RNA–Protein interactions for RNA: ENST00000329151.5

TMEM54-201, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best) BASIC

Gene TMEM54, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-201ENST00000329151 ADAMTS7Q9UKP4 1686 aa31.3■■■□□ 2.6
TMEM54-201ENST00000329151 GNAT3A8MTJ3 354 aa31.3■■■□□ 2.6
TMEM54-201ENST00000329151 NARFQ9UHQ1 456 aa31.28■■■□□ 2.6
TMEM54-201ENST00000329151 ZBTB1Q9Y2K1 713 aa31.28■■■□□ 2.6
TMEM54-201ENST00000329151 POLRMTO00411 1230 aaKnown RBP31.27■■■□□ 2.6
TMEM54-201ENST00000329151 CANXP27824 592 aaKnown RBP31.27■■■□□ 2.6
TMEM54-201ENST00000329151 NPM2Q86SE8 214 aaKnown RBP31.27■■■□□ 2.6
TMEM54-201ENST00000329151 COL3A1P02461 1466 aaPredicted RBP31.27■■■□□ 2.6
TMEM54-201ENST00000329151 UBR2Q8IWV8 1755 aa31.26■■■□□ 2.59
TMEM54-201ENST00000329151 NUDCQ9Y266 331 aa31.26■■■□□ 2.59
TMEM54-201ENST00000329151 A0A087WZG4 1122 aa31.25■■■□□ 2.59
TMEM54-201ENST00000329151 HSPA6P17066 643 aa31.25■■■□□ 2.59
TMEM54-201ENST00000329151 TM4SF1P30408 202 aa31.25■■■□□ 2.59
TMEM54-201ENST00000329151 TEX13AQ9BXU3 409 aaPredicted RBP31.24■■■□□ 2.59
TMEM54-201ENST00000329151 KCNA3P22001 575 aa31.23■■■□□ 2.59
TMEM54-201ENST00000329151 CHRNA5P30532 468 aa31.23■■■□□ 2.59
TMEM54-201ENST00000329151 ZNF330Q9Y3S2 320 aaPredicted RBP31.23■■■□□ 2.59
TMEM54-201ENST00000329151 AFDNP55196 1824 aaKnown RBP31.23■■■□□ 2.59
TMEM54-201ENST00000329151 CEP350Q5VT06 3117 aa31.22■■■□□ 2.59
TMEM54-201ENST00000329151 C9orf131Q5VYM1 1079 aa31.22■■■□□ 2.59
TMEM54-201ENST00000329151 NFIXQ14938 502 aa31.21■■■□□ 2.59
TMEM54-201ENST00000329151 KIF3CO14782 793 aa31.2■■■□□ 2.59
TMEM54-201ENST00000329151 ZNF790Q6PG37 636 aa31.2■■■□□ 2.59
TMEM54-201ENST00000329151 SERPINB2P05120 415 aa31.19■■■□□ 2.58
TMEM54-201ENST00000329151 C16orf71Q8IYS4 520 aaPredicted RBP31.19■■■□□ 2.58
TMEM54-201ENST00000329151 PRKAR2BP31323 418 aa31.18■■■□□ 2.58
TMEM54-201ENST00000329151 BICDL1Q6ZP65 573 aa31.18■■■□□ 2.58
TMEM54-201ENST00000329151 IL17REQ8NFR9 667 aa31.18■■■□□ 2.58
TMEM54-201ENST00000329151 ZNF496Q96IT1 587 aaPredicted RBP31.18■■■□□ 2.58
TMEM54-201ENST00000329151 FMNL2Q96PY5 1086 aa31.18■■■□□ 2.58
TMEM54-201ENST00000329151 HEG1Q9ULI3 1381 aa31.17■■■□□ 2.58
TMEM54-201ENST00000329151 RNF181Q9P0P0 153 aa31.17■■■□□ 2.58
TMEM54-201ENST00000329151 SIPA1L3O60292 1781 aaPredicted RBP31.16■■■□□ 2.58
TMEM54-201ENST00000329151 RTF1Q92541 710 aaKnown RBP31.16■■■□□ 2.58
TMEM54-201ENST00000329151 U2AF1L5P0DN76 240 aaPredicted RBP31.15■■■□□ 2.58
TMEM54-201ENST00000329151 U2AF1Q01081 240 aaKnown RBP eCLIP31.15■■■□□ 2.58
TMEM54-201ENST00000329151 KDM2BQ8NHM5 1336 aa31.15■■■□□ 2.58
TMEM54-201ENST00000329151 BTBD11A6QL63 1104 aa31.14■■■□□ 2.58
TMEM54-201ENST00000329151 NPHP1O15259 732 aa31.14■■■□□ 2.58
TMEM54-201ENST00000329151 TOMM70O94826 608 aa31.14■■■□□ 2.58
TMEM54-201ENST00000329151 EIF5P55010 431 aaKnown RBP31.13■■■□□ 2.57
TMEM54-201ENST00000329151 NRXN2Q9P2S2 1712 aa31.12■■■□□ 2.57
TMEM54-201ENST00000329151 H0YIN7 160 aa31.12■■■□□ 2.57
TMEM54-201ENST00000329151 C2CD5Q86YS7 1000 aa31.12■■■□□ 2.57
TMEM54-201ENST00000329151 NMRK2Q9NPI5 230 aa31.12■■■□□ 2.57
TMEM54-201ENST00000329151 RSPH6AQ9H0K4 717 aa31.11■■■□□ 2.57
TMEM54-201ENST00000329151 BCL2L12Q9HB09 334 aa31.11■■■□□ 2.57
TMEM54-201ENST00000329151 SBF1O95248 1867 aa31.1■■■□□ 2.57
TMEM54-201ENST00000329151 IL6STP40189 918 aaPredicted RBP31.1■■■□□ 2.57
TMEM54-201ENST00000329151 TTLL6Q8N841 843 aa31.1■■■□□ 2.57
TMEM54-201ENST00000329151 PHACTR3Q96KR7 559 aa31.1■■■□□ 2.57
TMEM54-201ENST00000329151 DLEC1Q9Y238 1755 aa31.1■■■□□ 2.57
TMEM54-201ENST00000329151 NEFMP07197 916 aa31.09■■■□□ 2.57
TMEM54-201ENST00000329151 TBC1D2BQ9UPU7 963 aa31.09■■■□□ 2.57
TMEM54-201ENST00000329151 PPP2R1AP30153 589 aa31.08■■■□□ 2.57
TMEM54-201ENST00000329151 CEMIPQ8WUJ3 1361 aa31.07■■■□□ 2.56
TMEM54-201ENST00000329151 SCN7AQ01118 1682 aa31.07■■■□□ 2.56
TMEM54-201ENST00000329151 APLP1P51693 650 aa31.07■■■□□ 2.56
TMEM54-201ENST00000329151 PDZRN3Q9UPQ7 1066 aa31.06■■■□□ 2.56
TMEM54-201ENST00000329151 CARMIL3Q8ND23 1372 aa31.05■■■□□ 2.56
TMEM54-201ENST00000329151 PDE6BP35913 854 aa31.05■■■□□ 2.56
TMEM54-201ENST00000329151 TBC1D9BQ66K14 1250 aa31.05■■■□□ 2.56
TMEM54-201ENST00000329151 A1BGP04217 495 aa31.04■■■□□ 2.56
TMEM54-201ENST00000329151 ZNF622Q969S3 477 aaKnown RBP eCLIP31.04■■■□□ 2.56
TMEM54-201ENST00000329151 SETDB2Q96T68 719 aa31.04■■■□□ 2.56
TMEM54-201ENST00000329151 RASSF7Q02833 373 aa31.03■■■□□ 2.56
TMEM54-201ENST00000329151 LMNB1P20700 586 aa31.02■■■□□ 2.56
TMEM54-201ENST00000329151 RBM46Q8TBY0 533 aaKnown RBP31.02■■■□□ 2.56
TMEM54-201ENST00000329151 TNRC6CQ9HCJ0 1690 aaKnown RBP31.02■■■□□ 2.56
TMEM54-201ENST00000329151 CCDC88AQ3V6T2 1871 aa31.01■■■□□ 2.56
TMEM54-201ENST00000329151 ZC3H4Q9UPT8 1303 aaKnown RBP31.01■■■□□ 2.56
TMEM54-201ENST00000329151 MCM10Q7L590 875 aa31.01■■■□□ 2.55
TMEM54-201ENST00000329151 DZIP3Q86Y13 1208 aaKnown RBP31.01■■■□□ 2.55
TMEM54-201ENST00000329151 BRIP1Q9BX63 1249 aa31.01■■■□□ 2.55
TMEM54-201ENST00000329151 ST5P78524 1137 aa31■■■□□ 2.55
TMEM54-201ENST00000329151 CNBD1Q8NA66 436 aa31■■■□□ 2.55
TMEM54-201ENST00000329151 KCNQ3O43525 872 aa30.99■■■□□ 2.55
TMEM54-201ENST00000329151 SNRPA1P09661 255 aaKnown RBP30.99■■■□□ 2.55
TMEM54-201ENST00000329151 RRAGCQ9HB90 399 aa30.99■■■□□ 2.55
TMEM54-201ENST00000329151 ZNF652Q9Y2D9 606 aa30.99■■■□□ 2.55
TMEM54-201ENST00000329151 ANKRD31Q8N7Z5 1873 aa30.97■■■□□ 2.55
TMEM54-201ENST00000329151 HTATSF1O43719 755 aaKnown RBP30.97■■■□□ 2.55
TMEM54-201ENST00000329151 PRR5LQ6MZQ0 368 aa30.97■■■□□ 2.55
TMEM54-201ENST00000329151 ZNF219Q9P2Y4 722 aaPredicted RBP30.96■■■□□ 2.55
TMEM54-201ENST00000329151 BCORQ6W2J9 1755 aa30.95■■■□□ 2.55
TMEM54-201ENST00000329151 CAMTA2O94983 1202 aa30.95■■■□□ 2.55
TMEM54-201ENST00000329151 FSTL1Q12841 308 aa30.95■■■□□ 2.55
TMEM54-201ENST00000329151 CCDC24Q8N4L8 307 aa30.95■■■□□ 2.55
TMEM54-201ENST00000329151 USP16Q9Y5T5 823 aa30.95■■■□□ 2.55
TMEM54-201ENST00000329151 TIAM2Q8IVF5 1701 aa30.93■■■□□ 2.54
TMEM54-201ENST00000329151 PIP4K2AP48426 406 aaPredicted RBP30.93■■■□□ 2.54
TMEM54-201ENST00000329151 DCTN1Q14203 1278 aa30.93■■■□□ 2.54
TMEM54-201ENST00000329151 CACNA1SQ13698 1873 aa30.93■■■□□ 2.54
TMEM54-201ENST00000329151 NBPF5PQ86XG9 351 aaPredicted RBP30.92■■■□□ 2.54
TMEM54-201ENST00000329151 C21orf2O43822 256 aa30.91■■■□□ 2.54
TMEM54-201ENST00000329151 TAF7Q15545 349 aaPredicted RBP30.91■■■□□ 2.54
TMEM54-201ENST00000329151 CNKSR1Q969H4 720 aa30.91■■■□□ 2.54
TMEM54-201ENST00000329151 COL11A2P13942 1736 aaPredicted RBP30.9■■■□□ 2.54
TMEM54-201ENST00000329151 CLEC4GQ6UXB4 293 aa30.9■■■□□ 2.54
TMEM54-201ENST00000329151 WDR90Q96KV7 1748 aa30.9■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms