXN3-201ENST00000340660 ZC3H4Q9UPT8 1303 aaKnown RBP16.85■□□□□ 0.29
ATXN3-201ENST00000340660 PHF14O94880 888 aa16.84■□□□□ 0.29
ATXN3-201ENST00000340660 DDX54Q8TDD1 881 aaKnown RBP16.84■□□□□ 0.29
ATXN3-201ENST00000340660 PASKQ96RG2 1323 aa16.84■□□□□ 0.29
ATXN3-201ENST00000340660 KDM6AO15550 1401 aaPredicted RBP16.83■□□□□ 0.28
ATXN3-201ENST00000340660 MMP10P09238 476 aa16.83■□□□□ 0.28
ATXN3-201ENST00000340660 SOX10P56693 466 aa16.83■□□□□ 0.28
ATXN3-201ENST00000340660 HABP4Q5JVS0 413 aaKnown RBP16.83■□□□□ 0.28
ATXN3-201ENST00000340660 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.82■□□□□ 0.28
ATXN3-201ENST00000340660 CDK19Q9BWU1 502 aa16.82■□□□□ 0.28
ATXN3-201ENST00000340660 USP47Q96K76 1375 aa16.81■□□□□ 0.28
ATXN3-201ENST00000340660 ITGAEP38570 1179 aa16.81■□□□□ 0.28
ATXN3-201ENST00000340660 CRISPLD2Q9H0B8 497 aa16.81■□□□□ 0.28
ATXN3-201ENST00000340660 TAF1LQ8IZX4 1826 aa16.81■□□□□ 0.28
ATXN3-201ENST00000340660 C4BP0C0L5 1744 aa16.81■□□□□ 0.28
ATXN3-201ENST00000340660 UBR3Q6ZT12 1888 aa16.8■□□□□ 0.28
ATXN3-201ENST00000340660 RASSF7Q02833 373 aa16.8■□□□□ 0.28
ATXN3-201ENST00000340660 GCC1Q96CN9 775 aa16.8■□□□□ 0.28
ATXN3-201ENST00000340660 NLRP2Q9NX02 1062 aa16.8■□□□□ 0.28
ATXN3-201ENST00000340660 TSKSQ9UJT2 592 aa16.8■□□□□ 0.28
ATXN3-201ENST00000340660 TMEM88BA6NKF7 163 aa16.79■□□□□ 0.28
ATXN3-201ENST00000340660 PTCD2Q8WV60 388 aaKnown RBP16.79■□□□□ 0.28
ATXN3-201ENST00000340660 WDR33Q9C0J8 1336 aaKnown RBP16.78■□□□□ 0.28
ATXN3-201ENST00000340660 A0A0C4DFX4 3053 aa16.78■□□□□ 0.28
ATXN3-201ENST00000340660 RASSF10A6NK89 507 aa16.78■□□□□ 0.28
ATXN3-201ENST00000340660 AK7Q96M32 723 aa16.78■□□□□ 0.28
ATXN3-201ENST00000340660 LHX6Q9UPM6 363 aa16.78■□□□□ 0.28
ATXN3-201ENST00000340660 CUL9Q8IWT3 2517 aa16.77■□□□□ 0.28
ATXN3-201ENST00000340660 PIM2Q9P1W9 311 aa16.76■□□□□ 0.27
ATXN3-201ENST00000340660 THSD7BQ9C0I4 1608 aa16.75■□□□□ 0.27
ATXN3-201ENST00000340660 DGKZQ13574 1117 aa16.75■□□□□ 0.27
ATXN3-201ENST00000340660 DALRD3Q5D0E6 543 aaKnown RBP16.75■□□□□ 0.27
ATXN3-201ENST00000340660 LTBP1Q14766 1721 aa16.75■□□□□ 0.27
ATXN3-201ENST00000340660 SSFA2P28290 1259 aa16.74■□□□□ 0.27
ATXN3-201ENST00000340660 DEFB115Q30KQ5 88 aa16.74■□□□□ 0.27
ATXN3-201ENST00000340660 NFAT5O94916 1531 aa16.74■□□□□ 0.27
ATXN3-201ENST00000340660 TIAM2Q8IVF5 1701 aa16.73■□□□□ 0.27
ATXN3-201ENST00000340660 FXR1P51114 621 aaKnown RBP eCLIP16.73■□□□□ 0.27
ATXN3-201ENST00000340660 NSD3Q9BZ95 1437 aa16.72■□□□□ 0.27
ATXN3-201ENST00000340660 LMNB1P20700 586 aa16.71■□□□□ 0.27
ATXN3-201ENST00000340660 KCNH5Q8NCM2 988 aa16.71■□□□□ 0.27
ATXN3-201ENST00000340660 PALLDQ8WX93 1383 aa16.7■□□□□ 0.26
ATXN3-201ENST00000340660 ITGBL1O95965 494 aaPredicted RBP16.7■□□□□ 0.26
ATXN3-201ENST00000340660 AMER1Q5JTC6 1135 aaPredicted RBP16.7■□□□□ 0.26
ATXN3-201ENST00000340660 BEGAINQ9BUH8 593 aa16.7■□□□□ 0.26
ATXN3-201ENST00000340660 CCDC87Q9NVE4 849 aa16.7■□□□□ 0.26
ATXN3-201ENST00000340660 PPP1R15BQ5SWA1 713 aa16.68■□□□□ 0.26
ATXN3-201ENST00000340660 SZT2Q5T011 3432 aa16.68■□□□□ 0.26
ATXN3-201ENST00000340660 CASP8AP2Q9UKL3 1982 aa16.68■□□□□ 0.26
ATXN3-201ENST00000340660 C4AP0C0L4 1744 aa16.67■□□□□ 0.26
ATXN3-201ENST00000340660 HMGB2P26583 209 aaKnown RBP16.67■□□□□ 0.26
ATXN3-201ENST00000340660 PDE4AP27815 886 aa16.67■□□□□ 0.26
ATXN3-201ENST00000340660 PITPNM2Q9BZ72 1349 aa16.67■□□□□ 0.26
ATXN3-201ENST00000340660 RTN4Q9NQC3 1192 aaKnown RBP16.66■□□□□ 0.26
ATXN3-201ENST00000340660 CHRNA5P30532 468 aa16.65■□□□□ 0.26
ATXN3-201ENST00000340660 POTEEQ6S8J3 1075 aa16.65■□□□□ 0.26
ATXN3-201ENST00000340660 OXER1Q8TDS5 423 aa16.65■□□□□ 0.26
ATXN3-201ENST00000340660 ADAMTS7Q9UKP4 1686 aa16.65■□□□□ 0.26
ATXN3-201ENST00000340660 LDHDQ86WU2 507 aa16.64■□□□□ 0.25
ATXN3-201ENST00000340660 LINC00116Q8NCU8 138 aa16.64■□□□□ 0.25
ATXN3-201ENST00000340660 ANKRD24Q8TF21 1146 aa16.64■□□□□ 0.25
ATXN3-201ENST00000340660 NBPF15Q8N660 670 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms