RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 HSP90AB4PQ58FF6 505 aa27.33■■□□□ 1.96
PNKP-201ENST00000322344 KRT28Q7Z3Y7 464 aa27.33■■□□□ 1.96
PNKP-201ENST00000322344 SURF6O75683 361 aaKnown RBP27.32■■□□□ 1.96
PNKP-201ENST00000322344 MCM2P49736 904 aa27.31■■□□□ 1.96
PNKP-201ENST00000322344 XPCQ01831 940 aaPredicted RBP27.31■■□□□ 1.96
PNKP-201ENST00000322344 RILPL2Q969X0 211 aa27.31■■□□□ 1.96
PNKP-201ENST00000322344 KIF1BPQ96EK5 621 aa27.31■■□□□ 1.96
PNKP-201ENST00000322344 HEG1Q9ULI3 1381 aa27.31■■□□□ 1.96
PNKP-201ENST00000322344 C1orf167Q5SNV9 1468 aa27.31■■□□□ 1.96
PNKP-201ENST00000322344 PROSER2Q86WR7 435 aaPredicted RBP27.31■■□□□ 1.96
PNKP-201ENST00000322344 HDAC5Q9UQL6 1122 aa27.31■■□□□ 1.96
PNKP-201ENST00000322344 ADCY9O60503 1353 aa27.31■■□□□ 1.96
PNKP-201ENST00000322344 SRGAP3O43295 1099 aa27.3■■□□□ 1.96
PNKP-201ENST00000322344 MRE11P49959 708 aa27.3■■□□□ 1.96
PNKP-201ENST00000322344 LMOD2Q6P5Q4 547 aa27.3■■□□□ 1.96
PNKP-201ENST00000322344 RHPN1Q8TCX5 695 aa27.3■■□□□ 1.96
PNKP-201ENST00000322344 ALDH1L1O75891 902 aa27.29■■□□□ 1.96
PNKP-201ENST00000322344 CYP2E1P05181 493 aaPredicted RBP27.29■■□□□ 1.96
PNKP-201ENST00000322344 NBPF7P0C2Y1 421 aaPredicted RBP27.29■■□□□ 1.96
PNKP-201ENST00000322344 XRCC6P12956 609 aaKnown RBP eCLIP27.29■■□□□ 1.96
PNKP-201ENST00000322344 IL17RAQ96F46 866 aa27.29■■□□□ 1.96
PNKP-201ENST00000322344 RTN4Q9NQC3 1192 aaKnown RBP27.29■■□□□ 1.96
PNKP-201ENST00000322344 GIGYF1O75420 1035 aaPredicted RBP27.28■■□□□ 1.96
PNKP-201ENST00000322344 BAG4O95429 457 aaKnown RBP27.28■■□□□ 1.96
PNKP-201ENST00000322344 C19orf44Q9H6X5 657 aa27.28■■□□□ 1.96
PNKP-201ENST00000322344 IL1RAPL2Q9NP60 686 aa27.28■■□□□ 1.96
PNKP-201ENST00000322344 ADAMTS7Q9UKP4 1686 aa27.28■■□□□ 1.96
PNKP-201ENST00000322344 MTX1Q13505 466 aa27.27■■□□□ 1.96
PNKP-201ENST00000322344 FAM43AQ8N2R8 423 aa27.26■■□□□ 1.95
PNKP-201ENST00000322344 KSR2Q6VAB6 950 aa27.25■■□□□ 1.95
PNKP-201ENST00000322344 ANO2Q9NQ90 1003 aa27.25■■□□□ 1.95
PNKP-201ENST00000322344 AXIN2Q9Y2T1 843 aa27.25■■□□□ 1.95
PNKP-201ENST00000322344 SIPA1L3O60292 1781 aaPredicted RBP27.24■■□□□ 1.95
PNKP-201ENST00000322344 HYPKQ9NX55 129 aa27.24■■□□□ 1.95
PNKP-201ENST00000322344 NEK4P51957 841 aa27.24■■□□□ 1.95
PNKP-201ENST00000322344 NUTM1Q86Y26 1132 aa27.24■■□□□ 1.95
PNKP-201ENST00000322344 ERBB3P21860 1342 aa27.23■■□□□ 1.95
PNKP-201ENST00000322344 PI4K2BQ8TCG2 481 aa27.23■■□□□ 1.95
PNKP-201ENST00000322344 USP42Q9H9J4 1324 aaKnown RBP27.23■■□□□ 1.95
PNKP-201ENST00000322344 ALS2Q96Q42 1657 aa27.23■■□□□ 1.95
PNKP-201ENST00000322344 ANXA1P04083 346 aa27.23■■□□□ 1.95
PNKP-201ENST00000322344 UNC5CLQ8IV45 518 aa27.23■■□□□ 1.95
PNKP-201ENST00000322344 MAP3K2Q9Y2U5 619 aa27.22■■□□□ 1.95
PNKP-201ENST00000322344 KLHL40Q2TBA0 621 aa27.21■■□□□ 1.95
PNKP-201ENST00000322344 GRPEL1Q9HAV7 217 aa27.21■■□□□ 1.95
PNKP-201ENST00000322344 TTC41PQ6P2S7 1318 aa27.2■■□□□ 1.95
PNKP-201ENST00000322344 DDX58O95786 925 aaKnown RBP27.2■■□□□ 1.94
PNKP-201ENST00000322344 CNTROBQ8N137 903 aa27.2■■□□□ 1.94
PNKP-201ENST00000322344 C9orf78Q9NZ63 289 aaPredicted RBP27.2■■□□□ 1.94
PNKP-201ENST00000322344 PLEKHG2Q9H7P9 1386 aa27.2■■□□□ 1.94
PNKP-201ENST00000322344 PLEKHG5O94827 1062 aa27.19■■□□□ 1.94
PNKP-201ENST00000322344 ABCC6O95255 1503 aa27.19■■□□□ 1.94
PNKP-201ENST00000322344 ZGPATQ8N5A5 531 aaKnown RBP27.19■■□□□ 1.94
PNKP-201ENST00000322344 DNAJC5Q9H3Z4 198 aa27.19■■□□□ 1.94
PNKP-201ENST00000322344 DDX21Q9NR30 783 aaKnown RBP eCLIP27.19■■□□□ 1.94
PNKP-201ENST00000322344 ERC1Q8IUD2 1116 aa27.18■■□□□ 1.94
PNKP-201ENST00000322344 RAPGEF4Q8WZA2 1011 aa27.18■■□□□ 1.94
PNKP-201ENST00000322344 TMX3Q96JJ7 454 aa27.18■■□□□ 1.94
PNKP-201ENST00000322344 CUL4AQ13619 759 aa27.17■■□□□ 1.94
PNKP-201ENST00000322344 ARXQ96QS3 562 aa27.17■■□□□ 1.94
PNKP-201ENST00000322344 PALD1Q9ULE6 856 aa27.17■■□□□ 1.94
PNKP-201ENST00000322344 OS9Q13438 667 aaPredicted RBP27.17■■□□□ 1.94
PNKP-201ENST00000322344 PROSER3Q2NL68 480 aa27.17■■□□□ 1.94
PNKP-201ENST00000322344 LINS1Q8NG48 757 aa27.17■■□□□ 1.94
PNKP-201ENST00000322344 DCCP43146 1447 aa27.16■■□□□ 1.94
PNKP-201ENST00000322344 INTS4Q96HW7 963 aaKnown RBP27.16■■□□□ 1.94
PNKP-201ENST00000322344 DDX49Q9Y6V7 483 aaKnown RBP27.16■■□□□ 1.94
PNKP-201ENST00000322344 GLRX3O76003 335 aaKnown RBP27.16■■□□□ 1.94
PNKP-201ENST00000322344 HSPA4P34932 840 aa27.16■■□□□ 1.94
PNKP-201ENST00000322344 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.16■■□□□ 1.94
PNKP-201ENST00000322344 ATF3P18847 181 aa27.15■■□□□ 1.94
PNKP-201ENST00000322344 CLASRPQ8N2M8 674 aaKnown RBP27.15■■□□□ 1.94
PNKP-201ENST00000322344 UTYO14607 1347 aa27.15■■□□□ 1.94
PNKP-201ENST00000322344 CRYBG1Q9Y4K1 1723 aa27.15■■□□□ 1.94
PNKP-201ENST00000322344 SGSM2O43147 1006 aa27.14■■□□□ 1.94
PNKP-201ENST00000322344 ZC3H6P61129 1189 aaKnown RBP27.14■■□□□ 1.94
PNKP-201ENST00000322344 MCTP1Q6DN14 999 aa27.14■■□□□ 1.94
PNKP-201ENST00000322344 SPG7Q9UQ90 795 aa27.14■■□□□ 1.94
PNKP-201ENST00000322344 RGPD5Q99666 1765 aa27.14■■□□□ 1.94
PNKP-201ENST00000322344 TATP17735 454 aaPredicted RBP27.14■■□□□ 1.93
PNKP-201ENST00000322344 GPATCH3Q96I76 525 aa27.13■■□□□ 1.93
PNKP-201ENST00000322344 AK9Q5TCS8 1911 aa27.13■■□□□ 1.93
PNKP-201ENST00000322344 NPHP3Q7Z494 1330 aa27.12■■□□□ 1.93
PNKP-201ENST00000322344 RAD50Q92878 1312 aa27.12■■□□□ 1.93
PNKP-201ENST00000322344 PKP1Q13835 747 aa27.12■■□□□ 1.93
PNKP-201ENST00000322344 PANK2Q9BZ23 570 aa27.12■■□□□ 1.93
PNKP-201ENST00000322344 SLC52A2Q9HAB3 445 aa27.12■■□□□ 1.93
PNKP-201ENST00000322344 PRAMEF22A3QJZ6 481 aa27.12■■□□□ 1.93
PNKP-201ENST00000322344 ZNF790Q6PG37 636 aa27.12■■□□□ 1.93
PNKP-201ENST00000322344 GRM8O00222 908 aa27.11■■□□□ 1.93
PNKP-201ENST00000322344 LMBRD1Q9NUN5 540 aa27.11■■□□□ 1.93
PNKP-201ENST00000322344 NLRP2Q9NX02 1062 aa27.11■■□□□ 1.93
PNKP-201ENST00000322344 ZDHHC9Q9Y397 364 aa27.11■■□□□ 1.93
PNKP-201ENST00000322344 KDM6AO15550 1401 aaPredicted RBP27.1■■□□□ 1.93
PNKP-201ENST00000322344 SCN11AQ9UI33 1791 aa27.1■■□□□ 1.93
PNKP-201ENST00000322344 MAP4K4O95819 1239 aaPredicted RBP27.1■■□□□ 1.93
PNKP-201ENST00000322344 PHKG2P15735 406 aa27.1■■□□□ 1.93
PNKP-201ENST00000322344 PDIA6Q15084 440 aa27.1■■□□□ 1.93
PNKP-201ENST00000322344 CWF19L2Q2TBE0 894 aaKnown RBP27.1■■□□□ 1.93
PNKP-201ENST00000322344 ECHDC1Q9NTX5 307 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms