RNA–Protein interactions for RNA: ENST00000340650.5

NHLRC1-201, Transcript of NHL repeat containing E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 BASIC

Gene NHLRC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1-201ENST00000340650 CCDC30Q5VVM6 783 aa24.09■■□□□ 1.45
NHLRC1-201ENST00000340650 LARP1Q6PKG0 1096 aaKnown RBP24.08■■□□□ 1.45
NHLRC1-201ENST00000340650 PTPRCP08575 1304 aa24.08■■□□□ 1.45
NHLRC1-201ENST00000340650 BAG4O95429 457 aaKnown RBP24.08■■□□□ 1.45
NHLRC1-201ENST00000340650 EVA1CP58658 441 aa24.08■■□□□ 1.45
NHLRC1-201ENST00000340650 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.08■■□□□ 1.45
NHLRC1-201ENST00000340650 CYP27B1O15528 508 aa24.07■■□□□ 1.44
NHLRC1-201ENST00000340650 EIF2S2P20042 333 aaKnown RBP24.07■■□□□ 1.44
NHLRC1-201ENST00000340650 HDGFL1Q5TGJ6 251 aa24.07■■□□□ 1.44
NHLRC1-201ENST00000340650 IFNL2Q8IZJ0 200 aa24.07■■□□□ 1.44
NHLRC1-201ENST00000340650 OVOS2A0A0G2JMS6 1433 aa24.07■■□□□ 1.44
NHLRC1-201ENST00000340650 KDM6AO15550 1401 aaPredicted RBP24.07■■□□□ 1.44
NHLRC1-201ENST00000340650 F6X3S4 739 aa24.06■■□□□ 1.44
NHLRC1-201ENST00000340650 PIP4K2BP78356 416 aa24.06■■□□□ 1.44
NHLRC1-201ENST00000340650 RABEP1Q15276 862 aa24.06■■□□□ 1.44
NHLRC1-201ENST00000340650 KDM3BQ7LBC6 1761 aa24.05■■□□□ 1.44
NHLRC1-201ENST00000340650 GSPT1P15170 499 aaKnown RBP24.05■■□□□ 1.44
NHLRC1-201ENST00000340650 NASPP49321 788 aaPredicted RBP24.05■■□□□ 1.44
NHLRC1-201ENST00000340650 AHDC1Q5TGY3 1603 aaPredicted RBP24.05■■□□□ 1.44
NHLRC1-201ENST00000340650 TPM2P07951 284 aa24.04■■□□□ 1.44
NHLRC1-201ENST00000340650 BTG4Q9NY30 223 aa24.04■■□□□ 1.44
NHLRC1-201ENST00000340650 FLIIQ13045 1269 aa24.03■■□□□ 1.44
NHLRC1-201ENST00000340650 INTS3Q68E01 1043 aaKnown RBP24.03■■□□□ 1.44
NHLRC1-201ENST00000340650 SLC4A10Q6U841 1118 aa24.03■■□□□ 1.44
NHLRC1-201ENST00000340650 PLEKHM2Q8IWE5 1019 aa24.03■■□□□ 1.44
NHLRC1-201ENST00000340650 DDX49Q9Y6V7 483 aaKnown RBP24.03■■□□□ 1.44
NHLRC1-201ENST00000340650 SOS1Q07889 1333 aaPredicted RBP24.03■■□□□ 1.44
NHLRC1-201ENST00000340650 NFATC2IPQ8NCF5 419 aa24.03■■□□□ 1.44
NHLRC1-201ENST00000340650 CARD10Q9BWT7 1032 aa24.03■■□□□ 1.44
NHLRC1-201ENST00000340650 ZNF445P59923 1031 aa24.02■■□□□ 1.44
NHLRC1-201ENST00000340650 SLC52A2Q9HAB3 445 aa24.02■■□□□ 1.44
NHLRC1-201ENST00000340650 SLC39A6Q13433 755 aa24.02■■□□□ 1.44
NHLRC1-201ENST00000340650 FKBP5Q13451 457 aaPredicted RBP24.02■■□□□ 1.44
NHLRC1-201ENST00000340650 ADAMTS7Q9UKP4 1686 aa24.01■■□□□ 1.43
NHLRC1-201ENST00000340650 CYP2E1P05181 493 aaPredicted RBP24.01■■□□□ 1.43
NHLRC1-201ENST00000340650 NUCB2P80303 420 aa24.01■■□□□ 1.43
NHLRC1-201ENST00000340650 ZSCAN30Q86W11 494 aa24■■□□□ 1.43
NHLRC1-201ENST00000340650 DCAF5Q96JK2 942 aa24■■□□□ 1.43
NHLRC1-201ENST00000340650 DCTPP1Q9H773 170 aa24■■□□□ 1.43
NHLRC1-201ENST00000340650 PRAMEF22A3QJZ6 481 aa24■■□□□ 1.43
NHLRC1-201ENST00000340650 TTC22Q5TAA0 569 aa24■■□□□ 1.43
NHLRC1-201ENST00000340650 PKD1L3Q7Z443 1732 aa24■■□□□ 1.43
NHLRC1-201ENST00000340650 IL2RBP14784 551 aa23.99■■□□□ 1.43
NHLRC1-201ENST00000340650 ZCRB1Q8TBF4 217 aaKnown RBP23.99■■□□□ 1.43
NHLRC1-201ENST00000340650 ANP32BQ92688 251 aaKnown RBP23.99■■□□□ 1.43
NHLRC1-201ENST00000340650 PHAXQ9H814 394 aaKnown RBP23.99■■□□□ 1.43
NHLRC1-201ENST00000340650 CHPF2Q9P2E5 772 aa23.99■■□□□ 1.43
NHLRC1-201ENST00000340650 SIPA1L3O60292 1781 aaPredicted RBP23.98■■□□□ 1.43
NHLRC1-201ENST00000340650 USP26Q9BXU7 913 aa23.98■■□□□ 1.43
NHLRC1-201ENST00000340650 SCN11AQ9UI33 1791 aa23.98■■□□□ 1.43
NHLRC1-201ENST00000340650 ANXA1P04083 346 aa23.98■■□□□ 1.43
NHLRC1-201ENST00000340650 HOXB7P09629 217 aa23.98■■□□□ 1.43
NHLRC1-201ENST00000340650 PLEKHG2Q9H7P9 1386 aa23.97■■□□□ 1.43
NHLRC1-201ENST00000340650 TOM1O60784 492 aa23.97■■□□□ 1.43
NHLRC1-201ENST00000340650 GIGYF1O75420 1035 aaPredicted RBP23.97■■□□□ 1.43
NHLRC1-201ENST00000340650 ZNF790Q6PG37 636 aa23.96■■□□□ 1.43
NHLRC1-201ENST00000340650 PCDH11XQ9BZA7 1347 aa23.96■■□□□ 1.43
NHLRC1-201ENST00000340650 PCDH11YQ9BZA8 1340 aa23.96■■□□□ 1.43
NHLRC1-201ENST00000340650 DDX54Q8TDD1 881 aaKnown RBP23.96■■□□□ 1.43
NHLRC1-201ENST00000340650 LMBRD1Q9NUN5 540 aa23.96■■□□□ 1.43
NHLRC1-201ENST00000340650 PARP4Q9UKK3 1724 aaKnown RBP23.96■■□□□ 1.43
NHLRC1-201ENST00000340650 ADAMTS2O95450 1211 aa23.95■■□□□ 1.42
NHLRC1-201ENST00000340650 MEIS3Q99687 375 aa23.95■■□□□ 1.42
NHLRC1-201ENST00000340650 PHLPP1O60346 1717 aa23.95■■□□□ 1.42
NHLRC1-201ENST00000340650 CWC22Q9HCG8 908 aaKnown RBP23.95■■□□□ 1.42
NHLRC1-201ENST00000340650 AK9Q5TCS8 1911 aa23.94■■□□□ 1.42
NHLRC1-201ENST00000340650 HS1BP3Q53T59 392 aa23.94■■□□□ 1.42
