RNA–Protein interactions for RNA: ENST00000339436.11

SRSF3-201, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 1,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-201ENST00000339436 IFT57Q9NWB7 429 aa16.78■□□□□ 0.28
SRSF3-201ENST00000339436 BCORQ6W2J9 1755 aa16.77■□□□□ 0.28
SRSF3-201ENST00000339436 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.77■□□□□ 0.28
SRSF3-201ENST00000339436 STARD3NLO95772 234 aa16.77■□□□□ 0.28
SRSF3-201ENST00000339436 ZNF853P0CG23 659 aa16.77■□□□□ 0.28
SRSF3-201ENST00000339436 INTS5Q6P9B9 1019 aaKnown RBP16.77■□□□□ 0.28
SRSF3-201ENST00000339436 PRAMEF22A3QJZ6 481 aa16.76■□□□□ 0.27
SRSF3-201ENST00000339436 PHF14O94880 888 aa16.76■□□□□ 0.27
SRSF3-201ENST00000339436 COL23A1Q86Y22 540 aaPredicted RBP16.76■□□□□ 0.27
SRSF3-201ENST00000339436 FLAD1Q8NFF5 587 aa16.76■□□□□ 0.27
SRSF3-201ENST00000339436 ZBTB1Q9Y2K1 713 aa16.76■□□□□ 0.27
SRSF3-201ENST00000339436 RTCBQ9Y3I0 505 aaKnown RBP16.76■□□□□ 0.27
SRSF3-201ENST00000339436 LAS1LQ9Y4W2 734 aaKnown RBP16.76■□□□□ 0.27
SRSF3-201ENST00000339436 SOS1Q07889 1333 aaPredicted RBP16.76■□□□□ 0.27
SRSF3-201ENST00000339436 GIGYF1O75420 1035 aaPredicted RBP16.75■□□□□ 0.27
SRSF3-201ENST00000339436 RPS6KA4O75676 772 aa16.75■□□□□ 0.27
SRSF3-201ENST00000339436 ADRA2BP18089 450 aa16.75■□□□□ 0.27
SRSF3-201ENST00000339436 GNAI1P63096 354 aa16.75■□□□□ 0.27
SRSF3-201ENST00000339436 SMIM5Q71RC9 77 aa16.75■□□□□ 0.27
SRSF3-201ENST00000339436 MBIPQ9NS73 344 aa16.75■□□□□ 0.27
SRSF3-201ENST00000339436 SALL2Q9Y467 1007 aaPredicted RBP16.75■□□□□ 0.27
SRSF3-201ENST00000339436 IL16Q14005 1332 aa16.75■□□□□ 0.27
SRSF3-201ENST00000339436 COL15A1P39059 1388 aa16.75■□□□□ 0.27
SRSF3-201ENST00000339436 ZBTB7AO95365 584 aa16.74■□□□□ 0.27
SRSF3-201ENST00000339436 USP16Q9Y5T5 823 aa16.74■□□□□ 0.27
SRSF3-201ENST00000339436 ZNF521Q96K83 1311 aa16.73■□□□□ 0.27
SRSF3-201ENST00000339436 SLC16A10Q8TF71 515 aa16.73■□□□□ 0.27
SRSF3-201ENST00000339436 MTFR1LQ9H019 292 aa16.73■□□□□ 0.27
SRSF3-201ENST00000339436 WDR63Q8IWG1 891 aa16.72■□□□□ 0.27
SRSF3-201ENST00000339436 CACNA1FO60840 1977 aa16.72■□□□□ 0.27
SRSF3-201ENST00000339436 MSH5O43196 834 aa16.71■□□□□ 0.27
SRSF3-201ENST00000339436 A1BGP04217 495 aa16.71■□□□□ 0.27
SRSF3-201ENST00000339436 KRT24Q2M2I5 525 aa16.71■□□□□ 0.27
SRSF3-201ENST00000339436 TRAPPC3LQ5T215 181 aa16.71■□□□□ 0.27
SRSF3-201ENST00000339436 CANXP27824 592 aaKnown RBP16.7■□□□□ 0.26
SRSF3-201ENST00000339436 EIF5P55010 431 aaKnown RBP16.7■□□□□ 0.26
SRSF3-201ENST00000339436 ARHGEF1Q92888 912 aaKnown RBP16.7■□□□□ 0.26
SRSF3-201ENST00000339436 SPON1Q9HCB6 807 aa16.7■□□□□ 0.26
SRSF3-201ENST00000339436 HOXB7P09629 217 aa16.7■□□□□ 0.26
SRSF3-201ENST00000339436 IL6STP40189 918 aaPredicted RBP16.7■□□□□ 0.26
SRSF3-201ENST00000339436 TSR2Q969E8 191 aaKnown RBP16.7■□□□□ 0.26
SRSF3-201ENST00000339436 USP42Q9H9J4 1324 aaKnown RBP16.69■□□□□ 0.26
SRSF3-201ENST00000339436 FANCIQ9NVI1 1328 aa16.69■□□□□ 0.26
SRSF3-201ENST00000339436 NUP98P52948 1817 aa16.69■□□□□ 0.26
SRSF3-201ENST00000339436 RFC4P35249 363 aa16.69■□□□□ 0.26
SRSF3-201ENST00000339436 ERBB4Q15303 1308 aa16.69■□□□□ 0.26
SRSF3-201ENST00000339436 NBPF26B4DH59 902 aa16.68■□□□□ 0.26
SRSF3-201ENST00000339436 PTGER2P43116 358 aa16.68■□□□□ 0.26
SRSF3-201ENST00000339436 PIP4K2AP48426 406 aaPredicted RBP16.68■□□□□ 0.26
SRSF3-201ENST00000339436 NBPF10Q6P3W6 841 aaKnown RBP16.68■□□□□ 0.26
SRSF3-201ENST00000339436 NBPF15Q8N660 670 aa16.68■□□□□ 0.26
SRSF3-201ENST00000339436 SGIP1Q9BQI5 828 aa16.68■□□□□ 0.26
SRSF3-201ENST00000339436 ATF5Q9Y2D1 282 aaPredicted RBP16.68■□□□□ 0.26
SRSF3-201ENST00000339436 GOLGB1Q14789 3259 aaKnown RBP16.67■□□□□ 0.26
SRSF3-201ENST00000339436 MSL1Q68DK7 614 aa16.67■□□□□ 0.26
SRSF3-201ENST00000339436 AFDNP55196 1824 aaKnown RBP16.67■□□□□ 0.26
SRSF3-201ENST00000339436 DUSP27Q5VZP5 1158 aa16.66■□□□□ 0.26
SRSF3-201ENST00000339436 SPINK5Q9NQ38 1064 aaPredicted RBP16.66■□□□□ 0.26
SRSF3-201ENST00000339436 SRP68Q9UHB9 627 aaKnown RBP16.66■□□□□ 0.26
SRSF3-201ENST00000339436 ZNF330Q9Y3S2 320 aaPredicted RBP16.66■□□□□ 0.26
SRSF3-201ENST00000339436 ANKRD36CQ5JPF3 1778 aa16.66■□□□□ 0.26
SRSF3-201ENST00000339436 A0A087WZG4 1122 aa16.65■□□□□ 0.26
SRSF3-201ENST00000339436 GYS1P13807 737 aa16.65■□□□□ 0.26
SRSF3-201ENST00000339436 EIF2S2P20042 333 aaKnown RBP16.65■□□□□ 0.26
SRSF3-201ENST00000339436 NARFQ9UHQ1 456 aa16.65■□□□□ 0.26
SRSF3-201ENST00000339436 KIF13BQ9NQT8 1826 aa16.65■□□□□ 0.26
SRSF3-201ENST00000339436 HDGFL1Q5TGJ6 251 aa16.65■□□□□ 0.26
SRSF3-201ENST00000339436 C8orf58Q8NAV2 365 aa16.65■□□□□ 0.26
SRSF3-201ENST00000339436 MYH16Q9H6N6 1097 aa16.65■□□□□ 0.26
SRSF3-201ENST00000339436 NRXN2Q9P2S2 1712 aa16.64■□□□□ 0.25
SRSF3-201ENST00000339436 ZPR1O75312 459 aa16.64■□□□□ 0.25
SRSF3-201ENST00000339436 NPM2Q86SE8 214 aaKnown RBP16.64■□□□□ 0.25
SRSF3-201ENST00000339436 POTEDQ86YR6 584 aa16.64■□□□□ 0.25
SRSF3-201ENST00000339436 ARFGEF2Q9Y6D5 1785 aa16.64■□□□□ 0.25
SRSF3-201ENST00000339436 POLD1P28340 1107 aa16.63■□□□□ 0.25
SRSF3-201ENST00000339436 GOLGA2Q08379 1002 aa16.63■□□□□ 0.25
SRSF3-201ENST00000339436 PDIA6Q15084 440 aa16.63■□□□□ 0.25
SRSF3-201ENST00000339436 USPL1Q5W0Q7 1092 aa16.63■□□□□ 0.25
SRSF3-201ENST00000339436 LRP10Q7Z4F1 713 aa16.63■□□□□ 0.25
SRSF3-201ENST00000339436 TSPYL6Q8N831 410 aa16.63■□□□□ 0.25
SRSF3-201ENST00000339436 NECTIN2Q92692 538 aa16.63■□□□□ 0.25
SRSF3-201ENST00000339436 PROSER3Q2NL68 480 aa16.62■□□□□ 0.25
SRSF3-201ENST00000339436 DZIP3Q86Y13 1208 aaKnown RBP16.62■□□□□ 0.25
SRSF3-201ENST00000339436 TBC1D2BQ9UPU7 963 aa16.62■□□□□ 0.25
SRSF3-201ENST00000339436 E9PSI1 815 aa16.61■□□□□ 0.25
SRSF3-201ENST00000339436 ELL2O00472 640 aaPredicted RBP16.61■□□□□ 0.25
SRSF3-201ENST00000339436 CAMTA2O94983 1202 aa16.61■□□□□ 0.25
SRSF3-201ENST00000339436 MYL6BP14649 208 aa16.61■□□□□ 0.25
SRSF3-201ENST00000339436 HNRNPUQ00839 825 aaKnown RBP eCLIP16.61■□□□□ 0.25
SRSF3-201ENST00000339436 FKBP8Q14318 412 aa16.61■□□□□ 0.25
SRSF3-201ENST00000339436 NLGN1Q8N2Q7 840 aa16.61■□□□□ 0.25
SRSF3-201ENST00000339436 BCL2L12Q9HB09 334 aa16.61■□□□□ 0.25
SRSF3-201ENST00000339436 DDX21Q9NR30 783 aaKnown RBP eCLIP16.61■□□□□ 0.25
SRSF3-201ENST00000339436 CHPF2Q9P2E5 772 aa16.61■□□□□ 0.25
SRSF3-201ENST00000339436 ANXA1P04083 346 aa16.6■□□□□ 0.25
SRSF3-201ENST00000339436 TWISTNBQ3B726 338 aaPredicted RBP16.6■□□□□ 0.25
SRSF3-201ENST00000339436 MMP10P09238 476 aa16.6■□□□□ 0.25
SRSF3-201ENST00000339436 EXOSC9Q06265 439 aaKnown RBP16.6■□□□□ 0.25
SRSF3-201ENST00000339436 ARXQ96QS3 562 aa16.6■□□□□ 0.25
SRSF3-201ENST00000339436 DBF4Q9UBU7 674 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms