RNA–Protein interactions for RNA: ENST00000340042.1

GLI4-201, Transcript of GLI family zinc finger 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GLI4, Length 1,341 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GLI4-201ENST00000340042 MAPK8IP3Q9UPT6 1336 aa28.46■■■□□ 2.15
GLI4-201ENST00000340042 ZBTB1Q9Y2K1 713 aa28.46■■■□□ 2.15
GLI4-201ENST00000340042 STARD3NLO95772 234 aa28.45■■■□□ 2.15
GLI4-201ENST00000340042 SRP68Q9UHB9 627 aaKnown RBP28.45■■■□□ 2.15
GLI4-201ENST00000340042 COL15A1P39059 1388 aa28.44■■■□□ 2.14
GLI4-201ENST00000340042 C1QTNF8P60827 252 aa28.43■■■□□ 2.14
GLI4-201ENST00000340042 KCNQ3O43525 872 aa28.43■■■□□ 2.14
GLI4-201ENST00000340042 TEX13AQ9BXU3 409 aaPredicted RBP28.43■■■□□ 2.14
GLI4-201ENST00000340042 NFE2L2Q16236 605 aa28.42■■■□□ 2.14
GLI4-201ENST00000340042 ZPR1O75312 459 aa28.41■■■□□ 2.14
GLI4-201ENST00000340042 CANXP27824 592 aaKnown RBP28.41■■■□□ 2.14
GLI4-201ENST00000340042 FKBP8Q14318 412 aa28.4■■■□□ 2.14
GLI4-201ENST00000340042 PRKRIP1Q9H875 184 aaPredicted RBP28.4■■■□□ 2.14
GLI4-201ENST00000340042 PARP3Q9Y6F1 533 aa28.4■■■□□ 2.14
GLI4-201ENST00000340042 DLG5Q8TDM6 1919 aa28.39■■■□□ 2.13
GLI4-201ENST00000340042 USPL1Q5W0Q7 1092 aa28.38■■■□□ 2.13
GLI4-201ENST00000340042 C10orf71Q711Q0 1435 aa28.37■■■□□ 2.13
GLI4-201ENST00000340042 TAF7Q15545 349 aaPredicted RBP28.37■■■□□ 2.13
GLI4-201ENST00000340042 NARFQ9UHQ1 456 aa28.36■■■□□ 2.13
GLI4-201ENST00000340042 GIGYF1O75420 1035 aaPredicted RBP28.35■■■□□ 2.13
GLI4-201ENST00000340042 WDR43Q15061 677 aaKnown RBP eCLIP28.35■■■□□ 2.13
GLI4-201ENST00000340042 EIF5P55010 431 aaKnown RBP28.34■■■□□ 2.13
GLI4-201ENST00000340042 ZNF330Q9Y3S2 320 aaPredicted RBP28.34■■■□□ 2.13
GLI4-201ENST00000340042 KIF13BQ9NQT8 1826 aa28.34■■■□□ 2.13
GLI4-201ENST00000340042 DDR1Q08345 913 aa28.33■■■□□ 2.13
GLI4-201ENST00000340042 THUMPD2Q9BTF0 503 aaKnown RBP28.33■■■□□ 2.13
GLI4-201ENST00000340042 PXDNLA1KZ92 1463 aa28.32■■■□□ 2.12
GLI4-201ENST00000340042 A0A087WZG4 1122 aa28.32■■■□□ 2.12
GLI4-201ENST00000340042 SNRPA1P09661 255 aaKnown RBP28.32■■■□□ 2.12
GLI4-201ENST00000340042 PNISRQ8TF01 805 aaKnown RBP28.32■■■□□ 2.12
GLI4-201ENST00000340042 MIS18AQ9NYP9 233 aa28.32■■■□□ 2.12
GLI4-201ENST00000340042 WWC3Q9ULE0 1092 aa28.32■■■□□ 2.12
GLI4-201ENST00000340042 PRAMEF22A3QJZ6 481 aa28.31■■■□□ 2.12
GLI4-201ENST00000340042 A1BGP04217 495 aa28.31■■■□□ 2.12
GLI4-201ENST00000340042 IL6STP40189 918 aaPredicted RBP28.31■■■□□ 2.12
GLI4-201ENST00000340042 SENP3-EIF4A1A0A087X0R7 540 aa28.3■■■□□ 2.12
GLI4-201ENST00000340042 USP16Q9Y5T5 823 aa28.3■■■□□ 2.12
GLI4-201ENST00000340042 POLRMTO00411 1230 aaKnown RBP28.29■■■□□ 2.12
GLI4-201ENST00000340042 TM4SF1P30408 202 aa28.29■■■□□ 2.12
GLI4-201ENST00000340042 RIPK4P57078 832 aa28.29■■■□□ 2.12
GLI4-201ENST00000340042 TGFB2P61812 414 aa28.29■■■□□ 2.12
GLI4-201ENST00000340042 NPM2Q86SE8 214 aaKnown RBP28.29■■■□□ 2.12
GLI4-201ENST00000340042 CCDC146Q8IYE0 955 aa28.29■■■□□ 2.12
GLI4-201ENST00000340042 BCL2L12Q9HB09 334 aa28.28■■■□□ 2.12
GLI4-201ENST00000340042 KDM3BQ7LBC6 1761 aa28.28■■■□□ 2.12
GLI4-201ENST00000340042 KIAA1551Q9HCM1 1747 aa28.27■■■□□ 2.12
GLI4-201ENST00000340042 TMPOP42166 694 aaKnown RBP28.27■■■□□ 2.12
GLI4-201ENST00000340042 NFIXQ14938 502 aa28.27■■■□□ 2.12
GLI4-201ENST00000340042 SCN7AQ01118 1682 aa28.27■■■□□ 2.12
GLI4-201ENST00000340042 ZNF316A6NFI3 1004 aaPredicted RBP28.26■■■□□ 2.11
GLI4-201ENST00000340042 LMOD3Q0VAK6 560 aa28.26■■■□□ 2.11
GLI4-201ENST00000340042 TBC1D2BQ9UPU7 963 aa28.25■■■□□ 2.11
GLI4-201ENST00000340042 N4BP2Q86UW6 1770 aaPredicted RBP28.24■■■□□ 2.11
GLI4-201ENST00000340042 A0A0G2JLW4 131 aa28.24■■■□□ 2.11
GLI4-201ENST00000340042 PIP4K2AP48426 406 aaPredicted RBP28.24■■■□□ 2.11
GLI4-201ENST00000340042 RUNDC1Q96C34 613 aa28.24■■■□□ 2.11
GLI4-201ENST00000340042 ADAMTS8Q9UP79 889 aa28.24■■■□□ 2.11
GLI4-201ENST00000340042 RRP7AQ9Y3A4 280 aaKnown RBP28.24■■■□□ 2.11
GLI4-201ENST00000340042 DPEP1P16444 411 aa28.22■■■□□ 2.11
GLI4-201ENST00000340042 LAMB4A4D0S4 1761 aa28.22■■■□□ 2.11
GLI4-201ENST00000340042 ATP10DQ9P241 1426 aa28.21■■■□□ 2.11
GLI4-201ENST00000340042 NEUROD2Q15784 382 aa28.21■■■□□ 2.11
GLI4-201ENST00000340042 BICDL1Q6ZP65 573 aa28.21■■■□□ 2.11
GLI4-201ENST00000340042 EIF4A1P60842 406 aaKnown RBP28.2■■■□□ 2.11
GLI4-201ENST00000340042 DZIP3Q86Y13 1208 aaKnown RBP28.2■■■□□ 2.11
GLI4-201ENST00000340042 TSPYL4Q9UJ04 414 aa28.2■■■□□ 2.11
GLI4-201ENST00000340042 SERPINB2P05120 415 aa28.19■■■□□ 2.1
GLI4-201ENST00000340042 GPBP1L1Q9HC44 474 aaPredicted RBP28.19■■■□□ 2.1
GLI4-201ENST00000340042 CAMTA2O94983 1202 aa28.18■■■□□ 2.1
GLI4-201ENST00000340042 TBC1D9BQ66K14 1250 aa28.18■■■□□ 2.1
GLI4-201ENST00000340042 BCS1LQ9Y276 419 aa28.18■■■□□ 2.1
GLI4-201ENST00000340042 NRXN2Q9P2S2 1712 aa28.18■■■□□ 2.1
GLI4-201ENST00000340042 NBPF26B4DH59 902 aa28.18■■■□□ 2.1
GLI4-201ENST00000340042 NBPF10Q6P3W6 841 aaKnown RBP28.18■■■□□ 2.1
GLI4-201ENST00000340042 NBPF15Q8N660 670 aa28.18■■■□□ 2.1
GLI4-201ENST00000340042 AFDNP55196 1824 aaKnown RBP28.17■■■□□ 2.1
GLI4-201ENST00000340042 BCORQ6W2J9 1755 aa28.17■■■□□ 2.1
GLI4-201ENST00000340042 ADCY9O60503 1353 aa28.17■■■□□ 2.1
GLI4-201ENST00000340042 CARMIL3Q8ND23 1372 aa28.15■■■□□ 2.1
GLI4-201ENST00000340042 KCNA3P22001 575 aa28.15■■■□□ 2.1
GLI4-201ENST00000340042 BABAM1Q9NWV8 329 aa28.15■■■□□ 2.1
GLI4-201ENST00000340042 BRCA1P38398 1863 aaKnown RBP28.14■■■□□ 2.1
GLI4-201ENST00000340042 CHRNA5P30532 468 aa28.14■■■□□ 2.09
GLI4-201ENST00000340042 PIM2Q9P1W9 311 aa28.14■■■□□ 2.09
GLI4-201ENST00000340042 TRIM35Q9UPQ4 493 aa28.13■■■□□ 2.09
GLI4-201ENST00000340042 SETDB2Q96T68 719 aa28.12■■■□□ 2.09
GLI4-201ENST00000340042 ZNF652Q9Y2D9 606 aa28.12■■■□□ 2.09
GLI4-201ENST00000340042 DALRD3Q5D0E6 543 aaKnown RBP28.1■■■□□ 2.09
GLI4-201ENST00000340042 CLEC4GQ6UXB4 293 aa28.1■■■□□ 2.09
GLI4-201ENST00000340042 ZNF526Q8TF50 670 aaPredicted RBP28.09■■■□□ 2.09
GLI4-201ENST00000340042 NPHP1O15259 732 aa28.08■■■□□ 2.09
GLI4-201ENST00000340042 ANP32CO43423 234 aa28.08■■■□□ 2.09
GLI4-201ENST00000340042 LAS1LQ9Y4W2 734 aaKnown RBP28.08■■■□□ 2.09
GLI4-201ENST00000340042 CCDC184Q52MB2 194 aa28.07■■■□□ 2.08
GLI4-201ENST00000340042 PRR5LQ6MZQ0 368 aa28.07■■■□□ 2.08
GLI4-201ENST00000340042 NGEFQ8N5V2 710 aa28.07■■■□□ 2.08
GLI4-201ENST00000340042 CNBD1Q8NA66 436 aa28.07■■■□□ 2.08
GLI4-201ENST00000340042 APAF1O14727 1248 aa28.06■■■□□ 2.08
GLI4-201ENST00000340042 RGL2O15211 777 aa28.06■■■□□ 2.08
GLI4-201ENST00000340042 MYL6BP14649 208 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 142 ms