NHLRC1-201ENST00000340650 MCTP1Q6DN14 999 aa23.94■■□□□ 1.42
NHLRC1-201ENST00000340650 HEG1Q9ULI3 1381 aa23.94■■□□□ 1.42
NHLRC1-201ENST00000340650 OFD1O75665 1012 aa23.94■■□□□ 1.42
NHLRC1-201ENST00000340650 CABP4P57796 275 aa23.94■■□□□ 1.42
NHLRC1-201ENST00000340650 COL22A1Q8NFW1 1626 aaPredicted RBP23.93■■□□□ 1.42
NHLRC1-201ENST00000340650 CCT4P50991 539 aaKnown RBP23.92■■□□□ 1.42
NHLRC1-201ENST00000340650 ZSCAN23Q3MJ62 389 aa23.92■■□□□ 1.42
NHLRC1-201ENST00000340650 COL16A1Q07092 1604 aaPredicted RBP23.92■■□□□ 1.42
NHLRC1-201ENST00000340650 ATP10DQ9P241 1426 aa23.92■■□□□ 1.42
NHLRC1-201ENST00000340650 UBAP1LF5GYI3 381 aa23.92■■□□□ 1.42
NHLRC1-201ENST00000340650 ANKRD44Q8N8A2 993 aa23.92■■□□□ 1.42
NHLRC1-201ENST00000340650 KIAA1211Q6ZU35 1233 aa23.91■■□□□ 1.42
NHLRC1-201ENST00000340650 NUTM2BA6NNL0 878 aaPredicted RBP23.91■■□□□ 1.42
NHLRC1-201ENST00000340650 NUTM2EB1AL46 878 aaPredicted RBP23.91■■□□□ 1.42
NHLRC1-201ENST00000340650 PROSER3Q2NL68 480 aa23.91■■□□□ 1.42
NHLRC1-201ENST00000340650 NUTM2AQ8IVF1 878 aaPredicted RBP23.91■■□□□ 1.42
NHLRC1-201ENST00000340650 ZNF496Q96IT1 587 aaPredicted RBP23.91■■□□□ 1.42
NHLRC1-201ENST00000340650 COL14A1Q05707 1796 aaKnown RBP23.91■■□□□ 1.42
NHLRC1-201ENST00000340650 MRC1P22897 1456 aa23.9■■□□□ 1.42
NHLRC1-201ENST00000340650 TERF1P54274 439 aa23.9■■□□□ 1.42
NHLRC1-201ENST00000340650 CAVIN1Q6NZI2 390 aaKnown RBP23.9■■□□□ 1.42
NHLRC1-201ENST00000340650 TTC5Q8N0Z6 440 aa23.9■■□□□ 1.42
NHLRC1-201ENST00000340650 MSNP26038 577 aaKnown RBP23.89■■□□□ 1.41
NHLRC1-201ENST00000340650 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.89■■□□□ 1.41
NHLRC1-201ENST00000340650 C16orf71Q8IYS4 520 aaPredicted RBP23.89■■□□□ 1.41
NHLRC1-201ENST00000340650 PDLIM2Q96JY6 352 aa23.89■■□□□ 1.41
NHLRC1-201ENST00000340650 CHMP4AQ9BY43 222 aa23.89■■□□□ 1.41
NHLRC1-201ENST00000340650 DBF4Q9UBU7 674 aaPredicted RBP23.89■■□□□ 1.41
NHLRC1-201ENST00000340650 RPAP2Q8IXW5 612 aaPredicted RBP23.88■■□□□ 1.41
NHLRC1-201ENST00000340650 CACNA1FO60840 1977 aa23.88■■□□□ 1.41
NHLRC1-201ENST00000340650 ST18O60284 1047 aa23.87■■□□□ 1.41
NHLRC1-201ENST00000340650 SDSP20132 328 aa23.87■■□□□ 1.41
NHLRC1-201ENST00000340650 PKP1Q13835 747 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms