RNA–Protein interactions for RNA: ENST00000333256.10

TSSC4-201, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TSSC4, Length 1,686 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-201ENST00000333256 ANXA1P04083 346 aa24.05■■□□□ 1.44
TSSC4-201ENST00000333256 CRKLP46109 303 aaKnown RBP24.05■■□□□ 1.44
TSSC4-201ENST00000333256 CHPF2Q9P2E5 772 aa24.05■■□□□ 1.44
TSSC4-201ENST00000333256 SOS1Q07889 1333 aaPredicted RBP24.04■■□□□ 1.44
TSSC4-201ENST00000333256 CT47B1P0C2W7 299 aaPredicted RBP24.03■■□□□ 1.44
TSSC4-201ENST00000333256 PROSER3Q2NL68 480 aa24.03■■□□□ 1.44
TSSC4-201ENST00000333256 CCDC30Q5VVM6 783 aa24.03■■□□□ 1.44
TSSC4-201ENST00000333256 ZNF831Q5JPB2 1677 aa24.03■■□□□ 1.44
TSSC4-201ENST00000333256 MYL6BP14649 208 aa24.02■■□□□ 1.44
TSSC4-201ENST00000333256 CANXP27824 592 aaKnown RBP24.02■■□□□ 1.44
TSSC4-201ENST00000333256 INTS5Q6P9B9 1019 aaKnown RBP24.02■■□□□ 1.44
TSSC4-201ENST00000333256 SSH1Q8WYL5 1049 aa24.02■■□□□ 1.44
TSSC4-201ENST00000333256 ZBTB1Q9Y2K1 713 aa24.02■■□□□ 1.44
TSSC4-201ENST00000333256 LAMB4A4D0S4 1761 aa24.02■■□□□ 1.44
TSSC4-201ENST00000333256 RGPD3A6NKT7 1758 aaPredicted RBP24.02■■□□□ 1.44
TSSC4-201ENST00000333256 RGPD4Q7Z3J3 1758 aa24.02■■□□□ 1.44
TSSC4-201ENST00000333256 NBPF26B4DH59 902 aa24.02■■□□□ 1.44
TSSC4-201ENST00000333256 RARSP54136 660 aaKnown RBP24.02■■□□□ 1.44
TSSC4-201ENST00000333256 PDIA6Q15084 440 aa24.02■■□□□ 1.44
TSSC4-201ENST00000333256 NBPF14Q5TI25 921 aa24.02■■□□□ 1.44
TSSC4-201ENST00000333256 NBPF10Q6P3W6 841 aaKnown RBP24.02■■□□□ 1.44
TSSC4-201ENST00000333256 NBPF15Q8N660 670 aa24.02■■□□□ 1.44
TSSC4-201ENST00000333256 CCDC87Q9NVE4 849 aa24.02■■□□□ 1.44
TSSC4-201ENST00000333256 CICQ96RK0 1608 aaPredicted RBP24.02■■□□□ 1.43
TSSC4-201ENST00000333256 SMIM5Q71RC9 77 aa24.01■■□□□ 1.43
TSSC4-201ENST00000333256 ZNF330Q9Y3S2 320 aaPredicted RBP24.01■■□□□ 1.43
TSSC4-201ENST00000333256 COL5A3P25940 1745 aaPredicted RBP24■■□□□ 1.43
TSSC4-201ENST00000333256 SLC4A2P04920 1241 aa24■■□□□ 1.43
TSSC4-201ENST00000333256 STK31Q9BXU1 1019 aa24■■□□□ 1.43
TSSC4-201ENST00000333256 SMC4Q9NTJ3 1288 aa24■■□□□ 1.43
TSSC4-201ENST00000333256 BCAR3O75815 825 aa23.99■■□□□ 1.43
TSSC4-201ENST00000333256 DBF4Q9UBU7 674 aaPredicted RBP23.99■■□□□ 1.43
TSSC4-201ENST00000333256 RCAN3Q9UKA8 241 aa23.99■■□□□ 1.43
TSSC4-201ENST00000333256 TAF1LQ8IZX4 1826 aa23.99■■□□□ 1.43
TSSC4-201ENST00000333256 CNTNAP4Q9C0A0 1308 aa23.98■■□□□ 1.43
TSSC4-201ENST00000333256 C4BP0C0L5 1744 aa23.98■■□□□ 1.43
TSSC4-201ENST00000333256 GNPATO15228 680 aa23.98■■□□□ 1.43
TSSC4-201ENST00000333256 AMIGO3Q86WK7 504 aa23.98■■□□□ 1.43
TSSC4-201ENST00000333256 ZNF428Q96B54 188 aa23.98■■□□□ 1.43
TSSC4-201ENST00000333256 AK7Q96M32 723 aa23.98■■□□□ 1.43
TSSC4-201ENST00000333256 DDX21Q9NR30 783 aaKnown RBP eCLIP23.98■■□□□ 1.43
TSSC4-201ENST00000333256 ZNF827Q17R98 1081 aa23.97■■□□□ 1.43
TSSC4-201ENST00000333256 PHAXQ9H814 394 aaKnown RBP23.97■■□□□ 1.43
TSSC4-201ENST00000333256 ALDH1L2Q3SY69 923 aa23.96■■□□□ 1.43
TSSC4-201ENST00000333256 G2E3Q7L622 706 aa23.96■■□□□ 1.43
TSSC4-201ENST00000333256 CHMP4AQ9BY43 222 aa23.96■■□□□ 1.43
TSSC4-201ENST00000333256 ANO8Q9HCE9 1232 aaPredicted RBP23.96■■□□□ 1.43
TSSC4-201ENST00000333256 MYH14Q7Z406 1995 aaKnown RBP23.96■■□□□ 1.43
TSSC4-201ENST00000333256 RC3H1Q5TC82 1133 aaKnown RBP23.95■■□□□ 1.43
TSSC4-201ENST00000333256 MRPL50Q8N5N7 158 aaKnown RBP23.95■■□□□ 1.43
TSSC4-201ENST00000333256 ERBB4Q15303 1308 aa23.95■■□□□ 1.42
TSSC4-201ENST00000333256 RREB1Q92766 1687 aa23.95■■□□□ 1.42
TSSC4-201ENST00000333256 AIMP1Q12904 312 aaKnown RBP23.95■■□□□ 1.42
TSSC4-201ENST00000333256 LRP10Q7Z4F1 713 aa23.95■■□□□ 1.42
TSSC4-201ENST00000333256 PHF14O94880 888 aa23.94■■□□□ 1.42
TSSC4-201ENST00000333256 AKT1S1Q96B36 256 aa23.94■■□□□ 1.42
TSSC4-201ENST00000333256 ARXQ96QS3 562 aa23.93■■□□□ 1.42
TSSC4-201ENST00000333256 HYPKQ9NX55 129 aa23.93■■□□□ 1.42
TSSC4-201ENST00000333256 RPS6KA4O75676 772 aa23.92■■□□□ 1.42
TSSC4-201ENST00000333256 CENPBP07199 599 aaPredicted RBP23.92■■□□□ 1.42
TSSC4-201ENST00000333256 IL6STP40189 918 aaPredicted RBP23.92■■□□□ 1.42
TSSC4-201ENST00000333256 XAGE3Q8WTP9 111 aa23.92■■□□□ 1.42
TSSC4-201ENST00000333256 TFCP2L1Q9NZI6 479 aa23.92■■□□□ 1.42
TSSC4-201ENST00000333256 RTCBQ9Y3I0 505 aaKnown RBP23.92■■□□□ 1.42
TSSC4-201ENST00000333256 NUP188Q5SRE5 1749 aa23.92■■□□□ 1.42
TSSC4-201ENST00000333256 EIF5P55010 431 aaKnown RBP23.92■■□□□ 1.42
TSSC4-201ENST00000333256 COPS6Q7L5N1 327 aa23.92■■□□□ 1.42
TSSC4-201ENST00000333256 FRAT1Q92837 279 aaPredicted RBP23.91■■□□□ 1.42
TSSC4-201ENST00000333256 FLIIQ13045 1269 aa23.9■■□□□ 1.42
TSSC4-201ENST00000333256 TTLL7Q6ZT98 887 aa23.9■■□□□ 1.42
TSSC4-201ENST00000333256 NPM2Q86SE8 214 aaKnown RBP23.9■■□□□ 1.42
TSSC4-201ENST00000333256 COL15A1P39059 1388 aa23.9■■□□□ 1.42
TSSC4-201ENST00000333256 STK32BQ9NY57 414 aa23.89■■□□□ 1.42
TSSC4-201ENST00000333256 NOB1Q9ULX3 412 aaKnown RBP23.89■■□□□ 1.42
TSSC4-201ENST00000333256 TBC1D2BQ9UPU7 963 aa23.89■■□□□ 1.42
TSSC4-201ENST00000333256 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.89■■□□□ 1.41
TSSC4-201ENST00000333256 SLC15A2Q16348 729 aa23.89■■□□□ 1.41
TSSC4-201ENST00000333256 HMGB2P26583 209 aaKnown RBP23.88■■□□□ 1.41
TSSC4-201ENST00000333256 FKBP5Q13451 457 aaPredicted RBP23.87■■□□□ 1.41
TSSC4-201ENST00000333256 PLIN1O60240 522 aa23.86■■□□□ 1.41
TSSC4-201ENST00000333256 DZIP3Q86Y13 1208 aaKnown RBP23.86■■□□□ 1.41
TSSC4-201ENST00000333256 ARHGEF1Q92888 912 aaKnown RBP23.86■■□□□ 1.41
TSSC4-201ENST00000333256 ZBTB3Q9H5J0 574 aa23.86■■□□□ 1.41
TSSC4-201ENST00000333256 KIF16BQ96L93 1317 aa23.86■■□□□ 1.41
TSSC4-201ENST00000333256 BRPF1P55201 1214 aaPredicted RBP23.86■■□□□ 1.41
TSSC4-201ENST00000333256 TRAPPC3LQ5T215 181 aa23.86■■□□□ 1.41
TSSC4-201ENST00000333256 SSFA2P28290 1259 aa23.85■■□□□ 1.41
TSSC4-201ENST00000333256 TNNQ9UQP3 1299 aa23.85■■□□□ 1.41
TSSC4-201ENST00000333256 UBR3Q6ZT12 1888 aa23.85■■□□□ 1.41
TSSC4-201ENST00000333256 PNPLA7Q6ZV29 1317 aa23.84■■□□□ 1.41
TSSC4-201ENST00000333256 SRP68Q9UHB9 627 aaKnown RBP23.84■■□□□ 1.41
TSSC4-201ENST00000333256 SUPT16HQ9Y5B9 1047 aaKnown RBP23.84■■□□□ 1.41
TSSC4-201ENST00000333256 PI4KAP2A4QPH2 592 aa23.83■■□□□ 1.41
TSSC4-201ENST00000333256 F6X3S4 739 aa23.83■■□□□ 1.41
TSSC4-201ENST00000333256 MSH5O43196 834 aa23.83■■□□□ 1.41
TSSC4-201ENST00000333256 KIF6Q6ZMV9 814 aa23.83■■□□□ 1.41
TSSC4-201ENST00000333256 PI4KAP1Q8N8J0 262 aa23.83■■□□□ 1.41
TSSC4-201ENST00000333256 RFC4P35249 363 aa23.83■■□□□ 1.4
TSSC4-201ENST00000333256 ANKRD13DQ6ZTN6 518 aa23.83■■□□□ 1.4
TSSC4-201ENST00000333256 COL23A1Q86Y22 540 aaPredicted RBP23.83■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms