RNA–Protein interactions for RNA: ENST00000337138.8

HIF1A-202, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HIF1A, Length 3,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-202ENST00000337138 GPT2Q8TD30 523 aa12.32□□□□□ -0.44
HIF1A-202ENST00000337138 RPAP2Q8IXW5 612 aaPredicted RBP12.32□□□□□ -0.44
HIF1A-202ENST00000337138 ZHX1Q9UKY1 873 aaPredicted RBP12.32□□□□□ -0.44
HIF1A-202ENST00000337138 NUCB2P80303 420 aa12.31□□□□□ -0.44
HIF1A-202ENST00000337138 NUP188Q5SRE5 1749 aa12.31□□□□□ -0.44
HIF1A-202ENST00000337138 STAP2Q9UGK3 403 aa12.31□□□□□ -0.44
HIF1A-202ENST00000337138 CHMP3Q9Y3E7 222 aa12.31□□□□□ -0.44
HIF1A-202ENST00000337138 CUL4AQ13619 759 aa12.31□□□□□ -0.44
HIF1A-202ENST00000337138 MTHFSDQ2M296 383 aaKnown RBP12.31□□□□□ -0.44
HIF1A-202ENST00000337138 KLHL40Q2TBA0 621 aa12.31□□□□□ -0.44
HIF1A-202ENST00000337138 ZSCAN23Q3MJ62 389 aa12.31□□□□□ -0.44
HIF1A-202ENST00000337138 DDX54Q8TDD1 881 aaKnown RBP12.31□□□□□ -0.44
HIF1A-202ENST00000337138 UBR2Q8IWV8 1755 aa12.3□□□□□ -0.44
HIF1A-202ENST00000337138 PKD1L3Q7Z443 1732 aa12.3□□□□□ -0.44
HIF1A-202ENST00000337138 REC8O95072 547 aa12.3□□□□□ -0.44
HIF1A-202ENST00000337138 RBSNQ9H1K0 784 aa12.3□□□□□ -0.44
HIF1A-202ENST00000337138 TJP1Q07157 1748 aa12.3□□□□□ -0.44
HIF1A-202ENST00000337138 EIF2S2P20042 333 aaKnown RBP12.3□□□□□ -0.44
HIF1A-202ENST00000337138 CCDC173Q0VFZ6 552 aa12.3□□□□□ -0.44
HIF1A-202ENST00000337138 BCL11BQ9C0K0 894 aaPredicted RBP12.3□□□□□ -0.44
HIF1A-202ENST00000337138 NSFL1CQ9UNZ2 370 aaKnown RBP12.3□□□□□ -0.44
HIF1A-202ENST00000337138 SHANK3Q9BYB0 1731 aa12.3□□□□□ -0.44
HIF1A-202ENST00000337138 STK31Q9BXU1 1019 aa12.3□□□□□ -0.44
HIF1A-202ENST00000337138 PARP4Q9UKK3 1724 aaKnown RBP12.29□□□□□ -0.44
HIF1A-202ENST00000337138 PAPPAQ13219 1627 aa12.29□□□□□ -0.44
HIF1A-202ENST00000337138 HMMRO75330 724 aa12.29□□□□□ -0.44
HIF1A-202ENST00000337138 FLT4P35916 1363 aa12.29□□□□□ -0.44
HIF1A-202ENST00000337138 ABCC6O95255 1503 aa12.29□□□□□ -0.44
HIF1A-202ENST00000337138 OS9Q13438 667 aaPredicted RBP12.29□□□□□ -0.44
HIF1A-202ENST00000337138 PDCL3Q9H2J4 239 aa12.29□□□□□ -0.44
HIF1A-202ENST00000337138 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.28□□□□□ -0.44
HIF1A-202ENST00000337138 ZSCAN30Q86W11 494 aa12.28□□□□□ -0.44
HIF1A-202ENST00000337138 ERC2O15083 957 aa12.28□□□□□ -0.44
HIF1A-202ENST00000337138 PTMSP20962 102 aa12.28□□□□□ -0.44
HIF1A-202ENST00000337138 AMPHP49418 695 aa12.28□□□□□ -0.44
HIF1A-202ENST00000337138 NUTM1Q86Y26 1132 aa12.28□□□□□ -0.44
HIF1A-202ENST00000337138 RPAP1Q9BWH6 1393 aaPredicted RBP12.28□□□□□ -0.44
HIF1A-202ENST00000337138 LAMB4A4D0S4 1761 aa12.28□□□□□ -0.44
HIF1A-202ENST00000337138 ARFGEF2Q9Y6D5 1785 aa12.28□□□□□ -0.44
HIF1A-202ENST00000337138 TTC21AQ8NDW8 1320 aa12.28□□□□□ -0.44
HIF1A-202ENST00000337138 UQCRHLA0A096LP55 91 aa12.27□□□□□ -0.44
HIF1A-202ENST00000337138 UQCRHP07919 91 aa12.27□□□□□ -0.44
HIF1A-202ENST00000337138 KIAA2012Q0VF49 1180 aa12.27□□□□□ -0.44
HIF1A-202ENST00000337138 USP42Q9H9J4 1324 aaKnown RBP12.27□□□□□ -0.44
HIF1A-202ENST00000337138 POLA2Q14181 598 aa12.27□□□□□ -0.45
HIF1A-202ENST00000337138 ZNF830Q96NB3 372 aaPredicted RBP12.27□□□□□ -0.45
HIF1A-202ENST00000337138 PDE1AP54750 535 aa12.27□□□□□ -0.45
HIF1A-202ENST00000337138 OVOS2A0A0G2JMS6 1433 aa12.27□□□□□ -0.45
HIF1A-202ENST00000337138 PNMA6EA0A0J9YXQ4 647 aa12.26□□□□□ -0.45
HIF1A-202ENST00000337138 MCCP23508 829 aa12.26□□□□□ -0.45
HIF1A-202ENST00000337138 TAOK2Q9UL54 1235 aa12.26□□□□□ -0.45
HIF1A-202ENST00000337138 PALD1Q9ULE6 856 aa12.26□□□□□ -0.45
HIF1A-202ENST00000337138 PXDNQ92626 1479 aa12.26□□□□□ -0.45
HIF1A-202ENST00000337138 STRCP1A6NGW2 1772 aa12.26□□□□□ -0.45
HIF1A-202ENST00000337138 EYA1Q99502 592 aa12.26□□□□□ -0.45
HIF1A-202ENST00000337138 JCADQ9P266 1359 aa12.26□□□□□ -0.45
HIF1A-202ENST00000337138 UNC5CLQ8IV45 518 aa12.26□□□□□ -0.45
HIF1A-202ENST00000337138 SLC26A8Q96RN1 970 aa12.26□□□□□ -0.45
HIF1A-202ENST00000337138 NGDNQ8NEJ9 315 aaKnown RBP12.25□□□□□ -0.45
HIF1A-202ENST00000337138 IL17REQ8NFR9 667 aa12.25□□□□□ -0.45
HIF1A-202ENST00000337138 TMX3Q96JJ7 454 aa12.25□□□□□ -0.45
HIF1A-202ENST00000337138 HTATSF1O43719 755 aaKnown RBP12.25□□□□□ -0.45
HIF1A-202ENST00000337138 PI4K2BQ8TCG2 481 aa12.25□□□□□ -0.45
HIF1A-202ENST00000337138 KCNB2Q92953 911 aa12.24□□□□□ -0.45
HIF1A-202ENST00000337138 SOS1Q07889 1333 aaPredicted RBP12.24□□□□□ -0.45
HIF1A-202ENST00000337138 BRD1O95696 1058 aa12.24□□□□□ -0.45
HIF1A-202ENST00000337138 MAPK8IP2Q13387 824 aaPredicted RBP12.24□□□□□ -0.45
HIF1A-202ENST00000337138 USP44Q9H0E7 712 aa12.24□□□□□ -0.45
HIF1A-202ENST00000337138 TMEM63CQ9P1W3 806 aa12.24□□□□□ -0.45
HIF1A-202ENST00000337138 SURF6O75683 361 aaKnown RBP12.23□□□□□ -0.45
HIF1A-202ENST00000337138 KCNJ4P48050 445 aa12.23□□□□□ -0.45
HIF1A-202ENST00000337138 TTC14Q96N46 770 aa12.23□□□□□ -0.45
HIF1A-202ENST00000337138 FIBPO43427 364 aa12.23□□□□□ -0.45
HIF1A-202ENST00000337138 CHAF1AQ13111 956 aaPredicted RBP12.23□□□□□ -0.45
HIF1A-202ENST00000337138 USHBP1Q8N6Y0 703 aa12.23□□□□□ -0.45
HIF1A-202ENST00000337138 AFDNP55196 1824 aaKnown RBP12.23□□□□□ -0.45
HIF1A-202ENST00000337138 AOX1Q06278 1338 aa12.23□□□□□ -0.45
HIF1A-202ENST00000337138 ANXA1P04083 346 aa12.23□□□□□ -0.45
HIF1A-202ENST00000337138 GNAI2P04899 355 aa12.23□□□□□ -0.45
HIF1A-202ENST00000337138 BABAM1Q9NWV8 329 aa12.23□□□□□ -0.45
HIF1A-202ENST00000337138 NWD2Q9ULI1 1742 aa12.23□□□□□ -0.45
HIF1A-202ENST00000337138 FAM177BA6PVY3 158 aa12.22□□□□□ -0.45
HIF1A-202ENST00000337138 EPB41L2O43491 1005 aaKnown RBP12.22□□□□□ -0.45
HIF1A-202ENST00000337138 CPA1P15085 419 aa12.22□□□□□ -0.45
HIF1A-202ENST00000337138 CCDC9Q9Y3X0 531 aaKnown RBP12.22□□□□□ -0.45
HIF1A-202ENST00000337138 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.22□□□□□ -0.45
HIF1A-202ENST00000337138 SSH3Q8TE77 659 aa12.22□□□□□ -0.45
HIF1A-202ENST00000337138 LRRCC1Q9C099 1032 aa12.22□□□□□ -0.45
HIF1A-202ENST00000337138 SNRKQ9NRH2 765 aa12.22□□□□□ -0.45
HIF1A-202ENST00000337138 LRRFIP2Q9Y608 721 aaKnown RBP12.22□□□□□ -0.45
HIF1A-202ENST00000337138 ADCY9O60503 1353 aa12.22□□□□□ -0.45
HIF1A-202ENST00000337138 XIRP1Q702N8 1843 aaKnown RBP12.22□□□□□ -0.45
HIF1A-202ENST00000337138 RBM33Q96EV2 1170 aaKnown RBP12.21□□□□□ -0.45
HIF1A-202ENST00000337138 ATP8B2P98198 1209 aa12.21□□□□□ -0.45
HIF1A-202ENST00000337138 ST3GAL1Q11201 340 aa12.21□□□□□ -0.45
HIF1A-202ENST00000337138 C17orf53Q8N3J3 647 aaPredicted RBP12.21□□□□□ -0.45
HIF1A-202ENST00000337138 ESYT1Q9BSJ8 1104 aa12.21□□□□□ -0.45
HIF1A-202ENST00000337138 MX1P20591 662 aa12.21□□□□□ -0.46
HIF1A-202ENST00000337138 CHMLP26374 656 aa12.21□□□□□ -0.46
HIF1A-202ENST00000337138 TSC1Q92574 1164 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms