RNA–Protein interactions for RNA: ENST00000329563.8

TSPO-201, Transcript of translocator protein, humanhuman

APPRIS P1 TSL 3 BASIC

Gene TSPO, Length 955 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-201ENST00000329563 DDR1Q08345 913 aa19.63■□□□□ 0.73
TSPO-201ENST00000329563 VSIG10Q8N0Z9 540 aa19.63■□□□□ 0.73
TSPO-201ENST00000329563 ZNF496Q96IT1 587 aaPredicted RBP19.63■□□□□ 0.73
TSPO-201ENST00000329563 ANP32CO43423 234 aa19.62■□□□□ 0.73
TSPO-201ENST00000329563 KCNQ3O43525 872 aa19.62■□□□□ 0.73
TSPO-201ENST00000329563 ZNF790Q6PG37 636 aa19.62■□□□□ 0.73
TSPO-201ENST00000329563 NUDCQ9Y266 331 aa19.62■□□□□ 0.73
TSPO-201ENST00000329563 BRCA1P38398 1863 aaKnown RBP19.61■□□□□ 0.73
TSPO-201ENST00000329563 FCHSD2O94868 740 aa19.61■□□□□ 0.73
TSPO-201ENST00000329563 TEFQ10587 303 aa19.61■□□□□ 0.73
TSPO-201ENST00000329563 COL15A1P39059 1388 aa19.6■□□□□ 0.73
TSPO-201ENST00000329563 HEG1Q9ULI3 1381 aa19.6■□□□□ 0.73
TSPO-201ENST00000329563 USPL1Q5W0Q7 1092 aa19.6■□□□□ 0.73
TSPO-201ENST00000329563 BCL2L12Q9HB09 334 aa19.6■□□□□ 0.73
TSPO-201ENST00000329563 BCS1LQ9Y276 419 aa19.6■□□□□ 0.73
TSPO-201ENST00000329563 ARFGEF1Q9Y6D6 1849 aa19.6■□□□□ 0.73
TSPO-201ENST00000329563 CEP350Q5VT06 3117 aa19.59■□□□□ 0.73
TSPO-201ENST00000329563 A0A0G2JLW4 131 aa19.59■□□□□ 0.73
TSPO-201ENST00000329563 MCM10Q7L590 875 aa19.59■□□□□ 0.73
TSPO-201ENST00000329563 TTC5Q8N0Z6 440 aa19.59■□□□□ 0.73
TSPO-201ENST00000329563 ZPR1O75312 459 aa19.58■□□□□ 0.72
TSPO-201ENST00000329563 TM4SF1P30408 202 aa19.58■□□□□ 0.72
TSPO-201ENST00000329563 DCTN1Q14203 1278 aa19.58■□□□□ 0.72
TSPO-201ENST00000329563 ZNF526Q8TF50 670 aaPredicted RBP19.58■□□□□ 0.72
TSPO-201ENST00000329563 DLG5Q8TDM6 1919 aa19.58■□□□□ 0.72
TSPO-201ENST00000329563 NRXN2Q9P2S2 1712 aa19.57■□□□□ 0.72
TSPO-201ENST00000329563 POLRMTO00411 1230 aaKnown RBP19.57■□□□□ 0.72
TSPO-201ENST00000329563 KCNA3P22001 575 aa19.57■□□□□ 0.72
TSPO-201ENST00000329563 CANXP27824 592 aaKnown RBP19.57■□□□□ 0.72
TSPO-201ENST00000329563 AFDNP55196 1824 aaKnown RBP19.56■□□□□ 0.72
TSPO-201ENST00000329563 DPEP1P16444 411 aa19.56■□□□□ 0.72
TSPO-201ENST00000329563 RALBP1Q15311 655 aa19.56■□□□□ 0.72
TSPO-201ENST00000329563 NARFQ9UHQ1 456 aa19.56■□□□□ 0.72
TSPO-201ENST00000329563 SCN7AQ01118 1682 aa19.56■□□□□ 0.72
TSPO-201ENST00000329563 PRAMEF22A3QJZ6 481 aa19.55■□□□□ 0.72
TSPO-201ENST00000329563 BTBD11A6QL63 1104 aa19.55■□□□□ 0.72
TSPO-201ENST00000329563 EIF5P55010 431 aaKnown RBP19.55■□□□□ 0.72
TSPO-201ENST00000329563 PLEKHF1Q96S99 279 aa19.55■□□□□ 0.72
TSPO-201ENST00000329563 PIM2Q9P1W9 311 aa19.55■□□□□ 0.72
TSPO-201ENST00000329563 NFIXQ14938 502 aa19.54■□□□□ 0.72
TSPO-201ENST00000329563 ARHGAP27Q6ZUM4 889 aa19.54■□□□□ 0.72
TSPO-201ENST00000329563 FMNL2Q96PY5 1086 aa19.53■□□□□ 0.72
TSPO-201ENST00000329563 PRKRIP1Q9H875 184 aaPredicted RBP19.53■□□□□ 0.72
TSPO-201ENST00000329563 STARD3NLO95772 234 aa19.52■□□□□ 0.72
TSPO-201ENST00000329563 A1BGP04217 495 aa19.52■□□□□ 0.72
TSPO-201ENST00000329563 DALRD3Q5D0E6 543 aaKnown RBP19.51■□□□□ 0.71
TSPO-201ENST00000329563 USP16Q9Y5T5 823 aa19.51■□□□□ 0.71
TSPO-201ENST00000329563 KDM3BQ7LBC6 1761 aa19.5■□□□□ 0.71
TSPO-201ENST00000329563 CARMIL3Q8ND23 1372 aa19.5■□□□□ 0.71
TSPO-201ENST00000329563 HTATSF1O43719 755 aaKnown RBP19.5■□□□□ 0.71
TSPO-201ENST00000329563 HSPA6P17066 643 aa19.5■□□□□ 0.71
TSPO-201ENST00000329563 CHRNA5P30532 468 aa19.5■□□□□ 0.71
TSPO-201ENST00000329563 PIP4K2AP48426 406 aaPredicted RBP19.5■□□□□ 0.71
TSPO-201ENST00000329563 RTF1Q92541 710 aaKnown RBP19.5■□□□□ 0.71
TSPO-201ENST00000329563 BCORQ6W2J9 1755 aa19.49■□□□□ 0.71
TSPO-201ENST00000329563 TEX13AQ9BXU3 409 aaPredicted RBP19.49■□□□□ 0.71
TSPO-201ENST00000329563 MIS18AQ9NYP9 233 aa19.49■□□□□ 0.71
TSPO-201ENST00000329563 A0A087WZG4 1122 aa19.48■□□□□ 0.71
TSPO-201ENST00000329563 IL6STP40189 918 aaPredicted RBP19.48■□□□□ 0.71
TSPO-201ENST00000329563 TBC1D2BQ9UPU7 963 aa19.48■□□□□ 0.71
TSPO-201ENST00000329563 DLEC1Q9Y238 1755 aa19.47■□□□□ 0.71
TSPO-201ENST00000329563 TBC1D9BQ66K14 1250 aa19.47■□□□□ 0.71
TSPO-201ENST00000329563 NPM2Q86SE8 214 aaKnown RBP19.47■□□□□ 0.71
TSPO-201ENST00000329563 THUMPD2Q9BTF0 503 aaKnown RBP19.47■□□□□ 0.71
TSPO-201ENST00000329563 ZNF330Q9Y3S2 320 aaPredicted RBP19.47■□□□□ 0.71
TSPO-201ENST00000329563 ANKRD31Q8N7Z5 1873 aa19.47■□□□□ 0.71
TSPO-201ENST00000329563 KIF3CO14782 793 aa19.46■□□□□ 0.71
TSPO-201ENST00000329563 SERPINB2P05120 415 aa19.46■□□□□ 0.71
TSPO-201ENST00000329563 BICDL1Q6ZP65 573 aa19.46■□□□□ 0.71
TSPO-201ENST00000329563 LAMB4A4D0S4 1761 aa19.46■□□□□ 0.71
TSPO-201ENST00000329563 CAMTA2O94983 1202 aa19.45■□□□□ 0.7
TSPO-201ENST00000329563 TAF7Q15545 349 aaPredicted RBP19.45■□□□□ 0.7
TSPO-201ENST00000329563 NFE2L2Q16236 605 aa19.45■□□□□ 0.7
TSPO-201ENST00000329563 MIER1Q8N108 512 aa19.45■□□□□ 0.7
TSPO-201ENST00000329563 MYBBP1AQ9BQG0 1328 aaKnown RBP19.45■□□□□ 0.7
TSPO-201ENST00000329563 SBF1O95248 1867 aa19.44■□□□□ 0.7
TSPO-201ENST00000329563 NBPF26B4DH59 902 aa19.44■□□□□ 0.7
TSPO-201ENST00000329563 TOMM70O94826 608 aa19.44■□□□□ 0.7
TSPO-201ENST00000329563 SNRPA1P09661 255 aaKnown RBP19.44■□□□□ 0.7
TSPO-201ENST00000329563 C9orf131Q5VYM1 1079 aa19.44■□□□□ 0.7
TSPO-201ENST00000329563 NBPF10Q6P3W6 841 aaKnown RBP19.44■□□□□ 0.7
TSPO-201ENST00000329563 NBPF15Q8N660 670 aa19.44■□□□□ 0.7
TSPO-201ENST00000329563 COL11A2P13942 1736 aaPredicted RBP19.43■□□□□ 0.7
TSPO-201ENST00000329563 C16orf71Q8IYS4 520 aaPredicted RBP19.43■□□□□ 0.7
TSPO-201ENST00000329563 KDM2BQ8NHM5 1336 aa19.43■□□□□ 0.7
TSPO-201ENST00000329563 CCER2I3L3R5 266 aa19.42■□□□□ 0.7
TSPO-201ENST00000329563 DZIP3Q86Y13 1208 aaKnown RBP19.41■□□□□ 0.7
TSPO-201ENST00000329563 CCDC24Q8N4L8 307 aa19.41■□□□□ 0.7
TSPO-201ENST00000329563 RNF181Q9P0P0 153 aa19.41■□□□□ 0.7
TSPO-201ENST00000329563 PDZRN3Q9UPQ7 1066 aa19.41■□□□□ 0.7
TSPO-201ENST00000329563 ZC3H4Q9UPT8 1303 aaKnown RBP19.41■□□□□ 0.7
TSPO-201ENST00000329563 TNRC6CQ9HCJ0 1690 aaKnown RBP19.4■□□□□ 0.7
TSPO-201ENST00000329563 APLP1P51693 650 aa19.4■□□□□ 0.7
TSPO-201ENST00000329563 PRR5LQ6MZQ0 368 aa19.4■□□□□ 0.7
TSPO-201ENST00000329563 H0YIN7 160 aa19.39■□□□□ 0.69
TSPO-201ENST00000329563 NEFMP07197 916 aa19.39■□□□□ 0.69
TSPO-201ENST00000329563 EIF4A1P60842 406 aaKnown RBP19.39■□□□□ 0.69
TSPO-201ENST00000329563 MAPK8IP3Q9UPT6 1336 aa19.39■□□□□ 0.69
TSPO-201ENST00000329563 TTLL6Q8N841 843 aa19.38■□□□□ 0.69
TSPO-201ENST00000329563 C2CD5Q86YS7 1000 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms