RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 PDRG1Q9NUG6 133 aa14.28□□□□□ -0.12
FN1-202ENST00000336916 ASXL1Q8IXJ9 1541 aa14.28□□□□□ -0.12
FN1-202ENST00000336916 TRAK2O60296 914 aa14.28□□□□□ -0.12
FN1-202ENST00000336916 KIF4AO95239 1232 aa14.28□□□□□ -0.12
FN1-202ENST00000336916 DRC1Q96MC2 740 aa14.28□□□□□ -0.12
FN1-202ENST00000336916 SIL1Q9H173 461 aa14.28□□□□□ -0.12
FN1-202ENST00000336916 LRRC45Q96CN5 670 aa14.28□□□□□ -0.12
FN1-202ENST00000336916 ANKRD18BA2A2Z9 1011 aa14.28□□□□□ -0.12
FN1-202ENST00000336916 USP37Q86T82 979 aa14.28□□□□□ -0.12
FN1-202ENST00000336916 PATL2C9JE40 543 aaKnown RBP14.28□□□□□ -0.12
FN1-202ENST00000336916 GIGYF2Q6Y7W6 1299 aaKnown RBP14.28□□□□□ -0.12
FN1-202ENST00000336916 ATP2B1P20020 1258 aa14.27□□□□□ -0.12
FN1-202ENST00000336916 ANAPC15P60006 121 aa14.27□□□□□ -0.12
FN1-202ENST00000336916 KANK3Q6NY19 840 aa14.27□□□□□ -0.12
FN1-202ENST00000336916 SCAND2PQ9GZW5 306 aaPredicted RBP14.27□□□□□ -0.12
FN1-202ENST00000336916 GBP3Q9H0R5 595 aa14.27□□□□□ -0.12
FN1-202ENST00000336916 IDH1O75874 414 aaKnown RBP14.27□□□□□ -0.12
FN1-202ENST00000336916 KIAA0754O94854 1291 aa14.27□□□□□ -0.12
FN1-202ENST00000336916 CCDC148Q8NFR7 591 aa14.27□□□□□ -0.12
FN1-202ENST00000336916 FIBPO43427 364 aa14.27□□□□□ -0.13
FN1-202ENST00000336916 NGLY1Q96IV0 654 aa14.27□□□□□ -0.13
FN1-202ENST00000336916 SLC26A8Q96RN1 970 aa14.27□□□□□ -0.13
FN1-202ENST00000336916 ENOX2Q16206 610 aaKnown RBP14.27□□□□□ -0.13
FN1-202ENST00000336916 ABCF2Q9UG63 623 aa14.27□□□□□ -0.13
FN1-202ENST00000336916 NAIPQ13075 1403 aa14.26□□□□□ -0.13
FN1-202ENST00000336916 EPB41L2O43491 1005 aaKnown RBP14.26□□□□□ -0.13
FN1-202ENST00000336916 KIAA1328Q86T90 577 aa14.26□□□□□ -0.13
FN1-202ENST00000336916 TAOK3Q9H2K8 898 aa14.26□□□□□ -0.13
FN1-202ENST00000336916 CCDC172P0C7W6 258 aa14.26□□□□□ -0.13
FN1-202ENST00000336916 CCDC83Q8IWF9 413 aa14.26□□□□□ -0.13
FN1-202ENST00000336916 TAF4BQ92750 862 aa14.26□□□□□ -0.13
FN1-202ENST00000336916 AXDND1Q5T1B0 1012 aaPredicted RBP14.26□□□□□ -0.13
FN1-202ENST00000336916 DDX46Q7L014 1031 aaKnown RBP14.26□□□□□ -0.13
FN1-202ENST00000336916 SMARCC1Q92922 1105 aaPredicted RBP14.25□□□□□ -0.13
FN1-202ENST00000336916 NUP160Q12769 1436 aa14.25□□□□□ -0.13
FN1-202ENST00000336916 FAM114A1Q8IWE2 563 aa14.25□□□□□ -0.13
FN1-202ENST00000336916 EIF5P55010 431 aaKnown RBP14.25□□□□□ -0.13
FN1-202ENST00000336916 HMG20BQ9P0W2 317 aa14.25□□□□□ -0.13
FN1-202ENST00000336916 TOM1O60784 492 aa14.24□□□□□ -0.13
FN1-202ENST00000336916 GTPBP4Q9BZE4 634 aaKnown RBP14.24□□□□□ -0.13
FN1-202ENST00000336916 NYXQ9GZU5 481 aa14.24□□□□□ -0.13
FN1-202ENST00000336916 DUSP27Q5VZP5 1158 aa14.24□□□□□ -0.13
FN1-202ENST00000336916 DHX37Q8IY37 1157 aaKnown RBP14.24□□□□□ -0.13
FN1-202ENST00000336916 UHRF1BP1LA0JNW5 1464 aa14.24□□□□□ -0.13
FN1-202ENST00000336916 SPA17Q15506 151 aa14.24□□□□□ -0.13
FN1-202ENST00000336916 NUP62CLQ9H1M0 184 aa14.24□□□□□ -0.13
FN1-202ENST00000336916 PDZRN3Q9UPQ7 1066 aa14.24□□□□□ -0.13
FN1-202ENST00000336916 ANKRD36BQ8N2N9 1353 aa14.24□□□□□ -0.13
FN1-202ENST00000336916 PIK3R4Q99570 1358 aa14.24□□□□□ -0.13
FN1-202ENST00000336916 WASLO00401 505 aaPredicted RBP14.24□□□□□ -0.13
FN1-202ENST00000336916 BMP15O95972 392 aa14.24□□□□□ -0.13
FN1-202ENST00000336916 ABCC5O15440 1437 aa14.24□□□□□ -0.13
FN1-202ENST00000336916 UPF3BQ9BZI7 483 aaKnown RBP14.23□□□□□ -0.13
FN1-202ENST00000336916 ANKRD62A6NC57 917 aa14.23□□□□□ -0.13
FN1-202ENST00000336916 CWC25Q9NXE8 425 aaPredicted RBP14.23□□□□□ -0.13
FN1-202ENST00000336916 GCC2Q8IWJ2 1684 aa14.23□□□□□ -0.13
FN1-202ENST00000336916 PLXNC1O60486 1568 aa14.23□□□□□ -0.13
FN1-202ENST00000336916 NPHP3Q7Z494 1330 aa14.23□□□□□ -0.13
FN1-202ENST00000336916 STAMBPO95630 424 aa14.23□□□□□ -0.13
FN1-202ENST00000336916 USP8P40818 1118 aa14.23□□□□□ -0.13
FN1-202ENST00000336916 TTLL5Q6EMB2 1281 aa14.23□□□□□ -0.13
FN1-202ENST00000336916 TMTC2Q8N394 836 aa14.23□□□□□ -0.13
FN1-202ENST00000336916 IL16Q14005 1332 aa14.23□□□□□ -0.13
FN1-202ENST00000336916 CASTP20810 708 aaKnown RBP14.23□□□□□ -0.13
FN1-202ENST00000336916 TTLL12Q14166 644 aaPredicted RBP14.23□□□□□ -0.13
FN1-202ENST00000336916 CCDC112Q8NEF3 446 aa14.23□□□□□ -0.13
FN1-202ENST00000336916 SLC12A7Q9Y666 1083 aa14.23□□□□□ -0.13
FN1-202ENST00000336916 KIAA0556O60303 1618 aa14.23□□□□□ -0.13
FN1-202ENST00000336916 ZNF213O14771 459 aa14.23□□□□□ -0.13
FN1-202ENST00000336916 ABCA5Q8WWZ7 1642 aa14.23□□□□□ -0.13
FN1-202ENST00000336916 MAP3K11Q16584 847 aa14.23□□□□□ -0.13
FN1-202ENST00000336916 CWC27Q6UX04 472 aaKnown RBP14.23□□□□□ -0.13
FN1-202ENST00000336916 JAKMIP1Q96N16 626 aaKnown RBP14.23□□□□□ -0.13
FN1-202ENST00000336916 PLVAPQ9BX97 442 aa14.23□□□□□ -0.13
FN1-202ENST00000336916 TNRQ92752 1358 aa14.23□□□□□ -0.13
FN1-202ENST00000336916 SHROOM2Q13796 1616 aa14.23□□□□□ -0.13
FN1-202ENST00000336916 ZSCAN12O43309 604 aa14.22□□□□□ -0.13
FN1-202ENST00000336916 CALML4Q96GE6 196 aa14.22□□□□□ -0.13
FN1-202ENST00000336916 SCLT1Q96NL6 688 aa14.22□□□□□ -0.13
FN1-202ENST00000336916 TRPM2O94759 1503 aa14.22□□□□□ -0.13
FN1-202ENST00000336916 SSBP05455 408 aaKnown RBP eCLIP14.22□□□□□ -0.13
FN1-202ENST00000336916 PHF8Q9UPP1 1060 aa14.22□□□□□ -0.13
FN1-202ENST00000336916 CCDC152Q4G0S7 254 aa14.22□□□□□ -0.13
FN1-202ENST00000336916 SOS1Q07889 1333 aaPredicted RBP14.22□□□□□ -0.13
FN1-202ENST00000336916 FMNL3Q8IVF7 1028 aa14.22□□□□□ -0.13
FN1-202ENST00000336916 TCP11L1Q9NUJ3 509 aa14.22□□□□□ -0.13
FN1-202ENST00000336916 RRS1Q15050 365 aaKnown RBP14.22□□□□□ -0.13
FN1-202ENST00000336916 RPRD2Q5VT52 1461 aaKnown RBP14.22□□□□□ -0.13
FN1-202ENST00000336916 EVI5LQ96CN4 794 aa14.22□□□□□ -0.13
FN1-202ENST00000336916 CABP5Q9NP86 173 aa14.22□□□□□ -0.13
FN1-202ENST00000336916 RFC4P35249 363 aa14.21□□□□□ -0.13
FN1-202ENST00000336916 TTC12Q9H892 705 aaPredicted RBP14.21□□□□□ -0.13
FN1-202ENST00000336916 ABCC10Q5T3U5 1492 aa14.21□□□□□ -0.13
FN1-202ENST00000336916 ZFYP08048 801 aaPredicted RBP14.21□□□□□ -0.13
FN1-202ENST00000336916 C11orf95C9JLR9 678 aaPredicted RBP14.21□□□□□ -0.13
FN1-202ENST00000336916 PRPF40AO75400 957 aaKnown RBP14.21□□□□□ -0.13
FN1-202ENST00000336916 PDCL2Q8N4E4 241 aa14.21□□□□□ -0.13
FN1-202ENST00000336916 SEPT11Q9NVA2 429 aaKnown RBP14.21□□□□□ -0.13
FN1-202ENST00000336916 SSRP1Q08945 709 aaKnown RBP14.21□□□□□ -0.14
FN1-202ENST00000336916 IFNL2Q8IZJ0 200 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms