RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 PPP1R9BQ96SB3 815 aa19.93■□□□□ 0.78
CDC42EP4-201ENST00000335793 CGNQ9P2M7 1197 aaKnown RBP19.93■□□□□ 0.78
CDC42EP4-201ENST00000335793 CWC27Q6UX04 472 aaKnown RBP19.93■□□□□ 0.78
CDC42EP4-201ENST00000335793 TMEM51Q9NW97 253 aa19.93■□□□□ 0.78
CDC42EP4-201ENST00000335793 USP6P35125 1406 aa19.92■□□□□ 0.78
CDC42EP4-201ENST00000335793 DLG5Q8TDM6 1919 aa19.92■□□□□ 0.78
CDC42EP4-201ENST00000335793 CRB1P82279 1406 aa19.92■□□□□ 0.78
CDC42EP4-201ENST00000335793 IL17REQ8NFR9 667 aa19.92■□□□□ 0.78
CDC42EP4-201ENST00000335793 SYAP1Q96A49 352 aaPredicted RBP19.92■□□□□ 0.78
CDC42EP4-201ENST00000335793 KCNJ4P48050 445 aa19.92■□□□□ 0.78
CDC42EP4-201ENST00000335793 USP44Q9H0E7 712 aa19.92■□□□□ 0.78
CDC42EP4-201ENST00000335793 SPDYE4A6NLX3 237 aa19.91■□□□□ 0.78
CDC42EP4-201ENST00000335793 DNTTIP2Q5QJE6 756 aaKnown RBP19.91■□□□□ 0.78
CDC42EP4-201ENST00000335793 IPO4Q8TEX9 1081 aaKnown RBP19.91■□□□□ 0.78
CDC42EP4-201ENST00000335793 LRSAM1Q6UWE0 723 aa19.91■□□□□ 0.78
CDC42EP4-201ENST00000335793 TEFQ10587 303 aa19.9■□□□□ 0.78
CDC42EP4-201ENST00000335793 DDX54Q8TDD1 881 aaKnown RBP19.9■□□□□ 0.78
CDC42EP4-201ENST00000335793 SPG7Q9UQ90 795 aa19.9■□□□□ 0.78
CDC42EP4-201ENST00000335793 TTC21AQ8NDW8 1320 aa19.89■□□□□ 0.77
CDC42EP4-201ENST00000335793 SBNO1A3KN83 1393 aa19.89■□□□□ 0.77
CDC42EP4-201ENST00000335793 KNDC1Q76NI1 1749 aa19.89■□□□□ 0.77
CDC42EP4-201ENST00000335793 PI4KAP2A4QPH2 592 aa19.89■□□□□ 0.77
CDC42EP4-201ENST00000335793 PI4KAP1Q8N8J0 262 aa19.89■□□□□ 0.77
CDC42EP4-201ENST00000335793 RHPN1Q8TCX5 695 aa19.89■□□□□ 0.77
CDC42EP4-201ENST00000335793 DIAPH3Q9NSV4 1193 aa19.88■□□□□ 0.77
CDC42EP4-201ENST00000335793 C9orf78Q9NZ63 289 aaPredicted RBP19.88■□□□□ 0.77
CDC42EP4-201ENST00000335793 ARHGEF10O15013 1369 aa19.88■□□□□ 0.77
CDC42EP4-201ENST00000335793 HOXC9P31274 260 aa19.88■□□□□ 0.77
CDC42EP4-201ENST00000335793 CNTROBQ8N137 903 aa19.87■□□□□ 0.77
CDC42EP4-201ENST00000335793 TSPY26PQ9H489 355 aa19.87■□□□□ 0.77
CDC42EP4-201ENST00000335793 NBPF7P0C2Y1 421 aaPredicted RBP19.87■□□□□ 0.77
CDC42EP4-201ENST00000335793 CERS3Q8IU89 383 aa19.87■□□□□ 0.77
CDC42EP4-201ENST00000335793 BRD1O95696 1058 aa19.87■□□□□ 0.77
CDC42EP4-201ENST00000335793 CPA1P15085 419 aa19.86■□□□□ 0.77
CDC42EP4-201ENST00000335793 IBTKQ9P2D0 1353 aaPredicted RBP19.86■□□□□ 0.77
CDC42EP4-201ENST00000335793 FIBPO43427 364 aa19.86■□□□□ 0.77
CDC42EP4-201ENST00000335793 GADD45BO75293 160 aaPredicted RBP19.86■□□□□ 0.77
CDC42EP4-201ENST00000335793 ANAPC15P60006 121 aa19.86■□□□□ 0.77
CDC42EP4-201ENST00000335793 CHPF2Q9P2E5 772 aa19.86■□□□□ 0.77
CDC42EP4-201ENST00000335793 SMC3Q9UQE7 1217 aa19.86■□□□□ 0.77
CDC42EP4-201ENST00000335793 WDR33Q9C0J8 1336 aaKnown RBP19.86■□□□□ 0.77
CDC42EP4-201ENST00000335793 OVOS2A0A0J9YW53 1432 aa19.86■□□□□ 0.77
CDC42EP4-201ENST00000335793 OVOS2Q6IE36 1432 aa19.86■□□□□ 0.77
CDC42EP4-201ENST00000335793 SOS1Q07889 1333 aaPredicted RBP19.86■□□□□ 0.77
CDC42EP4-201ENST00000335793 IGSF1Q8N6C5 1336 aa19.86■□□□□ 0.77
CDC42EP4-201ENST00000335793 KIF1BPQ96EK5 621 aa19.86■□□□□ 0.77
CDC42EP4-201ENST00000335793 IL25Q9H293 177 aa19.86■□□□□ 0.77
CDC42EP4-201ENST00000335793 USP48Q86UV5 1035 aa19.85■□□□□ 0.77
CDC42EP4-201ENST00000335793 LGR6Q9HBX8 967 aa19.84■□□□□ 0.77
CDC42EP4-201ENST00000335793 CHMP3Q9Y3E7 222 aa19.84■□□□□ 0.77
CDC42EP4-201ENST00000335793 MPRIPQ6WCQ1 1025 aa19.84■□□□□ 0.77
CDC42EP4-201ENST00000335793 CCDC94Q9BW85 323 aaPredicted RBP19.84■□□□□ 0.77
CDC42EP4-201ENST00000335793 HTATSF1O43719 755 aaKnown RBP19.84■□□□□ 0.77
CDC42EP4-201ENST00000335793 PHF14O94880 888 aa19.84■□□□□ 0.77
CDC42EP4-201ENST00000335793 CLASRPQ8N2M8 674 aaKnown RBP19.84■□□□□ 0.77
CDC42EP4-201ENST00000335793 CASTP20810 708 aaKnown RBP19.83■□□□□ 0.77
CDC42EP4-201ENST00000335793 AIMP1Q12904 312 aaKnown RBP19.83■□□□□ 0.77
CDC42EP4-201ENST00000335793 DNAAF4Q8WXU2 420 aa19.83■□□□□ 0.77
CDC42EP4-201ENST00000335793 SPATA31D1Q6ZQQ2 1576 aa19.83■□□□□ 0.76
CDC42EP4-201ENST00000335793 IFIT2P09913 472 aaKnown RBP19.83■□□□□ 0.76
CDC42EP4-201ENST00000335793 RAB11FIP3O75154 756 aa19.82■□□□□ 0.76
CDC42EP4-201ENST00000335793 INTS4Q96HW7 963 aaKnown RBP19.82■□□□□ 0.76
CDC42EP4-201ENST00000335793 REREQ9P2R6 1566 aa19.82■□□□□ 0.76
CDC42EP4-201ENST00000335793 VPS37CA5D8V6 355 aaPredicted RBP19.82■□□□□ 0.76
CDC42EP4-201ENST00000335793 MAP3K5Q99683 1374 aa19.82■□□□□ 0.76
CDC42EP4-201ENST00000335793 KCNQ3O43525 872 aa19.82■□□□□ 0.76
CDC42EP4-201ENST00000335793 CUL4AQ13619 759 aa19.82■□□□□ 0.76
CDC42EP4-201ENST00000335793 CCDC39Q9UFE4 941 aa19.82■□□□□ 0.76
CDC42EP4-201ENST00000335793 CNPY2Q9Y2B0 182 aa19.82■□□□□ 0.76
CDC42EP4-201ENST00000335793 BTBD11A6QL63 1104 aa19.81■□□□□ 0.76
CDC42EP4-201ENST00000335793 STAP2Q9UGK3 403 aa19.81■□□□□ 0.76
CDC42EP4-201ENST00000335793 PSME1Q06323 249 aa19.81■□□□□ 0.76
CDC42EP4-201ENST00000335793 ZNF530Q6P9A1 599 aaPredicted RBP19.81■□□□□ 0.76
CDC42EP4-201ENST00000335793 SSH3Q8TE77 659 aa19.81■□□□□ 0.76
CDC42EP4-201ENST00000335793 USP31Q70CQ4 1352 aa19.8■□□□□ 0.76
CDC42EP4-201ENST00000335793 AK2P54819 239 aa19.8■□□□□ 0.76
CDC42EP4-201ENST00000335793 CCDC83Q8IWF9 413 aa19.8■□□□□ 0.76
CDC42EP4-201ENST00000335793 NOL7Q9UMY1 257 aaKnown RBP19.8■□□□□ 0.76
CDC42EP4-201ENST00000335793 KCNA6P17658 529 aa19.8■□□□□ 0.76
CDC42EP4-201ENST00000335793 HSPA4P34932 840 aa19.8■□□□□ 0.76
CDC42EP4-201ENST00000335793 PRPF40BQ6NWY9 871 aaKnown RBP19.8■□□□□ 0.76
CDC42EP4-201ENST00000335793 JAKMIP1Q96N16 626 aaKnown RBP19.8■□□□□ 0.76
CDC42EP4-201ENST00000335793 PA2G4Q9UQ80 394 aaKnown RBP19.8■□□□□ 0.76
CDC42EP4-201ENST00000335793 HSP90AB4PQ58FF6 505 aa19.79■□□□□ 0.76
CDC42EP4-201ENST00000335793 RASEFQ8IZ41 740 aa19.79■□□□□ 0.76
CDC42EP4-201ENST00000335793 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.79■□□□□ 0.76
CDC42EP4-201ENST00000335793 TECPR2O15040 1411 aa19.79■□□□□ 0.76
CDC42EP4-201ENST00000335793 ADAMTS13Q76LX8 1427 aa19.79■□□□□ 0.76
CDC42EP4-201ENST00000335793 KLHL34Q8N239 644 aa19.79■□□□□ 0.76
CDC42EP4-201ENST00000335793 RUFY2Q8WXA3 655 aa19.79■□□□□ 0.76
CDC42EP4-201ENST00000335793 SNX14Q9Y5W7 946 aa19.79■□□□□ 0.76
CDC42EP4-201ENST00000335793 SGSM2O43147 1006 aa19.78■□□□□ 0.76
CDC42EP4-201ENST00000335793 LRRC59Q96AG4 307 aaKnown RBP19.78■□□□□ 0.76
CDC42EP4-201ENST00000335793 ZKSCAN5Q9Y2L8 839 aa19.78■□□□□ 0.76
CDC42EP4-201ENST00000335793 SALL3Q9BXA9 1300 aa19.78■□□□□ 0.76
CDC42EP4-201ENST00000335793 UTP14CQ5TAP6 766 aaKnown RBP19.78■□□□□ 0.76
CDC42EP4-201ENST00000335793 GPATCH3Q96I76 525 aa19.78■□□□□ 0.76
CDC42EP4-201ENST00000335793 USP25Q9UHP3 1055 aa19.78■□□□□ 0.76
CDC42EP4-201ENST00000335793 LIMCH1Q9UPQ0 1083 aa19.78■□□□□ 0.76
CDC42EP4-201ENST00000335793 C1orf141Q5JVX7 400 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms