RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 RASSF8Q8NHQ8 419 aa7.51□□□□□ -1.21
PRKDC-202ENST00000338368 TEX13AQ9BXU3 409 aaPredicted RBP7.51□□□□□ -1.21
PRKDC-202ENST00000338368 SSFA2P28290 1259 aa7.5□□□□□ -1.21
PRKDC-202ENST00000338368 ADGBQ8N7X0 1667 aa7.5□□□□□ -1.21
PRKDC-202ENST00000338368 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.5□□□□□ -1.21
PRKDC-202ENST00000338368 IL17REQ8NFR9 667 aa7.5□□□□□ -1.21
PRKDC-202ENST00000338368 DCAF5Q96JK2 942 aa7.5□□□□□ -1.21
PRKDC-202ENST00000338368 DDX21Q9NR30 783 aaKnown RBP eCLIP7.5□□□□□ -1.21
PRKDC-202ENST00000338368 CCDC83Q8IWF9 413 aa7.5□□□□□ -1.21
PRKDC-202ENST00000338368 ESYT1Q9BSJ8 1104 aa7.5□□□□□ -1.21
PRKDC-202ENST00000338368 BRPF3Q9ULD4 1205 aa7.5□□□□□ -1.21
PRKDC-202ENST00000338368 NASPP49321 788 aaPredicted RBP7.5□□□□□ -1.21
PRKDC-202ENST00000338368 LMBR1LQ6UX01 489 aa7.5□□□□□ -1.21
PRKDC-202ENST00000338368 TNPO1Q92973 898 aaKnown RBP7.5□□□□□ -1.21
PRKDC-202ENST00000338368 CASTP20810 708 aaKnown RBP7.5□□□□□ -1.21
PRKDC-202ENST00000338368 MEX3CQ5U5Q3 659 aaKnown RBP7.5□□□□□ -1.21
PRKDC-202ENST00000338368 ZSCAN25Q6NSZ9 544 aa7.5□□□□□ -1.21
PRKDC-202ENST00000338368 MPHOSPH8Q99549 860 aa7.5□□□□□ -1.21
PRKDC-202ENST00000338368 PA2G4Q9UQ80 394 aaKnown RBP7.5□□□□□ -1.21
PRKDC-202ENST00000338368 LETM1O95202 739 aaPredicted RBP7.5□□□□□ -1.21
PRKDC-202ENST00000338368 ADAMTS2O95450 1211 aa7.5□□□□□ -1.21
PRKDC-202ENST00000338368 TRMT112Q9UI30 125 aaKnown RBP7.5□□□□□ -1.21
PRKDC-202ENST00000338368 KIAA0232Q92628 1395 aa7.5□□□□□ -1.21
PRKDC-202ENST00000338368 USP19O94966 1318 aa7.49□□□□□ -1.21
PRKDC-202ENST00000338368 PHF23Q9BUL5 403 aaPredicted RBP7.49□□□□□ -1.21
PRKDC-202ENST00000338368 IDH1O75874 414 aaKnown RBP7.49□□□□□ -1.21
PRKDC-202ENST00000338368 CCDC73Q6ZRK6 1079 aa7.49□□□□□ -1.21
PRKDC-202ENST00000338368 NOL10Q9BSC4 688 aaKnown RBP7.49□□□□□ -1.21
PRKDC-202ENST00000338368 KRT85P78386 507 aa7.49□□□□□ -1.21
PRKDC-202ENST00000338368 FAM135BQ49AJ0 1406 aa7.49□□□□□ -1.21
PRKDC-202ENST00000338368 ZNF790Q6PG37 636 aa7.49□□□□□ -1.21
PRKDC-202ENST00000338368 LDHAL6AQ6ZMR3 332 aa7.49□□□□□ -1.21
PRKDC-202ENST00000338368 SNX21Q969T3 373 aa7.49□□□□□ -1.21
PRKDC-202ENST00000338368 EFCAB6Q5THR3 1501 aa7.49□□□□□ -1.21
PRKDC-202ENST00000338368 HOXB7P09629 217 aa7.49□□□□□ -1.21
PRKDC-202ENST00000338368 EIF4A1P60842 406 aaKnown RBP7.49□□□□□ -1.21
PRKDC-202ENST00000338368 METTL24Q5JXM2 366 aa7.49□□□□□ -1.21
PRKDC-202ENST00000338368 TMX3Q96JJ7 454 aa7.49□□□□□ -1.21
PRKDC-202ENST00000338368 GPTP24298 496 aa7.49□□□□□ -1.21
PRKDC-202ENST00000338368 BRPF1P55201 1214 aaPredicted RBP7.49□□□□□ -1.21
PRKDC-202ENST00000338368 IFIT5Q13325 482 aaKnown RBP7.49□□□□□ -1.21
PRKDC-202ENST00000338368 ZNF853P0CG23 659 aa7.49□□□□□ -1.21
PRKDC-202ENST00000338368 PIP4K2BP78356 416 aa7.48□□□□□ -1.21
PRKDC-202ENST00000338368 OTUD7AQ8TE49 926 aaPredicted RBP7.48□□□□□ -1.21
PRKDC-202ENST00000338368 GRPEL1Q9HAV7 217 aa7.48□□□□□ -1.21
PRKDC-202ENST00000338368 IL27Q8NEV9 243 aa7.48□□□□□ -1.21
PRKDC-202ENST00000338368 CLASP1Q7Z460 1538 aa7.48□□□□□ -1.21
PRKDC-202ENST00000338368 SDF4Q9BRK5 362 aa7.48□□□□□ -1.21
PRKDC-202ENST00000338368 LARP6Q9BRS8 491 aaKnown RBP7.48□□□□□ -1.21
PRKDC-202ENST00000338368 CWC25Q9NXE8 425 aaPredicted RBP7.48□□□□□ -1.21
PRKDC-202ENST00000338368 CTNNA3Q9UI47 895 aa7.48□□□□□ -1.21
PRKDC-202ENST00000338368 TULP1O00294 542 aaPredicted RBP7.48□□□□□ -1.21
PRKDC-202ENST00000338368 ABCC4O15439 1325 aa7.48□□□□□ -1.21
PRKDC-202ENST00000338368 SAFBQ15424 915 aaKnown RBP eCLIP7.48□□□□□ -1.21
PRKDC-202ENST00000338368 DHX16O60231 1041 aaKnown RBP7.48□□□□□ -1.21
PRKDC-202ENST00000338368 FERMT3Q86UX7 667 aa7.48□□□□□ -1.21
PRKDC-202ENST00000338368 NBPF7P0C2Y1 421 aaPredicted RBP7.48□□□□□ -1.21
PRKDC-202ENST00000338368 ANAPC15P60006 121 aa7.48□□□□□ -1.21
PRKDC-202ENST00000338368 LIMCH1Q9UPQ0 1083 aa7.48□□□□□ -1.21
PRKDC-202ENST00000338368 PDIA4P13667 645 aaKnown RBP7.48□□□□□ -1.21
PRKDC-202ENST00000338368 RBM25P49756 843 aaKnown RBP7.48□□□□□ -1.21
PRKDC-202ENST00000338368 HSP90AB3PQ58FF7 597 aa7.48□□□□□ -1.21
PRKDC-202ENST00000338368 A2ML1A8K2U0 1454 aa7.47□□□□□ -1.21
PRKDC-202ENST00000338368 RRP12Q5JTH9 1297 aaKnown RBP7.47□□□□□ -1.21
PRKDC-202ENST00000338368 IQGAP3Q86VI3 1631 aa7.47□□□□□ -1.21
PRKDC-202ENST00000338368 PNMA6EA0A0J9YXQ4 647 aa7.47□□□□□ -1.21
PRKDC-202ENST00000338368 NACAP1Q9BZK3 213 aa7.47□□□□□ -1.21
PRKDC-202ENST00000338368 GOLIM4O00461 696 aa7.47□□□□□ -1.21
PRKDC-202ENST00000338368 KDM4AO75164 1064 aa7.47□□□□□ -1.21
PRKDC-202ENST00000338368 CEBPZQ03701 1054 aaKnown RBP7.47□□□□□ -1.21
PRKDC-202ENST00000338368 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.47□□□□□ -1.21
PRKDC-202ENST00000338368 ATP7BP35670 1465 aa7.47□□□□□ -1.21
PRKDC-202ENST00000338368 SYNMO15061 1565 aa7.47□□□□□ -1.21
PRKDC-202ENST00000338368 SART3Q15020 963 aaKnown RBP7.47□□□□□ -1.21
PRKDC-202ENST00000338368 TSPY26PQ9H489 355 aa7.47□□□□□ -1.21
PRKDC-202ENST00000338368 MYO5CQ9NQX4 1742 aa7.47□□□□□ -1.21
PRKDC-202ENST00000338368 CHMLP26374 656 aa7.47□□□□□ -1.21
PRKDC-202ENST00000338368 IGSF1Q8N6C5 1336 aa7.47□□□□□ -1.21
PRKDC-202ENST00000338368 BICDL1Q6ZP65 573 aa7.47□□□□□ -1.21
PRKDC-202ENST00000338368 SNRKQ9NRH2 765 aa7.47□□□□□ -1.21
PRKDC-202ENST00000338368 ABCF2Q9UG63 623 aa7.46□□□□□ -1.21
PRKDC-202ENST00000338368 U3KPZ7 1027 aaPredicted RBP7.46□□□□□ -1.21
PRKDC-202ENST00000338368 UNC13BO14795 1591 aa7.46□□□□□ -1.21
PRKDC-202ENST00000338368 BAG4O95429 457 aaKnown RBP7.46□□□□□ -1.21
PRKDC-202ENST00000338368 ARHGEF10O15013 1369 aa7.46□□□□□ -1.22
PRKDC-202ENST00000338368 ANKRD18BA2A2Z9 1011 aa7.46□□□□□ -1.22
PRKDC-202ENST00000338368 USP6P35125 1406 aa7.46□□□□□ -1.22
PRKDC-202ENST00000338368 DDX46Q7L014 1031 aaKnown RBP7.46□□□□□ -1.22
PRKDC-202ENST00000338368 ARHGEF25Q86VW2 580 aa7.46□□□□□ -1.22
PRKDC-202ENST00000338368 STK11IPQ8N1F8 1099 aa7.46□□□□□ -1.22
PRKDC-202ENST00000338368 TTC41PQ6P2S7 1318 aa7.46□□□□□ -1.22
PRKDC-202ENST00000338368 KCNQ3O43525 872 aa7.46□□□□□ -1.22
PRKDC-202ENST00000338368 XBP1P17861 261 aa7.46□□□□□ -1.22
PRKDC-202ENST00000338368 CCDC173Q0VFZ6 552 aa7.46□□□□□ -1.22
PRKDC-202ENST00000338368 IGHMBP2P38935 993 aaKnown RBP7.46□□□□□ -1.22
PRKDC-202ENST00000338368 FAM43AQ8N2R8 423 aa7.46□□□□□ -1.22
PRKDC-202ENST00000338368 ZNF496Q96IT1 587 aaPredicted RBP7.46□□□□□ -1.22
PRKDC-202ENST00000338368 STK38Q15208 465 aa7.46□□□□□ -1.22
PRKDC-202ENST00000338368 USP26Q9BXU7 913 aa7.46□□□□□ -1.22
PRKDC-202ENST00000338368 USP44Q9H0E7 712 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms