RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 DDX54Q8TDD1 881 aaKnown RBP21.14■□□□□ 0.97
DDX41-201ENST00000330503 USP16Q9Y5T5 823 aa21.14■□□□□ 0.97
DDX41-201ENST00000330503 PNMA6EA0A0J9YXQ4 647 aa21.13■□□□□ 0.97
DDX41-201ENST00000330503 SNRPA1P09661 255 aaKnown RBP21.13■□□□□ 0.97
DDX41-201ENST00000330503 UBTFL1P0CB47 393 aaPredicted RBP21.13■□□□□ 0.97
DDX41-201ENST00000330503 PLEKHM2Q8IWE5 1019 aa21.13■□□□□ 0.97
DDX41-201ENST00000330503 FMNL2Q96PY5 1086 aa21.13■□□□□ 0.97
DDX41-201ENST00000330503 MAP3K2Q9Y2U5 619 aa21.13■□□□□ 0.97
DDX41-201ENST00000330503 COL14A1Q05707 1796 aaKnown RBP21.13■□□□□ 0.97
DDX41-201ENST00000330503 SMARCA5O60264 1052 aaPredicted RBP21.13■□□□□ 0.97
DDX41-201ENST00000330503 BMP2KLQ5H9B9 411 aa21.13■□□□□ 0.97
DDX41-201ENST00000330503 USP35Q9P2H5 1018 aa21.12■□□□□ 0.97
DDX41-201ENST00000330503 COL16A1Q07092 1604 aaPredicted RBP21.11■□□□□ 0.97
DDX41-201ENST00000330503 NBPF7P0C2Y1 421 aaPredicted RBP21.11■□□□□ 0.97
DDX41-201ENST00000330503 LRP10Q7Z4F1 713 aa21.1■□□□□ 0.97
DDX41-201ENST00000330503 DDRGK1Q96HY6 314 aa21.1■□□□□ 0.97
DDX41-201ENST00000330503 GLI3P10071 1580 aa21.1■□□□□ 0.97
DDX41-201ENST00000330503 APBB1O00213 710 aa21.1■□□□□ 0.97
DDX41-201ENST00000330503 OTUD7AQ8TE49 926 aaPredicted RBP21.1■□□□□ 0.97
DDX41-201ENST00000330503 AIMP1Q12904 312 aaKnown RBP21.09■□□□□ 0.97
DDX41-201ENST00000330503 ALDH1L1O75891 902 aa21.08■□□□□ 0.97
DDX41-201ENST00000330503 MYL6BP14649 208 aa21.08■□□□□ 0.97
DDX41-201ENST00000330503 SSH3Q8TE77 659 aa21.08■□□□□ 0.96
DDX41-201ENST00000330503 EXOC6BQ9Y2D4 811 aa21.07■□□□□ 0.96
DDX41-201ENST00000330503 DDX58O95786 925 aaKnown RBP21.07■□□□□ 0.96
DDX41-201ENST00000330503 ERICH6Q7L0X2 663 aa21.07■□□□□ 0.96
DDX41-201ENST00000330503 XAGE3Q8WTP9 111 aa21.07■□□□□ 0.96
DDX41-201ENST00000330503 DISP2A7MBM2 1401 aa21.07■□□□□ 0.96
DDX41-201ENST00000330503 PHLPP1O60346 1717 aa21.06■□□□□ 0.96
DDX41-201ENST00000330503 POLA2Q14181 598 aa21.06■□□□□ 0.96
DDX41-201ENST00000330503 COPS6Q7L5N1 327 aa21.06■□□□□ 0.96
DDX41-201ENST00000330503 TBC1D32Q96NH3 1257 aa21.06■□□□□ 0.96
DDX41-201ENST00000330503 BCL11AQ9H165 835 aa21.06■□□□□ 0.96
DDX41-201ENST00000330503 GSPT1P15170 499 aaKnown RBP21.05■□□□□ 0.96
DDX41-201ENST00000330503 PIP4K2AP48426 406 aaPredicted RBP21.05■□□□□ 0.96
DDX41-201ENST00000330503 CWF19L2Q2TBE0 894 aaKnown RBP21.05■□□□□ 0.96
DDX41-201ENST00000330503 PPP1R42Q7Z4L9 355 aa21.05■□□□□ 0.96
DDX41-201ENST00000330503 LINS1Q8NG48 757 aa21.05■□□□□ 0.96
DDX41-201ENST00000330503 ANP32EQ9BTT0 268 aa21.04■□□□□ 0.96
DDX41-201ENST00000330503 UPF2Q9HAU5 1272 aaKnown RBP21.04■□□□□ 0.96
DDX41-201ENST00000330503 UBR2Q8IWV8 1755 aa21.04■□□□□ 0.96
DDX41-201ENST00000330503 KCPQ6ZWJ8 1503 aa21.04■□□□□ 0.96
DDX41-201ENST00000330503 PAPPAQ13219 1627 aa21.04■□□□□ 0.96
DDX41-201ENST00000330503 TOGARAM1Q9Y4F4 1720 aa21.04■□□□□ 0.96
DDX41-201ENST00000330503 IBTKQ9P2D0 1353 aaPredicted RBP21.04■□□□□ 0.96
DDX41-201ENST00000330503 TTC22Q5TAA0 569 aa21.04■□□□□ 0.96
DDX41-201ENST00000330503 IGKV5-2P06315 115 aa21.03■□□□□ 0.96
DDX41-201ENST00000330503 RIC3Q7Z5B4 369 aa21.03■□□□□ 0.96
DDX41-201ENST00000330503 ADAMTS2O95450 1211 aa21.02■□□□□ 0.96
DDX41-201ENST00000330503 MFAP1P55081 439 aaKnown RBP21.02■□□□□ 0.96
DDX41-201ENST00000330503 PIP4K2BP78356 416 aa21.02■□□□□ 0.96
DDX41-201ENST00000330503 LRRCC1Q9C099 1032 aa21.02■□□□□ 0.96
DDX41-201ENST00000330503 C9orf78Q9NZ63 289 aaPredicted RBP21.02■□□□□ 0.96
DDX41-201ENST00000330503 UTYO14607 1347 aa21.02■□□□□ 0.95
DDX41-201ENST00000330503 NBPF26B4DH59 902 aa21.01■□□□□ 0.95
DDX41-201ENST00000330503 TOM1O60784 492 aa21.01■□□□□ 0.95
DDX41-201ENST00000330503 NBPF14Q5TI25 921 aa21.01■□□□□ 0.95
DDX41-201ENST00000330503 TNS2Q63HR2 1409 aa21.01■□□□□ 0.95
DDX41-201ENST00000330503 NBPF10Q6P3W6 841 aaKnown RBP21.01■□□□□ 0.95
DDX41-201ENST00000330503 ANKRD13DQ6ZTN6 518 aa21.01■□□□□ 0.95
DDX41-201ENST00000330503 NBPF15Q8N660 670 aa21.01■□□□□ 0.95
DDX41-201ENST00000330503 METTL22Q9BUU2 404 aaPredicted RBP21.01■□□□□ 0.95
DDX41-201ENST00000330503 LAMB4A4D0S4 1761 aa21.01■□□□□ 0.95
DDX41-201ENST00000330503 SLC4A3P48751 1232 aa21.01■□□□□ 0.95
DDX41-201ENST00000330503 SRGAP3O43295 1099 aa21■□□□□ 0.95
DDX41-201ENST00000330503 PTCD1O75127 700 aaKnown RBP21■□□□□ 0.95
DDX41-201ENST00000330503 TBC1D9Q6ZT07 1266 aa21■□□□□ 0.95
DDX41-201ENST00000330503 OSBPL3Q9H4L5 887 aa21■□□□□ 0.95
DDX41-201ENST00000330503 SALL3Q9BXA9 1300 aa21■□□□□ 0.95
DDX41-201ENST00000330503 MTX1Q13505 466 aa20.99■□□□□ 0.95
DDX41-201ENST00000330503 TMOD3Q9NYL9 352 aa20.99■□□□□ 0.95
DDX41-201ENST00000330503 GRM8O00222 908 aa20.99■□□□□ 0.95
DDX41-201ENST00000330503 PIGBQ92521 554 aa20.99■□□□□ 0.95
DDX41-201ENST00000330503 KAZALD1Q96I82 304 aa20.99■□□□□ 0.95
DDX41-201ENST00000330503 C22orf23Q9BZE7 217 aa20.99■□□□□ 0.95
DDX41-201ENST00000330503 ERBB4Q15303 1308 aa20.99■□□□□ 0.95
DDX41-201ENST00000330503 NEURL1BA8MQ27 555 aa20.98■□□□□ 0.95
DDX41-201ENST00000330503 PDE1AP54750 535 aa20.98■□□□□ 0.95
DDX41-201ENST00000330503 PLCH1Q4KWH8 1693 aa20.98■□□□□ 0.95
DDX41-201ENST00000330503 MYD88Q99836 296 aa20.98■□□□□ 0.95
DDX41-201ENST00000330503 RAB11FIP3O75154 756 aa20.97■□□□□ 0.95
DDX41-201ENST00000330503 SURF6O75683 361 aaKnown RBP20.97■□□□□ 0.95
DDX41-201ENST00000330503 A1BGP04217 495 aa20.97■□□□□ 0.95
DDX41-201ENST00000330503 SUCLG2Q96I99 432 aa20.97■□□□□ 0.95
DDX41-201ENST00000330503 EXOC5O00471 708 aa20.96■□□□□ 0.95
DDX41-201ENST00000330503 CDC45O75419 566 aa20.96■□□□□ 0.95
DDX41-201ENST00000330503 NEXNQ0ZGT2 675 aa20.96■□□□□ 0.95
DDX41-201ENST00000330503 GCKRQ14397 625 aa20.96■□□□□ 0.95
DDX41-201ENST00000330503 ASAP1Q9ULH1 1129 aa20.96■□□□□ 0.95
DDX41-201ENST00000330503 NUTM2BA6NNL0 878 aaPredicted RBP20.96■□□□□ 0.95
DDX41-201ENST00000330503 NUTM2EB1AL46 878 aaPredicted RBP20.96■□□□□ 0.95
DDX41-201ENST00000330503 SDSP20132 328 aa20.96■□□□□ 0.95
DDX41-201ENST00000330503 NUTM2AQ8IVF1 878 aaPredicted RBP20.96■□□□□ 0.95
DDX41-201ENST00000330503 HDAC5Q9UQL6 1122 aa20.96■□□□□ 0.95
DDX41-201ENST00000330503 NRAPQ86VF7 1730 aa20.95■□□□□ 0.94
DDX41-201ENST00000330503 SPATA31A1Q5TZJ5 1347 aa20.95■□□□□ 0.94
DDX41-201ENST00000330503 PLBD2Q8NHP8 589 aa20.95■□□□□ 0.94
DDX41-201ENST00000330503 ATG3Q9NT62 314 aa20.95■□□□□ 0.94
DDX41-201ENST00000330503 STAP2Q9UGK3 403 aa20.94■□□□□ 0.94
DDX41-201ENST00000330503 ITGB4P16144 1822 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms