RNA–Protein interactions for RNA: ENST00000332814.6

C11orf88-201, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS P4 TSL 5 BASIC

Gene C11orf88, Length 795 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-201ENST00000332814 CALD1Q05682 793 aaKnown RBP21.42■■□□□ 1.02
C11orf88-201ENST00000332814 INTS5Q6P9B9 1019 aaKnown RBP21.42■■□□□ 1.02
C11orf88-201ENST00000332814 TRIM35Q9UPQ4 493 aa21.42■■□□□ 1.02
C11orf88-201ENST00000332814 ZBTB1Q9Y2K1 713 aa21.42■■□□□ 1.02
C11orf88-201ENST00000332814 LAS1LQ9Y4W2 734 aaKnown RBP21.42■■□□□ 1.02
C11orf88-201ENST00000332814 CANXP27824 592 aaKnown RBP21.41■■□□□ 1.02
C11orf88-201ENST00000332814 PTGER2P43116 358 aa21.41■■□□□ 1.02
C11orf88-201ENST00000332814 ARHGEF1Q92888 912 aaKnown RBP21.41■■□□□ 1.02
C11orf88-201ENST00000332814 BABAM1Q9NWV8 329 aa21.41■■□□□ 1.02
C11orf88-201ENST00000332814 DIEXFQ68CQ4 756 aaKnown RBP21.4■■□□□ 1.02
C11orf88-201ENST00000332814 ARXQ96QS3 562 aa21.4■■□□□ 1.02
C11orf88-201ENST00000332814 ZNF330Q9Y3S2 320 aaPredicted RBP21.4■■□□□ 1.02
C11orf88-201ENST00000332814 KDM3BQ7LBC6 1761 aa21.4■■□□□ 1.02
C11orf88-201ENST00000332814 COL15A1P39059 1388 aa21.39■■□□□ 1.02
C11orf88-201ENST00000332814 SOS1Q07889 1333 aaPredicted RBP21.39■■□□□ 1.01
C11orf88-201ENST00000332814 EIF4A1P60842 406 aaKnown RBP21.38■■□□□ 1.01
C11orf88-201ENST00000332814 KLHL34Q8N239 644 aa21.38■■□□□ 1.01
C11orf88-201ENST00000332814 A0A087WZG4 1122 aa21.37■■□□□ 1.01
C11orf88-201ENST00000332814 ZPR1O75312 459 aa21.37■■□□□ 1.01
C11orf88-201ENST00000332814 SGIP1Q9BQI5 828 aa21.37■■□□□ 1.01
C11orf88-201ENST00000332814 PRAMEF22A3QJZ6 481 aa21.36■■□□□ 1.01
C11orf88-201ENST00000332814 NLGN1Q8N2Q7 840 aa21.36■■□□□ 1.01
C11orf88-201ENST00000332814 USP16Q9Y5T5 823 aa21.36■■□□□ 1.01
C11orf88-201ENST00000332814 MYH14Q7Z406 1995 aaKnown RBP21.36■■□□□ 1.01
C11orf88-201ENST00000332814 SENP3-EIF4A1A0A087X0R7 540 aa21.35■■□□□ 1.01
C11orf88-201ENST00000332814 CCER2I3L3R5 266 aa21.35■■□□□ 1.01
C11orf88-201ENST00000332814 USP42Q9H9J4 1324 aaKnown RBP21.34■■□□□ 1.01
C11orf88-201ENST00000332814 GIGYF1O75420 1035 aaPredicted RBP21.34■■□□□ 1.01
C11orf88-201ENST00000332814 A1BGP04217 495 aa21.34■■□□□ 1.01
C11orf88-201ENST00000332814 IL6STP40189 918 aaPredicted RBP21.34■■□□□ 1.01
C11orf88-201ENST00000332814 CFAP44Q96MT7 982 aa21.34■■□□□ 1.01
C11orf88-201ENST00000332814 C4AP0C0L4 1744 aa21.34■■□□□ 1.01
C11orf88-201ENST00000332814 CHL1O00533 1208 aa21.33■■□□□ 1.01
C11orf88-201ENST00000332814 GNAI1P63096 354 aa21.33■■□□□ 1.01
C11orf88-201ENST00000332814 SRP68Q9UHB9 627 aaKnown RBP21.33■■□□□ 1.01
C11orf88-201ENST00000332814 LAMB4A4D0S4 1761 aa21.33■■□□□ 1
C11orf88-201ENST00000332814 COL24A1Q17RW2 1714 aa21.32■■□□□ 1
C11orf88-201ENST00000332814 GYS1P13807 737 aa21.32■■□□□ 1
C11orf88-201ENST00000332814 EIF5P55010 431 aaKnown RBP21.32■■□□□ 1
C11orf88-201ENST00000332814 CCDC27Q2M243 656 aa21.32■■□□□ 1
C11orf88-201ENST00000332814 FHDC1Q9C0D6 1143 aaPredicted RBP21.32■■□□□ 1
C11orf88-201ENST00000332814 IFT57Q9NWB7 429 aa21.32■■□□□ 1
C11orf88-201ENST00000332814 NARFQ9UHQ1 456 aa21.32■■□□□ 1
C11orf88-201ENST00000332814 USPL1Q5W0Q7 1092 aa21.31■■□□□ 1
C11orf88-201ENST00000332814 SALL2Q9Y467 1007 aaPredicted RBP21.31■■□□□ 1
C11orf88-201ENST00000332814 MMP10P09238 476 aa21.3■■□□□ 1
C11orf88-201ENST00000332814 PIP4K2AP48426 406 aaPredicted RBP21.3■■□□□ 1
C11orf88-201ENST00000332814 NCBP3Q53F19 620 aaKnown RBP21.3■■□□□ 1
C11orf88-201ENST00000332814 MBIPQ9NS73 344 aa21.29■■□□□ 1
C11orf88-201ENST00000332814 PARP3Q9Y6F1 533 aa21.29■■□□□ 1
C11orf88-201ENST00000332814 DCAF8L1A6NGE4 600 aa21.28■■□□□ 1
C11orf88-201ENST00000332814 EIF2S2P20042 333 aaKnown RBP21.28■■□□□ 1
C11orf88-201ENST00000332814 WWC1Q8IX03 1113 aa21.28■■□□□ 1
C11orf88-201ENST00000332814 TBC1D2BQ9UPU7 963 aa21.28■■□□□ 1
C11orf88-201ENST00000332814 FKBP8Q14318 412 aa21.27■■□□□ 1
C11orf88-201ENST00000332814 DZIP3Q86Y13 1208 aaKnown RBP21.27■■□□□ 1
C11orf88-201ENST00000332814 NGEFQ8N5V2 710 aa21.27■■□□□ 1
C11orf88-201ENST00000332814 SYT17Q9BSW7 474 aa21.27■■□□□ 1
C11orf88-201ENST00000332814 ERBB4Q15303 1308 aa21.27■□□□□ 0.99
C11orf88-201ENST00000332814 ZNF853P0CG23 659 aa21.26■□□□□ 0.99
C11orf88-201ENST00000332814 NBPF26B4DH59 902 aa21.24■□□□□ 0.99
C11orf88-201ENST00000332814 HOXB7P09629 217 aa21.24■□□□□ 0.99
C11orf88-201ENST00000332814 MYL6BP14649 208 aa21.24■□□□□ 0.99
C11orf88-201ENST00000332814 NBPF10Q6P3W6 841 aaKnown RBP21.24■□□□□ 0.99
C11orf88-201ENST00000332814 NBPF15Q8N660 670 aa21.24■□□□□ 0.99
C11orf88-201ENST00000332814 ZNF652Q9Y2D9 606 aa21.24■□□□□ 0.99
C11orf88-201ENST00000332814 SCN7AQ01118 1682 aa21.24■□□□□ 0.99
C11orf88-201ENST00000332814 KRT24Q2M2I5 525 aa21.23■□□□□ 0.99
C11orf88-201ENST00000332814 KIF6Q6ZMV9 814 aa21.23■□□□□ 0.99
C11orf88-201ENST00000332814 MIER1Q8N108 512 aa21.23■□□□□ 0.99
C11orf88-201ENST00000332814 NECTIN2Q92692 538 aa21.23■□□□□ 0.99
C11orf88-201ENST00000332814 CD2APQ9Y5K6 639 aa21.23■□□□□ 0.99
C11orf88-201ENST00000332814 IL16Q14005 1332 aa21.23■□□□□ 0.99
C11orf88-201ENST00000332814 HDGFL1Q5TGJ6 251 aa21.22■□□□□ 0.99
C11orf88-201ENST00000332814 DUSP27Q5VZP5 1158 aa21.22■□□□□ 0.99
C11orf88-201ENST00000332814 BICDL1Q6ZP65 573 aa21.22■□□□□ 0.99
C11orf88-201ENST00000332814 WDR63Q8IWG1 891 aa21.22■□□□□ 0.99
C11orf88-201ENST00000332814 CAMTA2O94983 1202 aa21.2■□□□□ 0.98
C11orf88-201ENST00000332814 NFIXQ14938 502 aa21.2■□□□□ 0.98
C11orf88-201ENST00000332814 TSR2Q969E8 191 aaKnown RBP21.2■□□□□ 0.98
C11orf88-201ENST00000332814 CHMP4AQ9BY43 222 aa21.2■□□□□ 0.98
C11orf88-201ENST00000332814 BCL2L12Q9HB09 334 aa21.2■□□□□ 0.98
C11orf88-201ENST00000332814 NPHP1O15259 732 aa21.19■□□□□ 0.98
C11orf88-201ENST00000332814 DDR1Q08345 913 aa21.19■□□□□ 0.98
C11orf88-201ENST00000332814 POLRMTO00411 1230 aaKnown RBP21.18■□□□□ 0.98
C11orf88-201ENST00000332814 ELL2O00472 640 aaPredicted RBP21.18■□□□□ 0.98
C11orf88-201ENST00000332814 TM4SF1P30408 202 aa21.18■□□□□ 0.98
C11orf88-201ENST00000332814 NLGN2Q8NFZ4 835 aa21.18■□□□□ 0.98
C11orf88-201ENST00000332814 BCORQ6W2J9 1755 aa21.18■□□□□ 0.98
C11orf88-201ENST00000332814 TBC1D9BQ66K14 1250 aa21.17■□□□□ 0.98
C11orf88-201ENST00000332814 CLEC4GQ6UXB4 293 aa21.17■□□□□ 0.98
C11orf88-201ENST00000332814 PELP1Q8IZL8 1130 aaKnown RBP21.17■□□□□ 0.98
C11orf88-201ENST00000332814 SETDB2Q96T68 719 aa21.17■□□□□ 0.98
C11orf88-201ENST00000332814 MYH16Q9H6N6 1097 aa21.17■□□□□ 0.98
C11orf88-201ENST00000332814 DBF4Q9UBU7 674 aaPredicted RBP21.17■□□□□ 0.98
C11orf88-201ENST00000332814 CARMIL3Q8ND23 1372 aa21.17■□□□□ 0.98
C11orf88-201ENST00000332814 C10orf71Q711Q0 1435 aa21.17■□□□□ 0.98
C11orf88-201ENST00000332814 SRCAPQ6ZRS2 3230 aa21.17■□□□□ 0.98
C11orf88-201ENST00000332814 RGL2O15211 777 aa21.16■□□□□ 0.98
C11orf88-201ENST00000332814 SERPINB2P05120 415 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms