RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 STAP2Q9UGK3 403 aa21.2■□□□□ 0.98
COL9A1-201ENST00000320755 ORAI2Q96SN7 254 aa21.19■□□□□ 0.98
COL9A1-201ENST00000320755 LARP6Q9BRS8 491 aaKnown RBP21.19■□□□□ 0.98
COL9A1-201ENST00000320755 TPRNQ4KMQ1 711 aa21.19■□□□□ 0.98
COL9A1-201ENST00000320755 BABAM1Q9NWV8 329 aa21.18■□□□□ 0.98
COL9A1-201ENST00000320755 PRAMEF22A3QJZ6 481 aa21.18■□□□□ 0.98
COL9A1-201ENST00000320755 BEND3Q5T5X7 828 aa21.17■□□□□ 0.98
COL9A1-201ENST00000320755 ZSCAN23Q3MJ62 389 aa21.17■□□□□ 0.98
COL9A1-201ENST00000320755 PLEKHO1Q53GL0 409 aaPredicted RBP21.16■□□□□ 0.98
COL9A1-201ENST00000320755 C1orf141Q5JVX7 400 aa21.16■□□□□ 0.98
COL9A1-201ENST00000320755 ERBB4Q15303 1308 aa21.16■□□□□ 0.98
COL9A1-201ENST00000320755 PROSER3Q2NL68 480 aa21.16■□□□□ 0.98
COL9A1-201ENST00000320755 CWC27Q6UX04 472 aaKnown RBP21.16■□□□□ 0.98
COL9A1-201ENST00000320755 C9orf78Q9NZ63 289 aaPredicted RBP21.16■□□□□ 0.98
COL9A1-201ENST00000320755 ESPNB1AK53 854 aa21.15■□□□□ 0.98
COL9A1-201ENST00000320755 AIMP1Q12904 312 aaKnown RBP21.15■□□□□ 0.98
COL9A1-201ENST00000320755 GPT2Q8TD30 523 aa21.15■□□□□ 0.98
COL9A1-201ENST00000320755 ANP32BQ92688 251 aaKnown RBP21.15■□□□□ 0.98
COL9A1-201ENST00000320755 KIF1BPQ96EK5 621 aa21.15■□□□□ 0.98
COL9A1-201ENST00000320755 NAP1L5Q96NT1 182 aaPredicted RBP21.15■□□□□ 0.98
COL9A1-201ENST00000320755 FER1L4A9Z1Z3 1794 aa21.15■□□□□ 0.98
COL9A1-201ENST00000320755 DTNBO60941 627 aa21.15■□□□□ 0.98
COL9A1-201ENST00000320755 RAB11FIP3O75154 756 aa21.15■□□□□ 0.98
COL9A1-201ENST00000320755 GCP02774 474 aa21.15■□□□□ 0.98
COL9A1-201ENST00000320755 CEMIPQ8WUJ3 1361 aa21.15■□□□□ 0.98
COL9A1-201ENST00000320755 NSFL1CQ9UNZ2 370 aaKnown RBP21.15■□□□□ 0.98
COL9A1-201ENST00000320755 SPG7Q9UQ90 795 aa21.15■□□□□ 0.98
COL9A1-201ENST00000320755 FAM208AQ9UK61 1670 aaKnown RBP21.14■□□□□ 0.98
COL9A1-201ENST00000320755 CWF19L2Q2TBE0 894 aaKnown RBP21.14■□□□□ 0.98
COL9A1-201ENST00000320755 PA2G4Q9UQ80 394 aaKnown RBP21.14■□□□□ 0.98
COL9A1-201ENST00000320755 MAP3K2Q9Y2U5 619 aa21.14■□□□□ 0.98
COL9A1-201ENST00000320755 XRN1Q8IZH2 1706 aaKnown RBP21.14■□□□□ 0.97
COL9A1-201ENST00000320755 POLA2Q14181 598 aa21.14■□□□□ 0.97
COL9A1-201ENST00000320755 AKAP4Q5JQC9 854 aa21.14■□□□□ 0.97
COL9A1-201ENST00000320755 KCNH5Q8NCM2 988 aa21.14■□□□□ 0.97
COL9A1-201ENST00000320755 PI4K2BQ8TCG2 481 aa21.13■□□□□ 0.97
COL9A1-201ENST00000320755 MCM2P49736 904 aa21.12■□□□□ 0.97
COL9A1-201ENST00000320755 GDPD2Q9HCC8 539 aa21.12■□□□□ 0.97
COL9A1-201ENST00000320755 PRIM1P49642 420 aaKnown RBP21.12■□□□□ 0.97
COL9A1-201ENST00000320755 RNMTO43148 476 aaKnown RBP21.11■□□□□ 0.97
COL9A1-201ENST00000320755 CLCN1P35523 988 aa21.11■□□□□ 0.97
COL9A1-201ENST00000320755 ANKRD24Q8TF21 1146 aa21.11■□□□□ 0.97
COL9A1-201ENST00000320755 LRRC37A3O60309 1634 aa21.11■□□□□ 0.97
COL9A1-201ENST00000320755 ANAPC15P60006 121 aa21.11■□□□□ 0.97
COL9A1-201ENST00000320755 DBF4Q9UBU7 674 aaPredicted RBP21.11■□□□□ 0.97
COL9A1-201ENST00000320755 KIAA1211Q6ZU35 1233 aa21.1■□□□□ 0.97
COL9A1-201ENST00000320755 CNTROBQ8N137 903 aa21.1■□□□□ 0.97
COL9A1-201ENST00000320755 CPA1P15085 419 aa21.1■□□□□ 0.97
COL9A1-201ENST00000320755 ZC3H6P61129 1189 aaKnown RBP21.1■□□□□ 0.97
COL9A1-201ENST00000320755 AXIN2Q9Y2T1 843 aa21.1■□□□□ 0.97
COL9A1-201ENST00000320755 MARF1Q9Y4F3 1742 aaKnown RBP21.1■□□□□ 0.97
COL9A1-201ENST00000320755 SYCE3A1L190 88 aa21.1■□□□□ 0.97
COL9A1-201ENST00000320755 RBSNQ9H1K0 784 aa21.1■□□□□ 0.97
COL9A1-201ENST00000320755 ADCY9O60503 1353 aa21.1■□□□□ 0.97
COL9A1-201ENST00000320755 DDX54Q8TDD1 881 aaKnown RBP21.09■□□□□ 0.97
COL9A1-201ENST00000320755 TMEM63CQ9P1W3 806 aa21.09■□□□□ 0.97
COL9A1-201ENST00000320755 RASEFQ8IZ41 740 aa21.09■□□□□ 0.97
COL9A1-201ENST00000320755 SGSM2O43147 1006 aa21.08■□□□□ 0.97
COL9A1-201ENST00000320755 HSPA4P34932 840 aa21.08■□□□□ 0.97
COL9A1-201ENST00000320755 CUL4AQ13619 759 aa21.08■□□□□ 0.97
COL9A1-201ENST00000320755 LTN1O94822 1766 aa21.08■□□□□ 0.97
COL9A1-201ENST00000320755 GIGYF1O75420 1035 aaPredicted RBP21.08■□□□□ 0.97
COL9A1-201ENST00000320755 CLASRPQ8N2M8 674 aaKnown RBP21.08■□□□□ 0.97
COL9A1-201ENST00000320755 CACNA1FO60840 1977 aa21.08■□□□□ 0.97
COL9A1-201ENST00000320755 BRD1O95696 1058 aa21.08■□□□□ 0.96
COL9A1-201ENST00000320755 ZNF445P59923 1031 aa21.08■□□□□ 0.96
COL9A1-201ENST00000320755 SLC39A6Q13433 755 aa21.08■□□□□ 0.96
COL9A1-201ENST00000320755 ARHGEF25Q86VW2 580 aa21.07■□□□□ 0.96
COL9A1-201ENST00000320755 DIAPH3Q9NSV4 1193 aa21.07■□□□□ 0.96
COL9A1-201ENST00000320755 AOX1Q06278 1338 aa21.07■□□□□ 0.96
COL9A1-201ENST00000320755 HOXB7P09629 217 aa21.07■□□□□ 0.96
COL9A1-201ENST00000320755 AMOTQ4VCS5 1084 aa21.07■□□□□ 0.96
COL9A1-201ENST00000320755 CCDC173Q0VFZ6 552 aa21.06■□□□□ 0.96
COL9A1-201ENST00000320755 RNF214Q8ND24 703 aa21.06■□□□□ 0.96
COL9A1-201ENST00000320755 SNX14Q9Y5W7 946 aa21.06■□□□□ 0.96
COL9A1-201ENST00000320755 PXDNLA1KZ92 1463 aa21.06■□□□□ 0.96
COL9A1-201ENST00000320755 IFIT2P09913 472 aaKnown RBP21.06■□□□□ 0.96
COL9A1-201ENST00000320755 HSP90AB4PQ58FF6 505 aa21.06■□□□□ 0.96
COL9A1-201ENST00000320755 SIL1Q9H173 461 aa21.06■□□□□ 0.96
COL9A1-201ENST00000320755 KSR2Q6VAB6 950 aa21.05■□□□□ 0.96
COL9A1-201ENST00000320755 CHMP4AQ9BY43 222 aa21.05■□□□□ 0.96
COL9A1-201ENST00000320755 MYL6BP14649 208 aa21.05■□□□□ 0.96
COL9A1-201ENST00000320755 AACSQ86V21 672 aa21.05■□□□□ 0.96
COL9A1-201ENST00000320755 RGPD2P0DJD1 1756 aa21.05■□□□□ 0.96
COL9A1-201ENST00000320755 LSG1Q9H089 658 aaKnown RBP21.04■□□□□ 0.96
COL9A1-201ENST00000320755 RAD50Q92878 1312 aa21.04■□□□□ 0.96
COL9A1-201ENST00000320755 PXDNQ92626 1479 aa21.04■□□□□ 0.96
COL9A1-201ENST00000320755 INTS4Q96HW7 963 aaKnown RBP21.04■□□□□ 0.96
COL9A1-201ENST00000320755 GLRX3O76003 335 aaKnown RBP21.03■□□□□ 0.96
COL9A1-201ENST00000320755 JARID2Q92833 1246 aaPredicted RBP21.03■□□□□ 0.96
COL9A1-201ENST00000320755 PIP4K2AP48426 406 aaPredicted RBP21.03■□□□□ 0.96
COL9A1-201ENST00000320755 CCDC8Q9H0W5 538 aaPredicted RBP21.03■□□□□ 0.96
COL9A1-201ENST00000320755 CASTP20810 708 aaKnown RBP21.03■□□□□ 0.96
COL9A1-201ENST00000320755 AK2P54819 239 aa21.03■□□□□ 0.96
COL9A1-201ENST00000320755 NLRP2Q9NX02 1062 aa21.03■□□□□ 0.96
COL9A1-201ENST00000320755 NFAT5O94916 1531 aa21.03■□□□□ 0.96
COL9A1-201ENST00000320755 PTH1RQ03431 593 aa21.02■□□□□ 0.96
COL9A1-201ENST00000320755 KRT28Q7Z3Y7 464 aa21.02■□□□□ 0.96
COL9A1-201ENST00000320755 KLHDC4Q8TBB5 520 aa21.02■□□□□ 0.96
COL9A1-201ENST00000320755 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms