RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 HNRNPMP52272 730 aaKnown RBP eCLIP6.37□□□□□ -1.39
PTPRB-202ENST00000334414 KIF4BQ2VIQ3 1234 aa6.37□□□□□ -1.39
PTPRB-202ENST00000334414 BLOC1S2Q6QNY1 142 aa6.37□□□□□ -1.39
PTPRB-202ENST00000334414 AMPD3Q01432 767 aa6.37□□□□□ -1.39
PTPRB-202ENST00000334414 SETDB1Q15047 1291 aa6.37□□□□□ -1.39
PTPRB-202ENST00000334414 WASHC4Q2M389 1173 aa6.37□□□□□ -1.39
PTPRB-202ENST00000334414 FOXD1Q16676 465 aa6.37□□□□□ -1.39
PTPRB-202ENST00000334414 STIM2Q9P246 746 aa6.37□□□□□ -1.39
PTPRB-202ENST00000334414 USP25Q9UHP3 1055 aa6.37□□□□□ -1.39
PTPRB-202ENST00000334414 KIAA1107Q9UPP5 1409 aa6.37□□□□□ -1.39
PTPRB-202ENST00000334414 FSD2A1L4K1 749 aa6.37□□□□□ -1.39
PTPRB-202ENST00000334414 CTAGE15A4D2H0 777 aa6.37□□□□□ -1.39
PTPRB-202ENST00000334414 CTAGE8P0CG41 777 aa6.37□□□□□ -1.39
PTPRB-202ENST00000334414 SKIDA1Q1XH10 827 aa6.37□□□□□ -1.39
PTPRB-202ENST00000334414 CTAGE6Q86UF2 777 aa6.37□□□□□ -1.39
PTPRB-202ENST00000334414 CTAGE4Q8IX94 777 aa6.37□□□□□ -1.39
PTPRB-202ENST00000334414 ANAPC4Q9UJX5 808 aa6.37□□□□□ -1.39
PTPRB-202ENST00000334414 C16orf45Q96MC5 204 aaPredicted RBP6.37□□□□□ -1.39
PTPRB-202ENST00000334414 SAMD15Q9P1V8 674 aa6.37□□□□□ -1.39
PTPRB-202ENST00000334414 SLU7O95391 586 aaKnown RBP6.37□□□□□ -1.39
PTPRB-202ENST00000334414 CCDC178Q5BJE1 867 aa6.37□□□□□ -1.39
PTPRB-202ENST00000334414 MYCBPQ99417 103 aaPredicted RBP6.37□□□□□ -1.39
PTPRB-202ENST00000334414 TSPYL4Q9UJ04 414 aa6.37□□□□□ -1.39
PTPRB-202ENST00000334414 FAM184BQ9ULE4 1060 aa6.37□□□□□ -1.39
PTPRB-202ENST00000334414 TOP2BQ02880 1626 aa6.37□□□□□ -1.39
PTPRB-202ENST00000334414 ADCY5O95622 1261 aa6.37□□□□□ -1.39
PTPRB-202ENST00000334414 CCDC129Q6ZRS4 1044 aa6.37□□□□□ -1.39
PTPRB-202ENST00000334414 CNKSR2Q8WXI2 1034 aa6.37□□□□□ -1.39
PTPRB-202ENST00000334414 PPFIA3O75145 1194 aa6.37□□□□□ -1.39
PTPRB-202ENST00000334414 CACNA2D3Q8IZS8 1091 aa6.37□□□□□ -1.39
PTPRB-202ENST00000334414 JAKMIP2Q96AA8 810 aa6.37□□□□□ -1.39
PTPRB-202ENST00000334414 LRRC45Q96CN5 670 aa6.37□□□□□ -1.39
PTPRB-202ENST00000334414 BCL11BQ9C0K0 894 aaPredicted RBP6.36□□□□□ -1.39
PTPRB-202ENST00000334414 IKBKGQ9Y6K9 419 aa6.36□□□□□ -1.39
PTPRB-202ENST00000334414 SOX12O15370 315 aa6.36□□□□□ -1.39
PTPRB-202ENST00000334414 LACTBP83111 547 aaPredicted RBP6.36□□□□□ -1.39
PTPRB-202ENST00000334414 KIF14Q15058 1648 aa6.36□□□□□ -1.39
PTPRB-202ENST00000334414 VCX3BQ9H321 246 aa6.36□□□□□ -1.39
PTPRB-202ENST00000334414 KIF21AQ7Z4S6 1674 aa6.36□□□□□ -1.39
PTPRB-202ENST00000334414 CETN1Q12798 172 aa6.36□□□□□ -1.39
PTPRB-202ENST00000334414 NEBLO76041 1014 aa6.36□□□□□ -1.39
PTPRB-202ENST00000334414 CAPN2P17655 700 aa6.36□□□□□ -1.39
PTPRB-202ENST00000334414 CNGA1P29973 690 aa6.36□□□□□ -1.39
PTPRB-202ENST00000334414 SPAG1Q07617 926 aa6.36□□□□□ -1.39
PTPRB-202ENST00000334414 HDXQ7Z353 690 aa6.36□□□□□ -1.39
PTPRB-202ENST00000334414 TRIM7Q9C029 511 aa6.36□□□□□ -1.39
PTPRB-202ENST00000334414 ZKSCAN5Q9Y2L8 839 aa6.36□□□□□ -1.39
PTPRB-202ENST00000334414 RABGAP1Q9Y3P9 1069 aa6.36□□□□□ -1.39
PTPRB-202ENST00000334414 VAV2P52735 878 aa6.36□□□□□ -1.39
PTPRB-202ENST00000334414 ANAPC15P60006 121 aa6.36□□□□□ -1.39
PTPRB-202ENST00000334414 TTC39AQ5SRH9 613 aa6.36□□□□□ -1.39
PTPRB-202ENST00000334414 FAM76AQ8TAV0 307 aa6.36□□□□□ -1.39
PTPRB-202ENST00000334414 FAM200AQ8TCP9 573 aa6.36□□□□□ -1.39
PTPRB-202ENST00000334414 CCDC77Q9BR77 488 aa6.36□□□□□ -1.39
PTPRB-202ENST00000334414 HMG20BQ9P0W2 317 aa6.36□□□□□ -1.39
PTPRB-202ENST00000334414 CASTP20810 708 aaKnown RBP6.36□□□□□ -1.39
PTPRB-202ENST00000334414 SOGA3Q5TF21 947 aa6.36□□□□□ -1.39
PTPRB-202ENST00000334414 MAATS1Q7Z4T9 603 aa6.36□□□□□ -1.39
PTPRB-202ENST00000334414 BUB1BO60566 1050 aaPredicted RBP6.36□□□□□ -1.39
PTPRB-202ENST00000334414 MAP4K4O95819 1239 aaPredicted RBP6.36□□□□□ -1.39
PTPRB-202ENST00000334414 C10orf67Q8IYJ2 551 aa6.36□□□□□ -1.39
PTPRB-202ENST00000334414 ARHGAP5Q13017 1502 aa6.36□□□□□ -1.39
PTPRB-202ENST00000334414 STMN1P16949 149 aa6.35□□□□□ -1.39
PTPRB-202ENST00000334414 ATP2A1O14983 1001 aa6.35□□□□□ -1.39
PTPRB-202ENST00000334414 URI1O94763 535 aaPredicted RBP6.35□□□□□ -1.39
PTPRB-202ENST00000334414 PPFIBP2Q8ND30 876 aa6.35□□□□□ -1.39
PTPRB-202ENST00000334414 U3KPZ7 1027 aaPredicted RBP6.35□□□□□ -1.39
PTPRB-202ENST00000334414 IRX4P78413 519 aa6.35□□□□□ -1.39
PTPRB-202ENST00000334414 LMBR1Q8WVP7 490 aa6.35□□□□□ -1.39
PTPRB-202ENST00000334414 TACO1Q9BSH4 297 aaKnown RBP6.35□□□□□ -1.39
PTPRB-202ENST00000334414 AQRO60306 1485 aaKnown RBP eCLIP6.35□□□□□ -1.39
PTPRB-202ENST00000334414 IPO4Q8TEX9 1081 aaKnown RBP6.35□□□□□ -1.39
PTPRB-202ENST00000334414 GSTTP1A0A1W2PQM5 241 aa6.35□□□□□ -1.39
PTPRB-202ENST00000334414 FAM177A1Q8N128 213 aaPredicted RBP6.35□□□□□ -1.39
PTPRB-202ENST00000334414 CCDC12Q8WUD4 166 aaPredicted RBP6.35□□□□□ -1.39
PTPRB-202ENST00000334414 IQCGQ9H095 443 aaKnown RBP6.35□□□□□ -1.39
PTPRB-202ENST00000334414 SUDS3Q9H7L9 328 aaPredicted RBP6.35□□□□□ -1.39
PTPRB-202ENST00000334414 STXBP4Q6ZWJ1 553 aa6.35□□□□□ -1.39
PTPRB-202ENST00000334414 SELENOOQ9BVL4 669 aa6.35□□□□□ -1.39
PTPRB-202ENST00000334414 GOPCQ9HD26 462 aa6.35□□□□□ -1.39
PTPRB-202ENST00000334414 ZHX1Q9UKY1 873 aaPredicted RBP6.35□□□□□ -1.39
PTPRB-202ENST00000334414 RAD50Q92878 1312 aa6.35□□□□□ -1.39
PTPRB-202ENST00000334414 KRT83P78385 493 aa6.35□□□□□ -1.39
PTPRB-202ENST00000334414 ATL3Q6DD88 541 aa6.35□□□□□ -1.39
PTPRB-202ENST00000334414 CACNA2D4Q7Z3S7 1137 aa6.35□□□□□ -1.39
PTPRB-202ENST00000334414 USP37Q86T82 979 aa6.35□□□□□ -1.39
PTPRB-202ENST00000334414 PRDM10Q9NQV6 1147 aa6.35□□□□□ -1.39
PTPRB-202ENST00000334414 KIF6Q6ZMV9 814 aa6.35□□□□□ -1.39
PTPRB-202ENST00000334414 ZSCAN23Q3MJ62 389 aa6.35□□□□□ -1.39
PTPRB-202ENST00000334414 WDR97A6NE52 1622 aa6.34□□□□□ -1.39
PTPRB-202ENST00000334414 PTPN23Q9H3S7 1636 aa6.34□□□□□ -1.39
PTPRB-202ENST00000334414 ATP2A2P16615 1042 aaKnown RBP6.34□□□□□ -1.39
PTPRB-202ENST00000334414 NOLC1Q14978 699 aaKnown RBP eCLIP6.34□□□□□ -1.39
PTPRB-202ENST00000334414 BMP2KLQ5H9B9 411 aa6.34□□□□□ -1.39
PTPRB-202ENST00000334414 IQCDQ96DY2 449 aa6.34□□□□□ -1.39
PTPRB-202ENST00000334414 JADE2Q9NQC1 790 aa6.34□□□□□ -1.39
PTPRB-202ENST00000334414 LARP1Q6PKG0 1096 aaKnown RBP6.34□□□□□ -1.39
PTPRB-202ENST00000334414 TNPO1Q92973 898 aaKnown RBP6.34□□□□□ -1.39
PTPRB-202ENST00000334414 TRPC3Q13507 836 aa6.34□□□□□ -1.39
PTPRB-202ENST00000334414 KIAA0753Q2KHM9 967 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms