RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 ADGRL1O94910 1474 aa16.06■□□□□ 0.16
RTN4-202ENST00000337526 CTAGE5O15320 804 aa16.06■□□□□ 0.16
RTN4-202ENST00000337526 ADCY5O95622 1261 aa16.06■□□□□ 0.16
RTN4-202ENST00000337526 GPATCH8Q9UKJ3 1502 aaKnown RBP16.06■□□□□ 0.16
RTN4-202ENST00000337526 FAM135AQ9P2D6 1515 aa16.06■□□□□ 0.16
RTN4-202ENST00000337526 PI4KAP2A4QPH2 592 aa16.06■□□□□ 0.16
RTN4-202ENST00000337526 PI4KAP1Q8N8J0 262 aa16.06■□□□□ 0.16
RTN4-202ENST00000337526 RALGAPBQ86X10 1494 aa16.06■□□□□ 0.16
RTN4-202ENST00000337526 UBE2HP62256 183 aa16.05■□□□□ 0.16
RTN4-202ENST00000337526 ZSCAN23Q3MJ62 389 aa16.05■□□□□ 0.16
RTN4-202ENST00000337526 TMCO3Q6UWJ1 677 aa16.05■□□□□ 0.16
RTN4-202ENST00000337526 PDCL3Q9H2J4 239 aa16.05■□□□□ 0.16
RTN4-202ENST00000337526 HYPKQ9NX55 129 aa16.05■□□□□ 0.16
RTN4-202ENST00000337526 TNNT1P13805 278 aa16.05■□□□□ 0.16
RTN4-202ENST00000337526 ZNF165P49910 485 aa16.05■□□□□ 0.16
RTN4-202ENST00000337526 PIBF1Q8WXW3 757 aa16.05■□□□□ 0.16
RTN4-202ENST00000337526 CEP131Q9UPN4 1083 aa16.05■□□□□ 0.16
RTN4-202ENST00000337526 EIF4G3O43432 1585 aaKnown RBP16.05■□□□□ 0.16
RTN4-202ENST00000337526 ANKRD36BQ8N2N9 1353 aa16.05■□□□□ 0.16
RTN4-202ENST00000337526 C16orf45Q96MC5 204 aaPredicted RBP16.05■□□□□ 0.16
RTN4-202ENST00000337526 A0A087WZG4 1122 aa16.05■□□□□ 0.16
RTN4-202ENST00000337526 RLBP1P12271 317 aa16.05■□□□□ 0.16
RTN4-202ENST00000337526 EIF5P55010 431 aaKnown RBP16.05■□□□□ 0.16
RTN4-202ENST00000337526 TESK2Q96S53 571 aa16.05■□□□□ 0.16
RTN4-202ENST00000337526 TTC21BQ7Z4L5 1316 aa16.04■□□□□ 0.16
RTN4-202ENST00000337526 ZSCAN12O43309 604 aa16.04■□□□□ 0.16
RTN4-202ENST00000337526 HCLS1P14317 486 aaPredicted RBP16.04■□□□□ 0.16
RTN4-202ENST00000337526 CCT2P78371 535 aaKnown RBP16.04■□□□□ 0.16
RTN4-202ENST00000337526 PANK2Q9BZ23 570 aa16.04■□□□□ 0.16
RTN4-202ENST00000337526 TNNQ9UQP3 1299 aa16.04■□□□□ 0.16
RTN4-202ENST00000337526 URI1O94763 535 aaPredicted RBP16.04■□□□□ 0.16
RTN4-202ENST00000337526 STARD3NLO95772 234 aa16.04■□□□□ 0.16
RTN4-202ENST00000337526 SSBP05455 408 aaKnown RBP eCLIP16.04■□□□□ 0.16
RTN4-202ENST00000337526 CBX1P83916 185 aa16.04■□□□□ 0.16
RTN4-202ENST00000337526 SYCP1Q15431 976 aa16.04■□□□□ 0.16
RTN4-202ENST00000337526 BMP2KQ9NSY1 1161 aaPredicted RBP16.04■□□□□ 0.16
RTN4-202ENST00000337526 TXLNBQ8N3L3 684 aa16.04■□□□□ 0.16
RTN4-202ENST00000337526 ANKRD44Q8N8A2 993 aa16.04■□□□□ 0.16
RTN4-202ENST00000337526 GOLGA6L10A6NI86 522 aa16.03■□□□□ 0.16
RTN4-202ENST00000337526 PDE1AP54750 535 aa16.03■□□□□ 0.16
RTN4-202ENST00000337526 MEX3CQ5U5Q3 659 aaKnown RBP16.03■□□□□ 0.16
RTN4-202ENST00000337526 KLHL10Q6JEL2 608 aa16.03■□□□□ 0.16
RTN4-202ENST00000337526 CCDC82Q8N4S0 544 aa16.03■□□□□ 0.16
RTN4-202ENST00000337526 FSIP1Q8NA03 581 aa16.03■□□□□ 0.16
RTN4-202ENST00000337526 AMOTL2Q9Y2J4 779 aa16.03■□□□□ 0.16
RTN4-202ENST00000337526 SNX21Q969T3 373 aa16.03■□□□□ 0.16
RTN4-202ENST00000337526 NAPBQ9H115 298 aa16.03■□□□□ 0.16
RTN4-202ENST00000337526 TRMT1Q9NXH9 659 aaKnown RBP16.03■□□□□ 0.16
RTN4-202ENST00000337526 TOP1P11387 765 aaKnown RBP16.03■□□□□ 0.16
RTN4-202ENST00000337526 IGHMBP2P38935 993 aaKnown RBP16.03■□□□□ 0.16
RTN4-202ENST00000337526 CCDC196A0A1B0GTZ2 297 aa16.03■□□□□ 0.16
RTN4-202ENST00000337526 ZNF213O14771 459 aa16.03■□□□□ 0.16
RTN4-202ENST00000337526 FOXO3O43524 673 aa16.03■□□□□ 0.16
RTN4-202ENST00000337526 RHPN1Q8TCX5 695 aa16.03■□□□□ 0.16
RTN4-202ENST00000337526 CCDC102AQ96A19 550 aa16.03■□□□□ 0.16
RTN4-202ENST00000337526 PHF8Q9UPP1 1060 aa16.03■□□□□ 0.16
RTN4-202ENST00000337526 THOC2Q8NI27 1593 aaKnown RBP16.03■□□□□ 0.16
RTN4-202ENST00000337526 CLCN1P35523 988 aa16.02■□□□□ 0.16
RTN4-202ENST00000337526 LRSAM1Q6UWE0 723 aa16.02■□□□□ 0.16
RTN4-202ENST00000337526 CCDC191Q8NCU4 936 aa16.02■□□□□ 0.16
RTN4-202ENST00000337526 MINDY4BA8MYZ0 360 aa16.02■□□□□ 0.15
RTN4-202ENST00000337526 ERLIN2O94905 339 aa16.02■□□□□ 0.15
RTN4-202ENST00000337526 UVSSAQ2YD98 709 aa16.02■□□□□ 0.15
RTN4-202ENST00000337526 MAP3K2Q9Y2U5 619 aa16.02■□□□□ 0.15
RTN4-202ENST00000337526 RDXP35241 583 aaKnown RBP16.02■□□□□ 0.15
RTN4-202ENST00000337526 ASXL1Q8IXJ9 1541 aa16.02■□□□□ 0.15
RTN4-202ENST00000337526 ERICH4A6NGS2 130 aa16.01■□□□□ 0.15
RTN4-202ENST00000337526 NEMFO60524 1076 aa16.01■□□□□ 0.15
RTN4-202ENST00000337526 IFIT5Q13325 482 aaKnown RBP16.01■□□□□ 0.15
RTN4-202ENST00000337526 C8orf58Q8NAV2 365 aa16.01■□□□□ 0.15
RTN4-202ENST00000337526 GIMAP6Q6P9H5 292 aa16.01■□□□□ 0.15
RTN4-202ENST00000337526 KIAA1328Q86T90 577 aa16.01■□□□□ 0.15
RTN4-202ENST00000337526 ANXA1P04083 346 aa16■□□□□ 0.15
RTN4-202ENST00000337526 PER1O15534 1290 aaPredicted RBP16■□□□□ 0.15
RTN4-202ENST00000337526 PRAG1Q86YV5 1406 aa16■□□□□ 0.15
RTN4-202ENST00000337526 POLR3AO14802 1390 aaPredicted RBP16■□□□□ 0.15
RTN4-202ENST00000337526 GOLGA8BA8MQT2 603 aa16■□□□□ 0.15
RTN4-202ENST00000337526 IQCEQ6IPM2 695 aa16■□□□□ 0.15
RTN4-202ENST00000337526 NEK1Q96PY6 1258 aa16■□□□□ 0.15
RTN4-202ENST00000337526 SEC24BO95487 1268 aa16■□□□□ 0.15
RTN4-202ENST00000337526 ZSCAN22P10073 491 aaPredicted RBP16■□□□□ 0.15
RTN4-202ENST00000337526 FAM193AP78312 1265 aa16■□□□□ 0.15
RTN4-202ENST00000337526 C16orf71Q8IYS4 520 aaPredicted RBP16■□□□□ 0.15
RTN4-202ENST00000337526 CENPHQ9H3R5 247 aa16■□□□□ 0.15
RTN4-202ENST00000337526 BIN1O00499 593 aa15.99■□□□□ 0.15
RTN4-202ENST00000337526 MRPL50Q8N5N7 158 aaKnown RBP15.99■□□□□ 0.15
RTN4-202ENST00000337526 PIK3R4Q99570 1358 aa15.99■□□□□ 0.15
RTN4-202ENST00000337526 GOLIM4O00461 696 aa15.99■□□□□ 0.15
RTN4-202ENST00000337526 SMC5Q8IY18 1101 aa15.99■□□□□ 0.15
RTN4-202ENST00000337526 CNNM3Q8NE01 707 aa15.99■□□□□ 0.15
RTN4-202ENST00000337526 PRDM10Q9NQV6 1147 aa15.99■□□□□ 0.15
RTN4-202ENST00000337526 KIAA0754O94854 1291 aa15.99■□□□□ 0.15
RTN4-202ENST00000337526 CAVIN2O95810 425 aa15.99■□□□□ 0.15
RTN4-202ENST00000337526 ANAPC15P60006 121 aa15.99■□□□□ 0.15
RTN4-202ENST00000337526 KIF4BQ2VIQ3 1234 aa15.99■□□□□ 0.15
RTN4-202ENST00000337526 ESYT1Q9BSJ8 1104 aa15.99■□□□□ 0.15
RTN4-202ENST00000337526 MAP3K12Q12852 859 aa15.98■□□□□ 0.15
RTN4-202ENST00000337526 ACEP12821 1306 aa15.98■□□□□ 0.15
RTN4-202ENST00000337526 GSDMDP57764 484 aa15.98■□□□□ 0.15
RTN4-202ENST00000337526 UBE3BQ7Z3V4 1068 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms