RNA–Protein interactions for RNA: ENST00000338745.10

SATB1-201, Transcript of SATB homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SATB1, Length 7,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-201ENST00000338745 SNW1Q13573 536 aaKnown RBP19.36■□□□□ 0.69
SATB1-201ENST00000338745 SRRTQ9BXP5 876 aaKnown RBP19.36■□□□□ 0.69
SATB1-201ENST00000338745 STX1AQ16623 288 aa19.36■□□□□ 0.69
SATB1-201ENST00000338745 FSIP1Q8NA03 581 aa19.36■□□□□ 0.69
SATB1-201ENST00000338745 IGHMBP2P38935 993 aaKnown RBP19.36■□□□□ 0.69
SATB1-201ENST00000338745 RPAP2Q8IXW5 612 aaPredicted RBP19.36■□□□□ 0.69
SATB1-201ENST00000338745 TIAM1Q13009 1591 aa19.35■□□□□ 0.69
SATB1-201ENST00000338745 DUSP27Q5VZP5 1158 aa19.35■□□□□ 0.69
SATB1-201ENST00000338745 TDRD12Q587J7 1177 aaKnown RBP19.35■□□□□ 0.69
SATB1-201ENST00000338745 MYD88Q99836 296 aa19.35■□□□□ 0.69
SATB1-201ENST00000338745 USO1O60763 962 aaKnown RBP19.35■□□□□ 0.69
SATB1-201ENST00000338745 POLA1P09884 1462 aaPredicted RBP19.35■□□□□ 0.69
SATB1-201ENST00000338745 PLEKHH2Q8IVE3 1493 aa19.35■□□□□ 0.69
SATB1-201ENST00000338745 HLTFQ14527 1009 aaKnown RBP eCLIP19.34■□□□□ 0.69
SATB1-201ENST00000338745 ZSCAN23Q3MJ62 389 aa19.34■□□□□ 0.69
SATB1-201ENST00000338745 LARP1Q6PKG0 1096 aaKnown RBP19.34■□□□□ 0.69
SATB1-201ENST00000338745 ZNF830Q96NB3 372 aaPredicted RBP19.34■□□□□ 0.69
SATB1-201ENST00000338745 SCAND2PQ9GZW5 306 aaPredicted RBP19.34■□□□□ 0.69
SATB1-201ENST00000338745 PDIA4P13667 645 aaKnown RBP19.34■□□□□ 0.69
SATB1-201ENST00000338745 LIG1P18858 919 aa19.34■□□□□ 0.69
SATB1-201ENST00000338745 ZNF692Q9BU19 519 aaPredicted RBP19.34■□□□□ 0.69
SATB1-201ENST00000338745 NUTM2BA6NNL0 878 aaPredicted RBP19.34■□□□□ 0.69
SATB1-201ENST00000338745 NUTM2EB1AL46 878 aaPredicted RBP19.34■□□□□ 0.69
SATB1-201ENST00000338745 CTAGE5O15320 804 aa19.34■□□□□ 0.69
SATB1-201ENST00000338745 YEATS4O95619 227 aa19.34■□□□□ 0.69
SATB1-201ENST00000338745 STAMBPO95630 424 aa19.34■□□□□ 0.69
SATB1-201ENST00000338745 POLR3DP05423 398 aaPredicted RBP19.34■□□□□ 0.69
SATB1-201ENST00000338745 NUTM2AQ8IVF1 878 aaPredicted RBP19.34■□□□□ 0.69
SATB1-201ENST00000338745 CETN2P41208 172 aa19.34■□□□□ 0.69
SATB1-201ENST00000338745 SLC12A7Q9Y666 1083 aa19.34■□□□□ 0.69
SATB1-201ENST00000338745 MAATS1Q7Z4T9 603 aa19.34■□□□□ 0.69
SATB1-201ENST00000338745 AFAP1Q8N556 730 aa19.33■□□□□ 0.69
SATB1-201ENST00000338745 SH2B1Q9NRF2 756 aaPredicted RBP19.33■□□□□ 0.69
SATB1-201ENST00000338745 PAFAH1B1P43034 410 aa19.33■□□□□ 0.68
SATB1-201ENST00000338745 CCDC8Q9H0W5 538 aaPredicted RBP19.33■□□□□ 0.68
SATB1-201ENST00000338745 MACROD2A1Z1Q3 448 aa19.33■□□□□ 0.68
SATB1-201ENST00000338745 MKNK2Q9HBH9 465 aa19.32■□□□□ 0.68
SATB1-201ENST00000338745 TFIP11Q9UBB9 837 aaKnown RBP19.32■□□□□ 0.68
SATB1-201ENST00000338745 FGFR1OPO95684 399 aaKnown RBP19.32■□□□□ 0.68
SATB1-201ENST00000338745 ZSWIM4Q9H7M6 989 aa19.32■□□□□ 0.68
SATB1-201ENST00000338745 GLRX3O76003 335 aaKnown RBP19.32■□□□□ 0.68
SATB1-201ENST00000338745 GOLGA8BA8MQT2 603 aa19.32■□□□□ 0.68
SATB1-201ENST00000338745 CHMP4BP1P59074 171 aa19.32■□□□□ 0.68
SATB1-201ENST00000338745 PRPF4BQ13523 1007 aaKnown RBP19.32■□□□□ 0.68
SATB1-201ENST00000338745 AQRO60306 1485 aaKnown RBP eCLIP19.32■□□□□ 0.68
SATB1-201ENST00000338745 IFIT1P09914 478 aaKnown RBP19.31■□□□□ 0.68
SATB1-201ENST00000338745 VPS36Q86VN1 386 aa19.31■□□□□ 0.68
SATB1-201ENST00000338745 SMARCC1Q92922 1105 aaPredicted RBP19.31■□□□□ 0.68
SATB1-201ENST00000338745 ALS2CR12Q96Q35 445 aa19.31■□□□□ 0.68
SATB1-201ENST00000338745 HFM1A2PYH4 1435 aa19.31■□□□□ 0.68
SATB1-201ENST00000338745 TMCO5BA8MYB1 307 aa19.31■□□□□ 0.68
SATB1-201ENST00000338745 FCHSD2O94868 740 aa19.31■□□□□ 0.68
SATB1-201ENST00000338745 NAPBQ9H115 298 aa19.31■□□□□ 0.68
SATB1-201ENST00000338745 TNIP1Q15025 636 aa19.31■□□□□ 0.68
SATB1-201ENST00000338745 SYNJ1O43426 1573 aa19.31■□□□□ 0.68
SATB1-201ENST00000338745 LIMCH1Q9UPQ0 1083 aa19.31■□□□□ 0.68
SATB1-201ENST00000338745 AKAP2Q9Y2D5 859 aa19.31■□□□□ 0.68
SATB1-201ENST00000338745 POTEB2H3BUK9 544 aa19.31■□□□□ 0.68
SATB1-201ENST00000338745 ZNF213O14771 459 aa19.31■□□□□ 0.68
SATB1-201ENST00000338745 TRIM21P19474 475 aaKnown RBP19.31■□□□□ 0.68
SATB1-201ENST00000338745 GSDMDP57764 484 aa19.31■□□□□ 0.68
SATB1-201ENST00000338745 RANBP6O60518 1105 aaKnown RBP19.3■□□□□ 0.68
SATB1-201ENST00000338745 RARSP54136 660 aaKnown RBP19.3■□□□□ 0.68
SATB1-201ENST00000338745 JADE2Q9NQC1 790 aa19.3■□□□□ 0.68
SATB1-201ENST00000338745 PTPN23Q9H3S7 1636 aa19.3■□□□□ 0.68
SATB1-201ENST00000338745 NLRP5P59047 1200 aa19.3■□□□□ 0.68
SATB1-201ENST00000338745 SMC1AQ14683 1233 aaKnown RBP19.3■□□□□ 0.68
SATB1-201ENST00000338745 SYNJ2O15056 1496 aa19.3■□□□□ 0.68
SATB1-201ENST00000338745 SPECC1Q5M775 1068 aa19.3■□□□□ 0.68
SATB1-201ENST00000338745 PROSER2Q86WR7 435 aaPredicted RBP19.3■□□□□ 0.68
SATB1-201ENST00000338745 CCDC175P0C221 793 aa19.3■□□□□ 0.68
SATB1-201ENST00000338745 MTIF2P46199 727 aaKnown RBP19.3■□□□□ 0.68
SATB1-201ENST00000338745 FAM107BQ9H098 131 aa19.3■□□□□ 0.68
SATB1-201ENST00000338745 F6X3S4 739 aa19.29■□□□□ 0.68
SATB1-201ENST00000338745 SLC4A8Q2Y0W8 1093 aa19.29■□□□□ 0.68
SATB1-201ENST00000338745 SERPINA10Q9UK55 444 aa19.29■□□□□ 0.68
SATB1-201ENST00000338745 HSF2BPO75031 334 aa19.29■□□□□ 0.68
SATB1-201ENST00000338745 PPFIA3O75145 1194 aa19.29■□□□□ 0.68
SATB1-201ENST00000338745 ATP2C2O75185 946 aa19.29■□□□□ 0.68
SATB1-201ENST00000338745 TBC1D9Q6ZT07 1266 aa19.29■□□□□ 0.68
SATB1-201ENST00000338745 PHAXQ9H814 394 aaKnown RBP19.29■□□□□ 0.68
SATB1-201ENST00000338745 SSH1Q8WYL5 1049 aa19.29■□□□□ 0.68
SATB1-201ENST00000338745 CCDC150Q8NCX0 1101 aa19.28■□□□□ 0.68
SATB1-201ENST00000338745 ZBTB9Q96C00 473 aa19.28■□□□□ 0.68
SATB1-201ENST00000338745 DAPK1P53355 1430 aa19.28■□□□□ 0.68
SATB1-201ENST00000338745 HMGB1P09429 215 aaKnown RBP19.28■□□□□ 0.68
SATB1-201ENST00000338745 STX6O43752 255 aa19.28■□□□□ 0.68
SATB1-201ENST00000338745 GOLGA8AA7E2F4 631 aa19.28■□□□□ 0.68
SATB1-201ENST00000338745 SPTY2D1Q68D10 685 aaPredicted RBP19.28■□□□□ 0.68
SATB1-201ENST00000338745 DYNC1I1O14576 645 aa19.28■□□□□ 0.68
SATB1-201ENST00000338745 NOP2P46087 812 aaKnown RBP19.28■□□□□ 0.68
SATB1-201ENST00000338745 GIGYF2Q6Y7W6 1299 aaKnown RBP19.28■□□□□ 0.68
SATB1-201ENST00000338745 CTNNA2P26232 953 aa19.27■□□□□ 0.68
SATB1-201ENST00000338745 GIMAP6Q6P9H5 292 aa19.27■□□□□ 0.68
SATB1-201ENST00000338745 NAA15Q9BXJ9 866 aaKnown RBP19.27■□□□□ 0.68
SATB1-201ENST00000338745 FAM135AQ9P2D6 1515 aa19.27■□□□□ 0.68
SATB1-201ENST00000338745 NEMFO60524 1076 aa19.27■□□□□ 0.68
SATB1-201ENST00000338745 TMEM266Q2M3C6 531 aa19.27■□□□□ 0.68
SATB1-201ENST00000338745 CCDC96Q2M329 555 aa19.27■□□□□ 0.67
SATB1-201ENST00000338745 TSHZ3Q63HK5 1081 aa19.27■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms