RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 MPRIPQ6WCQ1 1025 aa24.05■■□□□ 1.44
CRLF3-201ENST00000324238 FAM13BQ9NYF5 915 aa24.05■■□□□ 1.44
CRLF3-201ENST00000324238 CNPY2Q9Y2B0 182 aa24.05■■□□□ 1.44
CRLF3-201ENST00000324238 SOS1Q07889 1333 aaPredicted RBP24.05■■□□□ 1.44
CRLF3-201ENST00000324238 ESCO1Q5FWF5 840 aa24.04■■□□□ 1.44
CRLF3-201ENST00000324238 NOL7Q9UMY1 257 aaKnown RBP24.04■■□□□ 1.44
CRLF3-201ENST00000324238 TTC21AQ8NDW8 1320 aa24.04■■□□□ 1.44
CRLF3-201ENST00000324238 RRP9O43818 475 aaKnown RBP24.04■■□□□ 1.44
CRLF3-201ENST00000324238 TRHP20396 242 aaPredicted RBP24.04■■□□□ 1.44
CRLF3-201ENST00000324238 TAF7Q15545 349 aaPredicted RBP24.04■■□□□ 1.44
CRLF3-201ENST00000324238 ARHGEF10O15013 1369 aa24.03■■□□□ 1.44
CRLF3-201ENST00000324238 THEMISQ8N1K5 641 aaPredicted RBP24.03■■□□□ 1.44
CRLF3-201ENST00000324238 TBX22Q9Y458 520 aa24.03■■□□□ 1.44
CRLF3-201ENST00000324238 NBPF6Q5VWK0 638 aa24.03■■□□□ 1.44
CRLF3-201ENST00000324238 NBPF4Q96M43 638 aa24.03■■□□□ 1.44
CRLF3-201ENST00000324238 AKAP12Q02952 1782 aa24.03■■□□□ 1.44
CRLF3-201ENST00000324238 PLCB2Q00722 1185 aa24.02■■□□□ 1.44
CRLF3-201ENST00000324238 RHPN1Q8TCX5 695 aa24.02■■□□□ 1.44
CRLF3-201ENST00000324238 SRCIN1Q9C0H9 1055 aa24.02■■□□□ 1.44
CRLF3-201ENST00000324238 OS9Q13438 667 aaPredicted RBP24.02■■□□□ 1.44
CRLF3-201ENST00000324238 CHPF2Q9P2E5 772 aa24.02■■□□□ 1.44
CRLF3-201ENST00000324238 PI4KAP2A4QPH2 592 aa24.01■■□□□ 1.43
CRLF3-201ENST00000324238 PI4KAP1Q8N8J0 262 aa24.01■■□□□ 1.43
CRLF3-201ENST00000324238 JARID2Q92833 1246 aaPredicted RBP24.01■■□□□ 1.43
CRLF3-201ENST00000324238 NRKQ7Z2Y5 1582 aa24.01■■□□□ 1.43
CRLF3-201ENST00000324238 TSPY26PQ9H489 355 aa24.01■■□□□ 1.43
CRLF3-201ENST00000324238 PSME1Q06323 249 aa24■■□□□ 1.43
CRLF3-201ENST00000324238 STAP2Q9UGK3 403 aa24■■□□□ 1.43
CRLF3-201ENST00000324238 FIBPO43427 364 aa24■■□□□ 1.43
CRLF3-201ENST00000324238 LARGE1O95461 756 aa24■■□□□ 1.43
CRLF3-201ENST00000324238 C17orf53Q8N3J3 647 aaPredicted RBP24■■□□□ 1.43
CRLF3-201ENST00000324238 MBD3O95983 291 aa24■■□□□ 1.43
CRLF3-201ENST00000324238 AK2P54819 239 aa24■■□□□ 1.43
CRLF3-201ENST00000324238 ZKSCAN5Q9Y2L8 839 aa24■■□□□ 1.43
CRLF3-201ENST00000324238 SNX14Q9Y5W7 946 aa24■■□□□ 1.43
CRLF3-201ENST00000324238 UBR1Q8IWV7 1749 aa23.99■■□□□ 1.43
CRLF3-201ENST00000324238 MCM2P49736 904 aa23.99■■□□□ 1.43
CRLF3-201ENST00000324238 PA2G4Q9UQ80 394 aaKnown RBP23.99■■□□□ 1.43
CRLF3-201ENST00000324238 SSH2Q76I76 1423 aa23.99■■□□□ 1.43
CRLF3-201ENST00000324238 TPM2P07951 284 aa23.99■■□□□ 1.43
CRLF3-201ENST00000324238 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.99■■□□□ 1.43
CRLF3-201ENST00000324238 PI4K2BQ8TCG2 481 aa23.99■■□□□ 1.43
CRLF3-201ENST00000324238 HSPA4P34932 840 aa23.98■■□□□ 1.43
CRLF3-201ENST00000324238 COL9A3Q14050 684 aaPredicted RBP23.98■■□□□ 1.43
CRLF3-201ENST00000324238 CHMP3Q9Y3E7 222 aa23.98■■□□□ 1.43
CRLF3-201ENST00000324238 PRAMEF22A3QJZ6 481 aa23.98■■□□□ 1.43
CRLF3-201ENST00000324238 SSH3Q8TE77 659 aa23.98■■□□□ 1.43
CRLF3-201ENST00000324238 USP25Q9UHP3 1055 aa23.98■■□□□ 1.43
CRLF3-201ENST00000324238 RGPD8O14715 1765 aaPredicted RBP23.98■■□□□ 1.43
CRLF3-201ENST00000324238 PHF8Q9UPP1 1060 aa23.97■■□□□ 1.43
CRLF3-201ENST00000324238 KDRP35968 1356 aa23.97■■□□□ 1.43
CRLF3-201ENST00000324238 RUFY3Q7L099 469 aa23.97■■□□□ 1.43
CRLF3-201ENST00000324238 ANAPC15P60006 121 aa23.96■■□□□ 1.43
CRLF3-201ENST00000324238 TCHHQ07283 1943 aa23.96■■□□□ 1.43
CRLF3-201ENST00000324238 CASTP20810 708 aaKnown RBP23.96■■□□□ 1.43
CRLF3-201ENST00000324238 SGSM2O43147 1006 aa23.95■■□□□ 1.43
CRLF3-201ENST00000324238 HCLS1P14317 486 aaPredicted RBP23.95■■□□□ 1.43
CRLF3-201ENST00000324238 PTH1RQ03431 593 aa23.95■■□□□ 1.43
CRLF3-201ENST00000324238 ADCK5Q3MIX3 580 aa23.95■■□□□ 1.43
CRLF3-201ENST00000324238 CCDC83Q8IWF9 413 aa23.95■■□□□ 1.43
CRLF3-201ENST00000324238 INTS4Q96HW7 963 aaKnown RBP23.95■■□□□ 1.43
CRLF3-201ENST00000324238 UQCRHLA0A096LP55 91 aa23.95■■□□□ 1.42
CRLF3-201ENST00000324238 UQCRHP07919 91 aa23.95■■□□□ 1.42
CRLF3-201ENST00000324238 MAP3K5Q99683 1374 aa23.95■■□□□ 1.42
CRLF3-201ENST00000324238 TSC1Q92574 1164 aa23.94■■□□□ 1.42
CRLF3-201ENST00000324238 TCEANC2Q96MN5 208 aa23.94■■□□□ 1.42
CRLF3-201ENST00000324238 TEFQ10587 303 aa23.94■■□□□ 1.42
CRLF3-201ENST00000324238 AIMP1Q12904 312 aaKnown RBP23.94■■□□□ 1.42
CRLF3-201ENST00000324238 SYT1P21579 422 aa23.94■■□□□ 1.42
CRLF3-201ENST00000324238 ZNF530Q6P9A1 599 aaPredicted RBP23.94■■□□□ 1.42
CRLF3-201ENST00000324238 NECAB1Q8N987 351 aa23.94■■□□□ 1.42
CRLF3-201ENST00000324238 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.94■■□□□ 1.42
CRLF3-201ENST00000324238 RPAP1Q9BWH6 1393 aaPredicted RBP23.93■■□□□ 1.42
CRLF3-201ENST00000324238 WDR33Q9C0J8 1336 aaKnown RBP23.93■■□□□ 1.42
CRLF3-201ENST00000324238 PRPF40BQ6NWY9 871 aaKnown RBP23.93■■□□□ 1.42
CRLF3-201ENST00000324238 LSG1Q9H089 658 aaKnown RBP23.93■■□□□ 1.42
CRLF3-201ENST00000324238 GLIPR1L2Q4G1C9 344 aa23.93■■□□□ 1.42
CRLF3-201ENST00000324238 ORAI2Q96SN7 254 aa23.93■■□□□ 1.42
CRLF3-201ENST00000324238 TTC12Q9H892 705 aaPredicted RBP23.92■■□□□ 1.42
CRLF3-201ENST00000324238 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.92■■□□□ 1.42
CRLF3-201ENST00000324238 RGPD1P0DJD0 1748 aa23.92■■□□□ 1.42
CRLF3-201ENST00000324238 GIMAP6Q6P9H5 292 aa23.92■■□□□ 1.42
CRLF3-201ENST00000324238 ZMYND15Q9H091 742 aa23.92■■□□□ 1.42
CRLF3-201ENST00000324238 ZNF500O60304 480 aaPredicted RBP23.91■■□□□ 1.42
CRLF3-201ENST00000324238 CCDC39Q9UFE4 941 aa23.91■■□□□ 1.42
CRLF3-201ENST00000324238 BTBD11A6QL63 1104 aa23.91■■□□□ 1.42
CRLF3-201ENST00000324238 PROSER3Q2NL68 480 aa23.91■■□□□ 1.42
CRLF3-201ENST00000324238 CWF19L2Q2TBE0 894 aaKnown RBP23.91■■□□□ 1.42
CRLF3-201ENST00000324238 DNTTIP2Q5QJE6 756 aaKnown RBP23.91■■□□□ 1.42
CRLF3-201ENST00000324238 FAM173BQ6P4H8 233 aa23.91■■□□□ 1.42
CRLF3-201ENST00000324238 RAD50Q92878 1312 aa23.91■■□□□ 1.42
CRLF3-201ENST00000324238 DNAAF4Q8WXU2 420 aa23.91■■□□□ 1.42
CRLF3-201ENST00000324238 JAKMIP1Q96N16 626 aaKnown RBP23.91■■□□□ 1.42
CRLF3-201ENST00000324238 FAM177BA6PVY3 158 aa23.9■■□□□ 1.42
CRLF3-201ENST00000324238 KIF1BPQ96EK5 621 aa23.9■■□□□ 1.42
CRLF3-201ENST00000324238 SMC3Q9UQE7 1217 aa23.9■■□□□ 1.42
CRLF3-201ENST00000324238 VPS37CA5D8V6 355 aaPredicted RBP23.9■■□□□ 1.42
CRLF3-201ENST00000324238 DNM1Q05193 864 aaKnown RBP23.9■■□□□ 1.42
CRLF3-201ENST00000324238 HS1BP3Q53T59 392 aa23.9■■□□□ 1.42
CRLF3-201ENST00000324238 FERMT3Q86UX7 667 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms