RNA–Protein interactions for RNA: ENST00000336824.8

FNDC3B-201, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 7,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-201ENST00000336824 CAVIN4Q5BKX8 364 aa11.24□□□□□ -0.61
FNDC3B-201ENST00000336824 ZNF790Q6PG37 636 aa11.24□□□□□ -0.61
FNDC3B-201ENST00000336824 BRINP3Q76B58 766 aa11.24□□□□□ -0.61
FNDC3B-201ENST00000336824 MYO3AQ8NEV4 1616 aa11.24□□□□□ -0.61
FNDC3B-201ENST00000336824 SLC52A2Q9HAB3 445 aa11.24□□□□□ -0.61
FNDC3B-201ENST00000336824 H3BQV1 296 aa11.24□□□□□ -0.61
FNDC3B-201ENST00000336824 IFFO2Q5TF58 517 aa11.24□□□□□ -0.61
FNDC3B-201ENST00000336824 NBPF6Q5VWK0 638 aa11.24□□□□□ -0.61
FNDC3B-201ENST00000336824 SYAP1Q96A49 352 aaPredicted RBP11.24□□□□□ -0.61
FNDC3B-201ENST00000336824 NBPF4Q96M43 638 aa11.24□□□□□ -0.61
FNDC3B-201ENST00000336824 KSR2Q6VAB6 950 aa11.24□□□□□ -0.61
FNDC3B-201ENST00000336824 LRRFIP2Q9Y608 721 aaKnown RBP11.24□□□□□ -0.61
FNDC3B-201ENST00000336824 ALDH1L1O75891 902 aa11.24□□□□□ -0.61
FNDC3B-201ENST00000336824 SETDB2Q96T68 719 aa11.24□□□□□ -0.61
FNDC3B-201ENST00000336824 ARHGEF28Q8N1W1 1705 aaKnown RBP11.23□□□□□ -0.61
FNDC3B-201ENST00000336824 SART3Q15020 963 aaKnown RBP11.23□□□□□ -0.61
FNDC3B-201ENST00000336824 FAM98CQ17RN3 349 aaKnown RBP11.23□□□□□ -0.61
FNDC3B-201ENST00000336824 KIF20BQ96Q89 1820 aa11.23□□□□□ -0.61
FNDC3B-201ENST00000336824 SPATA31A3Q5VYP0 1347 aa11.23□□□□□ -0.61
FNDC3B-201ENST00000336824 NOL8Q76FK4 1167 aaKnown RBP11.23□□□□□ -0.61
FNDC3B-201ENST00000336824 TNS3Q68CZ2 1445 aa11.23□□□□□ -0.61
FNDC3B-201ENST00000336824 XAGE3Q8WTP9 111 aa11.23□□□□□ -0.61
FNDC3B-201ENST00000336824 NACAP1Q9BZK3 213 aa11.23□□□□□ -0.61
FNDC3B-201ENST00000336824 MED14O60244 1454 aa11.23□□□□□ -0.61
FNDC3B-201ENST00000336824 GOLGA6L6A8MZA4 724 aa11.23□□□□□ -0.61
FNDC3B-201ENST00000336824 GPTP24298 496 aa11.23□□□□□ -0.61
FNDC3B-201ENST00000336824 CTDP1Q9Y5B0 961 aaPredicted RBP11.23□□□□□ -0.61
FNDC3B-201ENST00000336824 CPLX1O14810 134 aa11.22□□□□□ -0.61
FNDC3B-201ENST00000336824 C8orf58Q8NAV2 365 aa11.22□□□□□ -0.61
FNDC3B-201ENST00000336824 TRPC5Q9UL62 973 aaPredicted RBP11.22□□□□□ -0.61
FNDC3B-201ENST00000336824 UBR1Q8IWV7 1749 aa11.22□□□□□ -0.61
FNDC3B-201ENST00000336824 TRIM29Q14134 588 aa11.22□□□□□ -0.61
FNDC3B-201ENST00000336824 NFXL1Q6ZNB6 911 aa11.22□□□□□ -0.61
FNDC3B-201ENST00000336824 COPS6Q7L5N1 327 aa11.22□□□□□ -0.61
FNDC3B-201ENST00000336824 MAP2P11137 1827 aaKnown RBP11.22□□□□□ -0.61
FNDC3B-201ENST00000336824 CCDC152Q4G0S7 254 aa11.22□□□□□ -0.61
FNDC3B-201ENST00000336824 ZNF772Q68DY9 489 aaPredicted RBP11.22□□□□□ -0.61
FNDC3B-201ENST00000336824 NBPF5PQ86XG9 351 aaPredicted RBP11.22□□□□□ -0.61
FNDC3B-201ENST00000336824 SLKQ9H2G2 1235 aaPredicted RBP11.22□□□□□ -0.61
FNDC3B-201ENST00000336824 GLRX3O76003 335 aaKnown RBP11.22□□□□□ -0.61
FNDC3B-201ENST00000336824 SLC5A1P13866 664 aa11.22□□□□□ -0.61
FNDC3B-201ENST00000336824 DDX46Q7L014 1031 aaKnown RBP11.22□□□□□ -0.61
FNDC3B-201ENST00000336824 TRIM44Q96DX7 344 aaPredicted RBP11.22□□□□□ -0.61
FNDC3B-201ENST00000336824 C22orf23Q9BZE7 217 aa11.22□□□□□ -0.61
FNDC3B-201ENST00000336824 PHF14O94880 888 aa11.22□□□□□ -0.61
FNDC3B-201ENST00000336824 ANKIB1Q9P2G1 1089 aa11.22□□□□□ -0.61
FNDC3B-201ENST00000336824 UBE3BQ7Z3V4 1068 aa11.22□□□□□ -0.61
FNDC3B-201ENST00000336824 MRPL50Q8N5N7 158 aaKnown RBP11.22□□□□□ -0.61
FNDC3B-201ENST00000336824 ADAMTS13Q76LX8 1427 aa11.21□□□□□ -0.61
FNDC3B-201ENST00000336824 FKBP4Q02790 459 aaKnown RBP eCLIP11.21□□□□□ -0.615e-14■□□□□ 10.4
FNDC3B-201ENST00000336824 NBPF14Q5TI25 921 aa11.21□□□□□ -0.61
FNDC3B-201ENST00000336824 GRM8O00222 908 aa11.21□□□□□ -0.62
FNDC3B-201ENST00000336824 WDR17Q8IZU2 1322 aa11.21□□□□□ -0.62
FNDC3B-201ENST00000336824 DZIP3Q86Y13 1208 aaKnown RBP11.21□□□□□ -0.62
FNDC3B-201ENST00000336824 DDX21Q9NR30 783 aaKnown RBP eCLIP11.21□□□□□ -0.62
FNDC3B-201ENST00000336824 EXOC6BQ9Y2D4 811 aa11.21□□□□□ -0.62
FNDC3B-201ENST00000336824 NCOA3Q9Y6Q9 1424 aa11.2□□□□□ -0.62
FNDC3B-201ENST00000336824 VAMP4O75379 141 aa11.2□□□□□ -0.62
FNDC3B-201ENST00000336824 THRAP3Q9Y2W1 955 aaKnown RBP11.2□□□□□ -0.62
FNDC3B-201ENST00000336824 SLIT1O75093 1534 aa11.2□□□□□ -0.62
FNDC3B-201ENST00000336824 CCDC85AQ96PX6 553 aaPredicted RBP11.2□□□□□ -0.62
FNDC3B-201ENST00000336824 TECPR2O15040 1411 aa11.2□□□□□ -0.62
FNDC3B-201ENST00000336824 MCM2P49736 904 aa11.2□□□□□ -0.62
FNDC3B-201ENST00000336824 ATP5J2-PTCD1G3V325 749 aa11.2□□□□□ -0.62
FNDC3B-201ENST00000336824 LINS1Q8NG48 757 aa11.2□□□□□ -0.62
FNDC3B-201ENST00000336824 CHL1O00533 1208 aa11.19□□□□□ -0.62
FNDC3B-201ENST00000336824 IGSF1Q8N6C5 1336 aa11.19□□□□□ -0.62
FNDC3B-201ENST00000336824 LRP2BPQ9P2M1 347 aa11.19□□□□□ -0.62
FNDC3B-201ENST00000336824 TRIM35Q9UPQ4 493 aa11.19□□□□□ -0.62
FNDC3B-201ENST00000336824 C1orf167Q5SNV9 1468 aa11.19□□□□□ -0.62
FNDC3B-201ENST00000336824 NRDCO43847 1150 aa11.18□□□□□ -0.62
FNDC3B-201ENST00000336824 PHKG2P15735 406 aa11.18□□□□□ -0.62
FNDC3B-201ENST00000336824 IL1RAPL2Q9NP60 686 aa11.18□□□□□ -0.62
FNDC3B-201ENST00000336824 CTNNA3Q9UI47 895 aa11.18□□□□□ -0.62
FNDC3B-201ENST00000336824 MX1P20591 662 aa11.18□□□□□ -0.62
FNDC3B-201ENST00000336824 UTP14AQ9BVJ6 771 aaKnown RBP11.18□□□□□ -0.62
FNDC3B-201ENST00000336824 CCNL1Q9UK58 526 aaPredicted RBP11.18□□□□□ -0.62
FNDC3B-201ENST00000336824 PTMAP06454 111 aaKnown RBP11.18□□□□□ -0.62
FNDC3B-201ENST00000336824 NIP7Q9Y221 180 aaKnown RBP eCLIP11.18□□□□□ -0.62
FNDC3B-201ENST00000336824 DCCP43146 1447 aa11.18□□□□□ -0.62
FNDC3B-201ENST00000336824 ERBB3P21860 1342 aa11.18□□□□□ -0.62
FNDC3B-201ENST00000336824 SLF2Q8IX21 1173 aa11.18□□□□□ -0.62
FNDC3B-201ENST00000336824 NLRP3Q96P20 1036 aa11.18□□□□□ -0.62
FNDC3B-201ENST00000336824 RAD21O60216 631 aa11.18□□□□□ -0.62
FNDC3B-201ENST00000336824 SF3A1Q15459 793 aaKnown RBP11.18□□□□□ -0.62
FNDC3B-201ENST00000336824 TFCP2L1Q9NZI6 479 aa11.18□□□□□ -0.62
FNDC3B-201ENST00000336824 MARCH6O60337 910 aa11.18□□□□□ -0.62
FNDC3B-201ENST00000336824 TPTE2Q6XPS3 522 aa11.18□□□□□ -0.62
FNDC3B-201ENST00000336824 LDHAL6AQ6ZMR3 332 aa11.17□□□□□ -0.62
FNDC3B-201ENST00000336824 USP32Q8NFA0 1604 aa11.17□□□□□ -0.62
FNDC3B-201ENST00000336824 ANXA1P04083 346 aa11.17□□□□□ -0.62
FNDC3B-201ENST00000336824 TRAPPC3LQ5T215 181 aa11.17□□□□□ -0.62
FNDC3B-201ENST00000336824 C20orf194Q5TEA3 1177 aa11.17□□□□□ -0.62
FNDC3B-201ENST00000336824 PRIM1P49642 420 aaKnown RBP11.17□□□□□ -0.62
FNDC3B-201ENST00000336824 CPS1P31327 1500 aa11.16□□□□□ -0.62
FNDC3B-201ENST00000336824 DHX16O60231 1041 aaKnown RBP11.16□□□□□ -0.62
FNDC3B-201ENST00000336824 RASSF8Q8NHQ8 419 aa11.16□□□□□ -0.62
FNDC3B-201ENST00000336824 XBP1P17861 261 aa11.16□□□□□ -0.62
FNDC3B-201ENST00000336824 TSHZ2Q9NRE2 1034 aa11.16□□□□□ -0.62
FNDC3B-201ENST00000336824 RAI14Q9P0K7 980 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms