RNA–Protein interactions for RNA: ENST00000331559.9

MEIS3-201, Transcript of Meis homeobox 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MEIS3, Length 2,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3-201ENST00000331559 SALL3Q9BXA9 1300 aa28.57■■■□□ 2.16
MEIS3-201ENST00000331559 IFNL2Q8IZJ0 200 aa28.57■■■□□ 2.16
MEIS3-201ENST00000331559 CABLES1Q8TDN4 633 aa28.57■■■□□ 2.16
MEIS3-201ENST00000331559 HYPKQ9NX55 129 aa28.57■■■□□ 2.16
MEIS3-201ENST00000331559 KDM6AO15550 1401 aaPredicted RBP28.56■■■□□ 2.16
MEIS3-201ENST00000331559 SLC52A2Q9HAB3 445 aa28.56■■■□□ 2.16
MEIS3-201ENST00000331559 RAB11FIP3O75154 756 aa28.55■■■□□ 2.16
MEIS3-201ENST00000331559 BRINP3Q76B58 766 aa28.55■■■□□ 2.16
MEIS3-201ENST00000331559 POLA2Q14181 598 aa28.55■■■□□ 2.16
MEIS3-201ENST00000331559 ALDH1L1O75891 902 aa28.54■■■□□ 2.16
MEIS3-201ENST00000331559 HDAC5Q9UQL6 1122 aa28.54■■■□□ 2.16
MEIS3-201ENST00000331559 KSR2Q6VAB6 950 aa28.54■■■□□ 2.16
MEIS3-201ENST00000331559 ANXA1P04083 346 aa28.53■■■□□ 2.16
MEIS3-201ENST00000331559 HSP90AB1P08238 724 aaKnown RBP28.53■■■□□ 2.16
MEIS3-201ENST00000331559 ZNF790Q6PG37 636 aa28.53■■■□□ 2.16
MEIS3-201ENST00000331559 MRC1P22897 1456 aa28.53■■■□□ 2.16
MEIS3-201ENST00000331559 PKD1L3Q7Z443 1732 aa28.52■■■□□ 2.16
MEIS3-201ENST00000331559 CD2BP2O95400 341 aaKnown RBP28.52■■■□□ 2.16
MEIS3-201ENST00000331559 MX1P20591 662 aa28.52■■■□□ 2.16
MEIS3-201ENST00000331559 CHRNA2Q15822 529 aa28.52■■■□□ 2.16
MEIS3-201ENST00000331559 AOX1Q06278 1338 aa28.52■■■□□ 2.16
MEIS3-201ENST00000331559 PPP1R42Q7Z4L9 355 aa28.52■■■□□ 2.16
MEIS3-201ENST00000331559 DDX21Q9NR30 783 aaKnown RBP eCLIP28.52■■■□□ 2.16
MEIS3-201ENST00000331559 DDX58O95786 925 aaKnown RBP28.51■■■□□ 2.15
MEIS3-201ENST00000331559 STAP2Q9UGK3 403 aa28.51■■■□□ 2.15
MEIS3-201ENST00000331559 STRCQ7RTU9 1775 aa28.51■■■□□ 2.15
MEIS3-201ENST00000331559 DCAF5Q96JK2 942 aa28.51■■■□□ 2.15
MEIS3-201ENST00000331559 REC8O95072 547 aa28.5■■■□□ 2.15
MEIS3-201ENST00000331559 L1TD1Q5T7N2 865 aaKnown RBP28.5■■■□□ 2.15
MEIS3-201ENST00000331559 USP26Q9BXU7 913 aa28.5■■■□□ 2.15
MEIS3-201ENST00000331559 MAP3K2Q9Y2U5 619 aa28.5■■■□□ 2.15
MEIS3-201ENST00000331559 TRAK2O60296 914 aa28.49■■■□□ 2.15
MEIS3-201ENST00000331559 NBPF7P0C2Y1 421 aaPredicted RBP28.49■■■□□ 2.15
MEIS3-201ENST00000331559 RBM42Q9BTD8 480 aaKnown RBP28.49■■■□□ 2.15
MEIS3-201ENST00000331559 PROSER3Q2NL68 480 aa28.48■■■□□ 2.15
MEIS3-201ENST00000331559 HSP90AB4PQ58FF6 505 aa28.48■■■□□ 2.15
MEIS3-201ENST00000331559 GZF1Q9H116 711 aaPredicted RBP28.48■■■□□ 2.15
MEIS3-201ENST00000331559 SRGAP3O43295 1099 aa28.48■■■□□ 2.15
MEIS3-201ENST00000331559 RABEP1Q15276 862 aa28.47■■■□□ 2.15
MEIS3-201ENST00000331559 SOS2Q07890 1332 aaPredicted RBP28.47■■■□□ 2.15
MEIS3-201ENST00000331559 PRAMEF22A3QJZ6 481 aa28.46■■■□□ 2.15
MEIS3-201ENST00000331559 ERC2O15083 957 aa28.46■■■□□ 2.15
MEIS3-201ENST00000331559 SURF6O75683 361 aaKnown RBP28.46■■■□□ 2.15
MEIS3-201ENST00000331559 MTX1Q13505 466 aa28.46■■■□□ 2.15
MEIS3-201ENST00000331559 CIZ1Q9ULV3 898 aaPredicted RBP28.46■■■□□ 2.15
MEIS3-201ENST00000331559 TUBGCP6Q96RT7 1819 aa28.45■■■□□ 2.15
MEIS3-201ENST00000331559 DDX11L8A8MPP1 907 aa28.45■■■□□ 2.15
MEIS3-201ENST00000331559 K7ELQ4 463 aaPredicted RBP28.45■■■□□ 2.15
MEIS3-201ENST00000331559 NFATC2IPQ8NCF5 419 aa28.45■■■□□ 2.15
MEIS3-201ENST00000331559 KIF1BPQ96EK5 621 aa28.45■■■□□ 2.15
MEIS3-201ENST00000331559 LINS1Q8NG48 757 aa28.45■■■□□ 2.14
MEIS3-201ENST00000331559 TNPO1Q92973 898 aaKnown RBP28.45■■■□□ 2.14
MEIS3-201ENST00000331559 PARP4Q9UKK3 1724 aaKnown RBP28.44■■■□□ 2.14
MEIS3-201ENST00000331559 CYP27B1O15528 508 aa28.44■■■□□ 2.14
MEIS3-201ENST00000331559 SLC39A6Q13433 755 aa28.44■■■□□ 2.14
MEIS3-201ENST00000331559 C9orf78Q9NZ63 289 aaPredicted RBP28.44■■■□□ 2.14
MEIS3-201ENST00000331559 SLAIN2Q9P270 581 aa28.44■■■□□ 2.14
MEIS3-201ENST00000331559 FSD2A1L4K1 749 aa28.43■■■□□ 2.14
MEIS3-201ENST00000331559 RHPN1Q8TCX5 695 aa28.43■■■□□ 2.14
MEIS3-201ENST00000331559 C5P01031 1676 aa28.43■■■□□ 2.14
MEIS3-201ENST00000331559 PDIA6Q15084 440 aa28.43■■■□□ 2.14
MEIS3-201ENST00000331559 TTC5Q8N0Z6 440 aa28.43■■■□□ 2.14
MEIS3-201ENST00000331559 RAB3GAP1Q15042 981 aa28.42■■■□□ 2.14
MEIS3-201ENST00000331559 PRDM11Q9NQV5 511 aa28.42■■■□□ 2.14
MEIS3-201ENST00000331559 FOXD4L1Q9NU39 408 aa28.42■■■□□ 2.14
MEIS3-201ENST00000331559 WDR17Q8IZU2 1322 aa28.42■■■□□ 2.14
MEIS3-201ENST00000331559 GOLGA6L3A6NEY3 463 aa28.42■■■□□ 2.14
MEIS3-201ENST00000331559 HSP90AA1P07900 732 aaKnown RBP28.41■■■□□ 2.14
MEIS3-201ENST00000331559 ARXQ96QS3 562 aa28.4■■■□□ 2.14
MEIS3-201ENST00000331559 UTYO14607 1347 aa28.4■■■□□ 2.14
MEIS3-201ENST00000331559 SNRPA1P09661 255 aaKnown RBP28.4■■■□□ 2.14
MEIS3-201ENST00000331559 ZNF335Q9H4Z2 1342 aaPredicted RBP28.39■■■□□ 2.14
MEIS3-201ENST00000331559 FMNL2Q96PY5 1086 aa28.39■■■□□ 2.14
MEIS3-201ENST00000331559 KDM4FA0A1W2PPD8 638 aa28.39■■■□□ 2.13
MEIS3-201ENST00000331559 TSHZ3Q63HK5 1081 aa28.39■■■□□ 2.13
MEIS3-201ENST00000331559 LARP1Q6PKG0 1096 aaKnown RBP28.39■■■□□ 2.13
MEIS3-201ENST00000331559 ZNF496Q96IT1 587 aaPredicted RBP28.39■■■□□ 2.13
MEIS3-201ENST00000331559 IL1RAPL2Q9NP60 686 aa28.39■■■□□ 2.13
MEIS3-201ENST00000331559 XRCC6P12956 609 aaKnown RBP eCLIP28.38■■■□□ 2.13
MEIS3-201ENST00000331559 CABP4P57796 275 aa28.37■■■□□ 2.13
MEIS3-201ENST00000331559 TRIM6-TRIM34B2RNG4 842 aa28.37■■■□□ 2.13
MEIS3-201ENST00000331559 GRM8O00222 908 aa28.37■■■□□ 2.13
MEIS3-201ENST00000331559 RIC3Q7Z5B4 369 aa28.37■■■□□ 2.13
MEIS3-201ENST00000331559 CWF19L2Q2TBE0 894 aaKnown RBP28.36■■■□□ 2.13
MEIS3-201ENST00000331559 ESYT1Q9BSJ8 1104 aa28.36■■■□□ 2.13
MEIS3-201ENST00000331559 PCDH11XQ9BZA7 1347 aa28.36■■■□□ 2.13
MEIS3-201ENST00000331559 PCDH11YQ9BZA8 1340 aa28.36■■■□□ 2.13
MEIS3-201ENST00000331559 COL5A2P05997 1499 aaPredicted RBP28.36■■■□□ 2.13
MEIS3-201ENST00000331559 NEXNQ0ZGT2 675 aa28.36■■■□□ 2.13
MEIS3-201ENST00000331559 AIMP1Q12904 312 aaKnown RBP28.36■■■□□ 2.13
MEIS3-201ENST00000331559 TOM1L2Q6ZVM7 507 aa28.35■■■□□ 2.13
MEIS3-201ENST00000331559 ERC1Q8IUD2 1116 aa28.35■■■□□ 2.13
MEIS3-201ENST00000331559 FAM43AQ8N2R8 423 aa28.35■■■□□ 2.13
MEIS3-201ENST00000331559 RILPL2Q969X0 211 aa28.35■■■□□ 2.13
MEIS3-201ENST00000331559 GBP4Q96PP9 640 aa28.35■■■□□ 2.13
MEIS3-201ENST00000331559 ABCA3Q99758 1704 aa28.34■■■□□ 2.13
MEIS3-201ENST00000331559 CHMLP26374 656 aa28.34■■■□□ 2.13
MEIS3-201ENST00000331559 OS9Q13438 667 aaPredicted RBP28.33■■■□□ 2.13
MEIS3-201ENST00000331559 NUTM1Q86Y26 1132 aa28.33■■■□□ 2.13
MEIS3-201ENST00000331559 USP42Q9H9J4 1324 aaKnown RBP28.33■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms