RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 CAMTA1Q9Y6Y1 1673 aa23■■□□□ 1.27
PSPC1-201ENST00000338910 TEFQ10587 303 aa23■■□□□ 1.27
PSPC1-201ENST00000338910 HDGFL1Q5TGJ6 251 aa23■■□□□ 1.27
PSPC1-201ENST00000338910 ATP10DQ9P241 1426 aa22.99■■□□□ 1.27
PSPC1-201ENST00000338910 KCNQ3O43525 872 aa22.99■■□□□ 1.27
PSPC1-201ENST00000338910 EIF2S2P20042 333 aaKnown RBP22.99■■□□□ 1.27
PSPC1-201ENST00000338910 HS1BP3Q53T59 392 aa22.99■■□□□ 1.27
PSPC1-201ENST00000338910 CSB-PGBD3P0DP91 1061 aa22.99■■□□□ 1.27
PSPC1-201ENST00000338910 APBB1O00213 710 aa22.98■■□□□ 1.27
PSPC1-201ENST00000338910 COL18A1P39060 1754 aa22.98■■□□□ 1.27
PSPC1-201ENST00000338910 LMO7Q8WWI1 1683 aa22.98■■□□□ 1.27
PSPC1-201ENST00000338910 EIF4A1P60842 406 aaKnown RBP22.98■■□□□ 1.27
PSPC1-201ENST00000338910 BTBD11A6QL63 1104 aa22.97■■□□□ 1.27
PSPC1-201ENST00000338910 SOS2Q07890 1332 aaPredicted RBP22.97■■□□□ 1.27
PSPC1-201ENST00000338910 RNMTO43148 476 aaKnown RBP22.97■■□□□ 1.27
PSPC1-201ENST00000338910 C16orf71Q8IYS4 520 aaPredicted RBP22.97■■□□□ 1.27
PSPC1-201ENST00000338910 RAPGEF4Q8WZA2 1011 aa22.97■■□□□ 1.27
PSPC1-201ENST00000338910 PHAXQ9H814 394 aaKnown RBP22.97■■□□□ 1.27
PSPC1-201ENST00000338910 SOS1Q07889 1333 aaPredicted RBP22.96■■□□□ 1.27
PSPC1-201ENST00000338910 CRYBG1Q9Y4K1 1723 aa22.96■■□□□ 1.27
PSPC1-201ENST00000338910 AK9Q5TCS8 1911 aa22.96■■□□□ 1.27
PSPC1-201ENST00000338910 PDLIM2Q96JY6 352 aa22.94■■□□□ 1.26
PSPC1-201ENST00000338910 NOL7Q9UMY1 257 aaKnown RBP22.94■■□□□ 1.26
PSPC1-201ENST00000338910 ZSCAN23Q3MJ62 389 aa22.93■■□□□ 1.26
PSPC1-201ENST00000338910 CPDO75976 1380 aa22.93■■□□□ 1.26
PSPC1-201ENST00000338910 SMARCA5O60264 1052 aaPredicted RBP22.93■■□□□ 1.26
PSPC1-201ENST00000338910 ZNF500O60304 480 aaPredicted RBP22.93■■□□□ 1.26
PSPC1-201ENST00000338910 CYP2E1P05181 493 aaPredicted RBP22.93■■□□□ 1.26
PSPC1-201ENST00000338910 PLEKHM2Q8IWE5 1019 aa22.93■■□□□ 1.26
PSPC1-201ENST00000338910 CDC45O75419 566 aa22.92■■□□□ 1.26
PSPC1-201ENST00000338910 GNAI2P04899 355 aa22.92■■□□□ 1.26
PSPC1-201ENST00000338910 LMBRD1Q9NUN5 540 aa22.92■■□□□ 1.26
PSPC1-201ENST00000338910 MCTP1Q6DN14 999 aa22.92■■□□□ 1.26
PSPC1-201ENST00000338910 TATP17735 454 aaPredicted RBP22.91■■□□□ 1.26
PSPC1-201ENST00000338910 NUCB2P80303 420 aa22.91■■□□□ 1.26
PSPC1-201ENST00000338910 CAVIN1Q6NZI2 390 aaKnown RBP22.91■■□□□ 1.26
PSPC1-201ENST00000338910 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.91■■□□□ 1.26
PSPC1-201ENST00000338910 RABEP1Q15276 862 aa22.91■■□□□ 1.26
PSPC1-201ENST00000338910 OTUD7AQ8TE49 926 aaPredicted RBP22.91■■□□□ 1.26
PSPC1-201ENST00000338910 CHPF2Q9P2E5 772 aa22.91■■□□□ 1.26
PSPC1-201ENST00000338910 FAM208AQ9UK61 1670 aaKnown RBP22.9■■□□□ 1.26
PSPC1-201ENST00000338910 HMMRO75330 724 aa22.9■■□□□ 1.26
PSPC1-201ENST00000338910 RBSNQ9H1K0 784 aa22.9■■□□□ 1.26
PSPC1-201ENST00000338910 PRDM11Q9NQV5 511 aa22.9■■□□□ 1.26
PSPC1-201ENST00000338910 MEGF6O75095 1541 aa22.9■■□□□ 1.26
PSPC1-201ENST00000338910 KDM3BQ7LBC6 1761 aa22.89■■□□□ 1.26
PSPC1-201ENST00000338910 ANXA1P04083 346 aa22.89■■□□□ 1.26
PSPC1-201ENST00000338910 RBM10P98175 930 aaKnown RBP22.89■■□□□ 1.26
PSPC1-201ENST00000338910 R3HCC1Q9Y3T6 440 aaKnown RBP22.89■■□□□ 1.26
PSPC1-201ENST00000338910 GNAI3P08754 354 aa22.89■■□□□ 1.25
PSPC1-201ENST00000338910 MAP7D2Q96T17 732 aa22.89■■□□□ 1.25
PSPC1-201ENST00000338910 GSPT1P15170 499 aaKnown RBP22.88■■□□□ 1.25
PSPC1-201ENST00000338910 SPG7Q9UQ90 795 aa22.87■■□□□ 1.25
PSPC1-201ENST00000338910 ABCC6O95255 1503 aa22.87■■□□□ 1.25
PSPC1-201ENST00000338910 HOXB7P09629 217 aa22.87■■□□□ 1.25
PSPC1-201ENST00000338910 USP44Q9H0E7 712 aa22.87■■□□□ 1.25
PSPC1-201ENST00000338910 OVOS2A0A0G2JMS6 1433 aa22.86■■□□□ 1.25
PSPC1-201ENST00000338910 NCLP19338 710 aaKnown RBP22.86■■□□□ 1.25
PSPC1-201ENST00000338910 CACNA1FO60840 1977 aa22.86■■□□□ 1.25
PSPC1-201ENST00000338910 PHKG2P15735 406 aa22.86■■□□□ 1.25
PSPC1-201ENST00000338910 PRIM1P49642 420 aaKnown RBP22.86■■□□□ 1.25
PSPC1-201ENST00000338910 EXOC6BQ9Y2D4 811 aa22.86■■□□□ 1.25
PSPC1-201ENST00000338910 PNMA6EA0A0J9YXQ4 647 aa22.85■■□□□ 1.25
PSPC1-201ENST00000338910 PKP1Q13835 747 aa22.85■■□□□ 1.25
PSPC1-201ENST00000338910 LRRFIP2Q9Y608 721 aaKnown RBP22.85■■□□□ 1.25
PSPC1-201ENST00000338910 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.84■■□□□ 1.256e-7■■■■□ 19.6
PSPC1-201ENST00000338910 PRAMEF22A3QJZ6 481 aa22.84■■□□□ 1.25
PSPC1-201ENST00000338910 TTC22Q5TAA0 569 aa22.84■■□□□ 1.25
PSPC1-201ENST00000338910 PODXL2Q9NZ53 605 aa22.84■■□□□ 1.25
PSPC1-201ENST00000338910 ZKSCAN5Q9Y2L8 839 aa22.84■■□□□ 1.25
PSPC1-201ENST00000338910 PI4KAP2A4QPH2 592 aa22.83■■□□□ 1.25
PSPC1-201ENST00000338910 PI4KAP1Q8N8J0 262 aa22.83■■□□□ 1.25
PSPC1-201ENST00000338910 FAM13BQ9NYF5 915 aa22.83■■□□□ 1.25
PSPC1-201ENST00000338910 GIGYF1O75420 1035 aaPredicted RBP22.83■■□□□ 1.25
PSPC1-201ENST00000338910 ATP8B2P98198 1209 aa22.83■■□□□ 1.25
PSPC1-201ENST00000338910 IFNL2Q8IZJ0 200 aa22.83■■□□□ 1.25
PSPC1-201ENST00000338910 CHMP4AQ9BY43 222 aa22.83■■□□□ 1.25
PSPC1-201ENST00000338910 CYP27B1O15528 508 aa22.82■■□□□ 1.24
PSPC1-201ENST00000338910 UBTFL1P0CB47 393 aaPredicted RBP22.82■■□□□ 1.24
PSPC1-201ENST00000338910 GPT2Q8TD30 523 aa22.82■■□□□ 1.24
PSPC1-201ENST00000338910 SRCIN1Q9C0H9 1055 aa22.82■■□□□ 1.24
PSPC1-201ENST00000338910 CWC22Q9HCG8 908 aaKnown RBP22.82■■□□□ 1.24
PSPC1-201ENST00000338910 KDM6AO15550 1401 aaPredicted RBP22.82■■□□□ 1.24
PSPC1-201ENST00000338910 TOM1L2Q6ZVM7 507 aa22.82■■□□□ 1.24
PSPC1-201ENST00000338910 USP26Q9BXU7 913 aa22.82■■□□□ 1.24
PSPC1-201ENST00000338910 WDR17Q8IZU2 1322 aa22.82■■□□□ 1.24
PSPC1-201ENST00000338910 UQCRHLA0A096LP55 91 aa22.81■■□□□ 1.24
PSPC1-201ENST00000338910 UQCRHP07919 91 aa22.81■■□□□ 1.24
PSPC1-201ENST00000338910 MCM5P33992 734 aa22.81■■□□□ 1.24
PSPC1-201ENST00000338910 NFATC2IPQ8NCF5 419 aa22.81■■□□□ 1.24
PSPC1-201ENST00000338910 ADAMTS7Q9UKP4 1686 aa22.81■■□□□ 1.24
PSPC1-201ENST00000338910 SLC52A2Q9HAB3 445 aa22.81■■□□□ 1.24
PSPC1-201ENST00000338910 DBF4Q9UBU7 674 aaPredicted RBP22.81■■□□□ 1.24
PSPC1-201ENST00000338910 SLC39A6Q13433 755 aa22.8■■□□□ 1.24
PSPC1-201ENST00000338910 DNAAF4Q8WXU2 420 aa22.8■■□□□ 1.24
PSPC1-201ENST00000338910 PRDM4Q9UKN5 801 aa22.8■■□□□ 1.24
PSPC1-201ENST00000338910 SIPA1L3O60292 1781 aaPredicted RBP22.8■■□□□ 1.24
PSPC1-201ENST00000338910 PRPF40AO75400 957 aaKnown RBP22.79■■□□□ 1.24
PSPC1-201ENST00000338910 CSPP1Q1MSJ5 1256 aa22.79■■□□□ 1.24
PSPC1-201ENST00000338910 PROSER3Q2NL68 480 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms