RNA–Protein interactions for RNA: ENST00000335183.10

CDKN3-202, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDKN3, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-202ENST00000335183 ZBTB1Q9Y2K1 713 aa32.93■■■□□ 2.86
CDKN3-202ENST00000335183 COL15A1P39059 1388 aa32.93■■■□□ 2.86
CDKN3-202ENST00000335183 U2SURPO15042 1029 aaKnown RBP32.91■■■□□ 2.86
CDKN3-202ENST00000335183 C9orf131Q5VYM1 1079 aa32.9■■■□□ 2.86
CDKN3-202ENST00000335183 NARFQ9UHQ1 456 aa32.9■■■□□ 2.86
CDKN3-202ENST00000335183 COL3A1P02461 1466 aaPredicted RBP32.9■■■□□ 2.86
CDKN3-202ENST00000335183 TTC5Q8N0Z6 440 aa32.88■■■□□ 2.85
CDKN3-202ENST00000335183 VSIG10Q8N0Z9 540 aa32.88■■■□□ 2.85
CDKN3-202ENST00000335183 CEP350Q5VT06 3117 aa32.87■■■□□ 2.85
CDKN3-202ENST00000335183 SBF1O95248 1867 aa32.87■■■□□ 2.85
CDKN3-202ENST00000335183 NFIXQ14938 502 aa32.87■■■□□ 2.85
CDKN3-202ENST00000335183 NMRK2Q9NPI5 230 aa32.87■■■□□ 2.85
CDKN3-202ENST00000335183 NRXN2Q9P2S2 1712 aa32.86■■■□□ 2.85
CDKN3-202ENST00000335183 CANXP27824 592 aaKnown RBP32.86■■■□□ 2.85
CDKN3-202ENST00000335183 NPC1L1Q9UHC9 1359 aa32.85■■■□□ 2.85
CDKN3-202ENST00000335183 SIPA1L3O60292 1781 aaPredicted RBP32.85■■■□□ 2.85
CDKN3-202ENST00000335183 TOMM70O94826 608 aa32.84■■■□□ 2.85
CDKN3-202ENST00000335183 TEFQ10587 303 aa32.84■■■□□ 2.85
CDKN3-202ENST00000335183 GAS2L2Q8NHY3 880 aa32.83■■■□□ 2.85
CDKN3-202ENST00000335183 BCL2L12Q9HB09 334 aa32.83■■■□□ 2.85
CDKN3-202ENST00000335183 DLEC1Q9Y238 1755 aa32.83■■■□□ 2.85
CDKN3-202ENST00000335183 RNF181Q9P0P0 153 aa32.82■■■□□ 2.84
CDKN3-202ENST00000335183 GNAT3A8MTJ3 354 aa32.81■■■□□ 2.84
CDKN3-202ENST00000335183 STARD3NLO95772 234 aa32.81■■■□□ 2.84
CDKN3-202ENST00000335183 SERPINB2P05120 415 aa32.81■■■□□ 2.84
CDKN3-202ENST00000335183 IL17REQ8NFR9 667 aa32.8■■■□□ 2.84
CDKN3-202ENST00000335183 BICDL1Q6ZP65 573 aa32.78■■■□□ 2.84
CDKN3-202ENST00000335183 ZNF496Q96IT1 587 aaPredicted RBP32.78■■■□□ 2.84
CDKN3-202ENST00000335183 ZNF790Q6PG37 636 aa32.77■■■□□ 2.84
CDKN3-202ENST00000335183 ZNF330Q9Y3S2 320 aaPredicted RBP32.77■■■□□ 2.84
CDKN3-202ENST00000335183 HEG1Q9ULI3 1381 aa32.77■■■□□ 2.84
CDKN3-202ENST00000335183 APLP1P51693 650 aa32.76■■■□□ 2.83
CDKN3-202ENST00000335183 C16orf71Q8IYS4 520 aaPredicted RBP32.76■■■□□ 2.83
CDKN3-202ENST00000335183 A0A087WZG4 1122 aa32.75■■■□□ 2.83
CDKN3-202ENST00000335183 EIF5P55010 431 aaKnown RBP32.75■■■□□ 2.83
CDKN3-202ENST00000335183 CCDC88AQ3V6T2 1871 aa32.75■■■□□ 2.83
CDKN3-202ENST00000335183 SCN7AQ01118 1682 aa32.75■■■□□ 2.83
CDKN3-202ENST00000335183 KDM2BQ8NHM5 1336 aa32.75■■■□□ 2.83
CDKN3-202ENST00000335183 RASSF7Q02833 373 aa32.74■■■□□ 2.83
CDKN3-202ENST00000335183 CARMIL3Q8ND23 1372 aa32.73■■■□□ 2.83
CDKN3-202ENST00000335183 TNRC6CQ9HCJ0 1690 aaKnown RBP32.73■■■□□ 2.83
CDKN3-202ENST00000335183 C2CD5Q86YS7 1000 aa32.73■■■□□ 2.83
CDKN3-202ENST00000335183 CFAP53Q96M91 514 aa32.73■■■□□ 2.83
CDKN3-202ENST00000335183 TEX13AQ9BXU3 409 aaPredicted RBP32.73■■■□□ 2.83
CDKN3-202ENST00000335183 ANKRD31Q8N7Z5 1873 aa32.71■■■□□ 2.83
CDKN3-202ENST00000335183 PRKAR2BP31323 418 aa32.71■■■□□ 2.83
CDKN3-202ENST00000335183 TTLL6Q8N841 843 aa32.7■■■□□ 2.83
CDKN3-202ENST00000335183 RBM46Q8TBY0 533 aaKnown RBP32.7■■■□□ 2.83
CDKN3-202ENST00000335183 PHACTR3Q96KR7 559 aa32.7■■■□□ 2.83
CDKN3-202ENST00000335183 FMNL2Q96PY5 1086 aa32.7■■■□□ 2.83
CDKN3-202ENST00000335183 WDR90Q96KV7 1748 aa32.69■■■□□ 2.82
CDKN3-202ENST00000335183 H0YIN7 160 aa32.69■■■□□ 2.82
CDKN3-202ENST00000335183 TBC1D9BQ66K14 1250 aa32.69■■■□□ 2.82
CDKN3-202ENST00000335183 RRAGCQ9HB90 399 aa32.69■■■□□ 2.82
CDKN3-202ENST00000335183 TBC1D2BQ9UPU7 963 aa32.69■■■□□ 2.82
CDKN3-202ENST00000335183 IFFO2Q5TF58 517 aa32.68■■■□□ 2.82
CDKN3-202ENST00000335183 CEMIPQ8WUJ3 1361 aa32.68■■■□□ 2.82
CDKN3-202ENST00000335183 BTBD11A6QL63 1104 aa32.67■■■□□ 2.82
CDKN3-202ENST00000335183 NPM2Q86SE8 214 aaKnown RBP32.67■■■□□ 2.82
CDKN3-202ENST00000335183 RSPH6AQ9H0K4 717 aa32.67■■■□□ 2.82
CDKN3-202ENST00000335183 TIAM2Q8IVF5 1701 aa32.66■■■□□ 2.82
CDKN3-202ENST00000335183 IL6STP40189 918 aaPredicted RBP32.66■■■□□ 2.82
CDKN3-202ENST00000335183 KCNQ3O43525 872 aa32.65■■■□□ 2.82
CDKN3-202ENST00000335183 A1BGP04217 495 aa32.65■■■□□ 2.82
CDKN3-202ENST00000335183 NUDCQ9Y266 331 aa32.65■■■□□ 2.82
CDKN3-202ENST00000335183 COL11A2P13942 1736 aaPredicted RBP32.64■■■□□ 2.82
CDKN3-202ENST00000335183 BCORQ6W2J9 1755 aa32.63■■■□□ 2.81
CDKN3-202ENST00000335183 LMNB1P20700 586 aa32.63■■■□□ 2.81
CDKN3-202ENST00000335183 CCDC24Q8N4L8 307 aa32.63■■■□□ 2.81
CDKN3-202ENST00000335183 CACNA1SQ13698 1873 aa32.63■■■□□ 2.81
CDKN3-202ENST00000335183 ZNF622Q969S3 477 aaKnown RBP eCLIP32.62■■■□□ 2.81
CDKN3-202ENST00000335183 ZC3H4Q9UPT8 1303 aaKnown RBP32.61■■■□□ 2.81
CDKN3-202ENST00000335183 U2AF1L5P0DN76 240 aaPredicted RBP32.61■■■□□ 2.81
CDKN3-202ENST00000335183 PRELPP51888 382 aa32.61■■■□□ 2.81
CDKN3-202ENST00000335183 U2AF1Q01081 240 aaKnown RBP eCLIP32.61■■■□□ 2.81
CDKN3-202ENST00000335183 PRR5LQ6MZQ0 368 aa32.61■■■□□ 2.81
CDKN3-202ENST00000335183 PDE6BP35913 854 aa32.6■■■□□ 2.81
CDKN3-202ENST00000335183 FSTL1Q12841 308 aa32.6■■■□□ 2.81
CDKN3-202ENST00000335183 NPHP1O15259 732 aa32.59■■■□□ 2.81
CDKN3-202ENST00000335183 PPP2R1AP30153 589 aa32.59■■■□□ 2.81
CDKN3-202ENST00000335183 DNAJC5GQ8N7S2 189 aa32.59■■■□□ 2.81
CDKN3-202ENST00000335183 RTF1Q92541 710 aaKnown RBP32.59■■■□□ 2.81
CDKN3-202ENST00000335183 BRIP1Q9BX63 1249 aa32.59■■■□□ 2.81
CDKN3-202ENST00000335183 ZNF219Q9P2Y4 722 aaPredicted RBP32.59■■■□□ 2.81
CDKN3-202ENST00000335183 CAMTA2O94983 1202 aa32.58■■■□□ 2.81
CDKN3-202ENST00000335183 SETDB2Q96T68 719 aa32.58■■■□□ 2.81
CDKN3-202ENST00000335183 USP16Q9Y5T5 823 aa32.58■■■□□ 2.81
CDKN3-202ENST00000335183 NFKBIEO00221 500 aa32.57■■■□□ 2.8
CDKN3-202ENST00000335183 PIP4K2AP48426 406 aaPredicted RBP32.57■■■□□ 2.8
CDKN3-202ENST00000335183 MCM10Q7L590 875 aa32.57■■■□□ 2.8
CDKN3-202ENST00000335183 DZIP3Q86Y13 1208 aaKnown RBP32.57■■■□□ 2.8
CDKN3-202ENST00000335183 PDZRN3Q9UPQ7 1066 aa32.57■■■□□ 2.8
CDKN3-202ENST00000335183 HTRA3P83110 453 aa32.56■■■□□ 2.8
CDKN3-202ENST00000335183 FER1L6Q2WGJ9 1857 aa32.56■■■□□ 2.8
CDKN3-202ENST00000335183 DICER1Q9UPY3 1922 aaKnown RBP32.55■■■□□ 2.8
CDKN3-202ENST00000335183 GLTPD2A6NH11 291 aa32.55■■■□□ 2.8
CDKN3-202ENST00000335183 CNBD1Q8NA66 436 aa32.55■■■□□ 2.8
CDKN3-202ENST00000335183 PRAMEF22A3QJZ6 481 aa32.54■■■□□ 2.8
CDKN3-202ENST00000335183 C21orf2O43822 256 aa32.54■■■□□ 2.8
CDKN3-202ENST00000335183 ST5P78524 1137 aa32.52■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms