RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 ANXA1P04083 346 aa26.29■■□□□ 1.8
LIMS2-201ENST00000324938 DDX11L8A8MPP1 907 aa26.29■■□□□ 1.8
LIMS2-201ENST00000324938 NBPF7P0C2Y1 421 aaPredicted RBP26.29■■□□□ 1.8
LIMS2-201ENST00000324938 C5P01031 1676 aa26.28■■□□□ 1.8
LIMS2-201ENST00000324938 TNPO1Q92973 898 aaKnown RBP26.27■■□□□ 1.8
LIMS2-201ENST00000324938 PLEKHG2Q9H7P9 1386 aa26.26■■□□□ 1.79
LIMS2-201ENST00000324938 TNS3Q68CZ2 1445 aa26.26■■□□□ 1.79
LIMS2-201ENST00000324938 SRGAP3O43295 1099 aa26.25■■□□□ 1.79
LIMS2-201ENST00000324938 RAPGEF4Q8WZA2 1011 aa26.25■■□□□ 1.79
LIMS2-201ENST00000324938 ESYT1Q9BSJ8 1104 aa26.25■■□□□ 1.79
LIMS2-201ENST00000324938 PKD1L3Q7Z443 1732 aa26.25■■□□□ 1.79
LIMS2-201ENST00000324938 KDM6AO15550 1401 aaPredicted RBP26.25■■□□□ 1.79
LIMS2-201ENST00000324938 SURF6O75683 361 aaKnown RBP26.24■■□□□ 1.79
LIMS2-201ENST00000324938 ALDH1L1O75891 902 aa26.24■■□□□ 1.79
LIMS2-201ENST00000324938 PROSER3Q2NL68 480 aa26.24■■□□□ 1.79
LIMS2-201ENST00000324938 MEGF6O75095 1541 aa26.24■■□□□ 1.79
LIMS2-201ENST00000324938 NPHP3Q7Z494 1330 aa26.24■■□□□ 1.79
LIMS2-201ENST00000324938 KSR2Q6VAB6 950 aa26.23■■□□□ 1.79
LIMS2-201ENST00000324938 RHPN1Q8TCX5 695 aa26.23■■□□□ 1.79
LIMS2-201ENST00000324938 IL1RAPL2Q9NP60 686 aa26.23■■□□□ 1.79
LIMS2-201ENST00000324938 FOXD4L1Q9NU39 408 aa26.23■■□□□ 1.79
LIMS2-201ENST00000324938 HYPKQ9NX55 129 aa26.23■■□□□ 1.79
LIMS2-201ENST00000324938 XIRP1Q702N8 1843 aaKnown RBP26.23■■□□□ 1.79
LIMS2-201ENST00000324938 MTX1Q13505 466 aa26.23■■□□□ 1.79
LIMS2-201ENST00000324938 KIF1BPQ96EK5 621 aa26.23■■□□□ 1.79
LIMS2-201ENST00000324938 GBP4Q96PP9 640 aa26.23■■□□□ 1.79
LIMS2-201ENST00000324938 MAP3K2Q9Y2U5 619 aa26.23■■□□□ 1.79
LIMS2-201ENST00000324938 ST18O60284 1047 aa26.22■■□□□ 1.79
LIMS2-201ENST00000324938 TRAK2O60296 914 aa26.22■■□□□ 1.79
LIMS2-201ENST00000324938 CHMLP26374 656 aa26.22■■□□□ 1.79
LIMS2-201ENST00000324938 DDX17Q92841 729 aaKnown RBP26.22■■□□□ 1.79
LIMS2-201ENST00000324938 NLRP2Q9NX02 1062 aa26.22■■□□□ 1.79
LIMS2-201ENST00000324938 PRAMEF22A3QJZ6 481 aa26.21■■□□□ 1.79
LIMS2-201ENST00000324938 TRIM6-TRIM34B2RNG4 842 aa26.21■■□□□ 1.79
LIMS2-201ENST00000324938 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.21■■□□□ 1.79
LIMS2-201ENST00000324938 TATP17735 454 aaPredicted RBP26.21■■□□□ 1.79
LIMS2-201ENST00000324938 HSP90AB4PQ58FF6 505 aa26.21■■□□□ 1.79
LIMS2-201ENST00000324938 CADPS2Q86UW7 1296 aa26.21■■□□□ 1.79
LIMS2-201ENST00000324938 MRC1P22897 1456 aa26.21■■□□□ 1.79
LIMS2-201ENST00000324938 RILPL2Q969X0 211 aa26.2■■□□□ 1.79
LIMS2-201ENST00000324938 SLC52A2Q9HAB3 445 aa26.2■■□□□ 1.78
LIMS2-201ENST00000324938 DDX21Q9NR30 783 aaKnown RBP eCLIP26.2■■□□□ 1.78
LIMS2-201ENST00000324938 SPG7Q9UQ90 795 aa26.2■■□□□ 1.78
LIMS2-201ENST00000324938 PHKG2P15735 406 aa26.19■■□□□ 1.78
LIMS2-201ENST00000324938 NUTM1Q86Y26 1132 aa26.18■■□□□ 1.78
LIMS2-201ENST00000324938 ZNF790Q6PG37 636 aa26.18■■□□□ 1.78
LIMS2-201ENST00000324938 UNC5CLQ8IV45 518 aa26.18■■□□□ 1.78
LIMS2-201ENST00000324938 BRPF3Q9ULD4 1205 aa26.17■■□□□ 1.78
LIMS2-201ENST00000324938 HDAC5Q9UQL6 1122 aa26.17■■□□□ 1.78
LIMS2-201ENST00000324938 PARP4Q9UKK3 1724 aaKnown RBP26.17■■□□□ 1.78
LIMS2-201ENST00000324938 PI4K2BQ8TCG2 481 aa26.17■■□□□ 1.78
LIMS2-201ENST00000324938 DDX58O95786 925 aaKnown RBP26.16■■□□□ 1.78
LIMS2-201ENST00000324938 C9orf78Q9NZ63 289 aaPredicted RBP26.16■■□□□ 1.78
LIMS2-201ENST00000324938 PTMSP20962 102 aa26.15■■□□□ 1.78
LIMS2-201ENST00000324938 MCCP23508 829 aa26.15■■□□□ 1.78
LIMS2-201ENST00000324938 PDIA6Q15084 440 aa26.15■■□□□ 1.78
LIMS2-201ENST00000324938 CLEC17AQ6ZS10 378 aa26.15■■□□□ 1.78
LIMS2-201ENST00000324938 LINS1Q8NG48 757 aa26.15■■□□□ 1.78
LIMS2-201ENST00000324938 CPDO75976 1380 aa26.15■■□□□ 1.78
LIMS2-201ENST00000324938 SPATA31A3Q5VYP0 1347 aa26.15■■□□□ 1.78
LIMS2-201ENST00000324938 USP42Q9H9J4 1324 aaKnown RBP26.15■■□□□ 1.78
LIMS2-201ENST00000324938 L1TD1Q5T7N2 865 aaKnown RBP26.15■■□□□ 1.78
LIMS2-201ENST00000324938 UTYO14607 1347 aa26.14■■□□□ 1.78
LIMS2-201ENST00000324938 EPB41L2O43491 1005 aaKnown RBP26.14■■□□□ 1.78
LIMS2-201ENST00000324938 ANAPC15P60006 121 aa26.14■■□□□ 1.78
LIMS2-201ENST00000324938 IFNL2Q8IZJ0 200 aa26.14■■□□□ 1.78
LIMS2-201ENST00000324938 IL27Q8NEV9 243 aa26.14■■□□□ 1.78
LIMS2-201ENST00000324938 SSFA2P28290 1259 aa26.14■■□□□ 1.77
LIMS2-201ENST00000324938 CABLES1Q8TDN4 633 aa26.14■■□□□ 1.77
LIMS2-201ENST00000324938 IL17RAQ96F46 866 aa26.14■■□□□ 1.77
LIMS2-201ENST00000324938 CSB-PGBD3P0DP91 1061 aa26.13■■□□□ 1.77
LIMS2-201ENST00000324938 CWF19L2Q2TBE0 894 aaKnown RBP26.13■■□□□ 1.77
LIMS2-201ENST00000324938 SLC39A6Q13433 755 aa26.12■■□□□ 1.77
LIMS2-201ENST00000324938 ANO2Q9NQ90 1003 aa26.12■■□□□ 1.77
LIMS2-201ENST00000324938 LAMB4A4D0S4 1761 aa26.12■■□□□ 1.77
LIMS2-201ENST00000324938 CWC22Q9HCG8 908 aaKnown RBP26.12■■□□□ 1.77
LIMS2-201ENST00000324938 TTC41PQ6P2S7 1318 aa26.11■■□□□ 1.77
LIMS2-201ENST00000324938 FSD2A1L4K1 749 aa26.11■■□□□ 1.77
LIMS2-201ENST00000324938 GRM8O00222 908 aa26.11■■□□□ 1.77
LIMS2-201ENST00000324938 NUCB2P80303 420 aa26.11■■□□□ 1.77
LIMS2-201ENST00000324938 NFATC2IPQ8NCF5 419 aa26.11■■□□□ 1.77
LIMS2-201ENST00000324938 CHRNA2Q15822 529 aa26.1■■□□□ 1.77
LIMS2-201ENST00000324938 DCAF5Q96JK2 942 aa26.1■■□□□ 1.77
LIMS2-201ENST00000324938 GZF1Q9H116 711 aaPredicted RBP26.1■■□□□ 1.77
LIMS2-201ENST00000324938 OS9Q13438 667 aaPredicted RBP26.09■■□□□ 1.77
LIMS2-201ENST00000324938 CYP2E1P05181 493 aaPredicted RBP26.09■■□□□ 1.77
LIMS2-201ENST00000324938 SKOR2Q2VWA4 1001 aaPredicted RBP26.09■■□□□ 1.77
LIMS2-201ENST00000324938 ERC1Q8IUD2 1116 aa26.09■■□□□ 1.77
LIMS2-201ENST00000324938 PALD1Q9ULE6 856 aa26.09■■□□□ 1.77
LIMS2-201ENST00000324938 GLI3P10071 1580 aa26.09■■□□□ 1.77
LIMS2-201ENST00000324938 MCM2P49736 904 aa26.08■■□□□ 1.77
LIMS2-201ENST00000324938 CNTROBQ8N137 903 aa26.08■■□□□ 1.77
LIMS2-201ENST00000324938 AFDNP55196 1824 aaKnown RBP26.08■■□□□ 1.77
LIMS2-201ENST00000324938 CYP27B1O15528 508 aa26.08■■□□□ 1.76
LIMS2-201ENST00000324938 NEK4P51957 841 aa26.08■■□□□ 1.76
LIMS2-201ENST00000324938 AIMP1Q12904 312 aaKnown RBP26.08■■□□□ 1.76
LIMS2-201ENST00000324938 GOLGA6L3A6NEY3 463 aa26.07■■□□□ 1.76
LIMS2-201ENST00000324938 LARP1Q6PKG0 1096 aaKnown RBP26.07■■□□□ 1.76
LIMS2-201ENST00000324938 ARFGEF2Q9Y6D5 1785 aa26.07■■□□□ 1.76
LIMS2-201ENST00000324938 CLASRPQ8N2M8 674 aaKnown RBP26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms