RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 PI4KAP1Q8N8J0 262 aa22.32■■□□□ 1.16
RAB39A-201ENST00000320578 PAPPAQ13219 1627 aa22.32■■□□□ 1.16
RAB39A-201ENST00000320578 ALDH1L1O75891 902 aa22.31■■□□□ 1.16
RAB39A-201ENST00000320578 USP44Q9H0E7 712 aa22.31■■□□□ 1.16
RAB39A-201ENST00000320578 NRAPQ86VF7 1730 aa22.31■■□□□ 1.16
RAB39A-201ENST00000320578 USP35Q9P2H5 1018 aa22.31■■□□□ 1.16
RAB39A-201ENST00000320578 SLIT2O94813 1529 aa22.31■■□□□ 1.16
RAB39A-201ENST00000320578 LRP6O75581 1613 aa22.3■■□□□ 1.16
RAB39A-201ENST00000320578 NWD2Q9ULI1 1742 aa22.3■■□□□ 1.16
RAB39A-201ENST00000320578 PROSER3Q2NL68 480 aa22.3■■□□□ 1.16
RAB39A-201ENST00000320578 GLI3P10071 1580 aa22.3■■□□□ 1.16
RAB39A-201ENST00000320578 SPATA31A1Q5TZJ5 1347 aa22.3■■□□□ 1.16
RAB39A-201ENST00000320578 C5P01031 1676 aa22.3■■□□□ 1.16
RAB39A-201ENST00000320578 JCADQ9P266 1359 aa22.3■■□□□ 1.16
RAB39A-201ENST00000320578 EXOC5O00471 708 aa22.29■■□□□ 1.16
RAB39A-201ENST00000320578 UBR2Q8IWV8 1755 aa22.29■■□□□ 1.16
RAB39A-201ENST00000320578 ADAMTS2O95450 1211 aa22.29■■□□□ 1.16
RAB39A-201ENST00000320578 ANXA1P04083 346 aa22.28■■□□□ 1.16
RAB39A-201ENST00000320578 ANKRD45Q5TZF3 282 aa22.28■■□□□ 1.16
RAB39A-201ENST00000320578 LRP10Q7Z4F1 713 aa22.28■■□□□ 1.16
RAB39A-201ENST00000320578 HDAC5Q9UQL6 1122 aa22.28■■□□□ 1.16
RAB39A-201ENST00000320578 KCPQ6ZWJ8 1503 aa22.28■■□□□ 1.16
RAB39A-201ENST00000320578 ATP8B2P98198 1209 aa22.27■■□□□ 1.16
RAB39A-201ENST00000320578 TMOD3Q9NYL9 352 aa22.27■■□□□ 1.16
RAB39A-201ENST00000320578 USP16Q9Y5T5 823 aa22.27■■□□□ 1.16
RAB39A-201ENST00000320578 WNK3Q9BYP7 1800 aa22.27■■□□□ 1.16
RAB39A-201ENST00000320578 LAMB4A4D0S4 1761 aa22.27■■□□□ 1.16
RAB39A-201ENST00000320578 UBTFL1P0CB47 393 aaPredicted RBP22.27■■□□□ 1.15
RAB39A-201ENST00000320578 SPATA31A5Q5VU36 1347 aa22.26■■□□□ 1.15
RAB39A-201ENST00000320578 SPATA31A7Q8IWB4 1347 aa22.26■■□□□ 1.15
RAB39A-201ENST00000320578 BARGINQ6ZT62 677 aa22.26■■□□□ 1.15
RAB39A-201ENST00000320578 MAP3K2Q9Y2U5 619 aa22.26■■□□□ 1.15
RAB39A-201ENST00000320578 LINS1Q8NG48 757 aa22.25■■□□□ 1.15
RAB39A-201ENST00000320578 TOGARAM1Q9Y4F4 1720 aa22.25■■□□□ 1.15
RAB39A-201ENST00000320578 VSIG10Q8N0Z9 540 aa22.24■■□□□ 1.15
RAB39A-201ENST00000320578 LNPKQ9C0E8 428 aa22.24■■□□□ 1.15
RAB39A-201ENST00000320578 CERKQ8TCT0 537 aa22.24■■□□□ 1.15
RAB39A-201ENST00000320578 NUTM2BA6NNL0 878 aaPredicted RBP22.23■■□□□ 1.15
RAB39A-201ENST00000320578 NUTM2EB1AL46 878 aaPredicted RBP22.23■■□□□ 1.15
RAB39A-201ENST00000320578 NUTM2AQ8IVF1 878 aaPredicted RBP22.23■■□□□ 1.15
RAB39A-201ENST00000320578 TEX13AQ9BXU3 409 aaPredicted RBP22.23■■□□□ 1.15
RAB39A-201ENST00000320578 SPATA31A6Q5VVP1 1343 aa22.23■■□□□ 1.15
RAB39A-201ENST00000320578 ANP32AP39687 249 aaKnown RBP22.22■■□□□ 1.15
RAB39A-201ENST00000320578 LRRFIP2Q9Y608 721 aaKnown RBP22.22■■□□□ 1.15
RAB39A-201ENST00000320578 UTYO14607 1347 aa22.22■■□□□ 1.15
RAB39A-201ENST00000320578 XAGE3Q8WTP9 111 aa22.22■■□□□ 1.15
RAB39A-201ENST00000320578 AEBP2Q6ZN18 517 aaPredicted RBP22.21■■□□□ 1.15
RAB39A-201ENST00000320578 COPS6Q7L5N1 327 aa22.21■■□□□ 1.15
RAB39A-201ENST00000320578 UNC5CLQ8IV45 518 aa22.21■■□□□ 1.15
RAB39A-201ENST00000320578 PIGBQ92521 554 aa22.21■■□□□ 1.15
RAB39A-201ENST00000320578 ZBTB47Q9UFB7 747 aaPredicted RBP22.21■■□□□ 1.15
RAB39A-201ENST00000320578 BCL9O00512 1426 aa22.2■■□□□ 1.14
RAB39A-201ENST00000320578 SSH3Q8TE77 659 aa22.2■■□□□ 1.14
RAB39A-201ENST00000320578 BMP2KLQ5H9B9 411 aa22.2■■□□□ 1.14
RAB39A-201ENST00000320578 ANKRD13DQ6ZTN6 518 aa22.2■■□□□ 1.14
RAB39A-201ENST00000320578 RIC3Q7Z5B4 369 aa22.2■■□□□ 1.14
RAB39A-201ENST00000320578 METTL22Q9BUU2 404 aaPredicted RBP22.2■■□□□ 1.14
RAB39A-201ENST00000320578 MYL6BP14649 208 aa22.19■■□□□ 1.14
RAB39A-201ENST00000320578 NEXNQ0ZGT2 675 aa22.19■■□□□ 1.14
RAB39A-201ENST00000320578 MTX1Q13505 466 aa22.19■■□□□ 1.14
RAB39A-201ENST00000320578 POLA2Q14181 598 aa22.18■■□□□ 1.14
RAB39A-201ENST00000320578 DDB1Q16531 1140 aa22.18■■□□□ 1.14
RAB39A-201ENST00000320578 NBPF7P0C2Y1 421 aaPredicted RBP22.17■■□□□ 1.14
RAB39A-201ENST00000320578 AIMP1Q12904 312 aaKnown RBP22.17■■□□□ 1.14
RAB39A-201ENST00000320578 FNBP4Q8N3X1 1017 aaPredicted RBP22.17■■□□□ 1.14
RAB39A-201ENST00000320578 ATG3Q9NT62 314 aa22.17■■□□□ 1.14
RAB39A-201ENST00000320578 VPS72Q15906 364 aa22.17■■□□□ 1.14
RAB39A-201ENST00000320578 PLBD2Q8NHP8 589 aa22.17■■□□□ 1.14
RAB39A-201ENST00000320578 C9orf78Q9NZ63 289 aaPredicted RBP22.17■■□□□ 1.14
RAB39A-201ENST00000320578 PNMA6EA0A0J9YXQ4 647 aa22.16■■□□□ 1.14
RAB39A-201ENST00000320578 NBPF26B4DH59 902 aa22.16■■□□□ 1.14
RAB39A-201ENST00000320578 NBPF14Q5TI25 921 aa22.16■■□□□ 1.14
RAB39A-201ENST00000320578 NBPF10Q6P3W6 841 aaKnown RBP22.16■■□□□ 1.14
RAB39A-201ENST00000320578 NBPF15Q8N660 670 aa22.16■■□□□ 1.14
RAB39A-201ENST00000320578 GRM8O00222 908 aa22.15■■□□□ 1.14
RAB39A-201ENST00000320578 PTCD1O75127 700 aaKnown RBP22.15■■□□□ 1.14
RAB39A-201ENST00000320578 IGKV5-2P06315 115 aa22.15■■□□□ 1.14
RAB39A-201ENST00000320578 BCL9LQ86UU0 1499 aa22.15■■□□□ 1.14
RAB39A-201ENST00000320578 ITGB4P16144 1822 aa22.14■■□□□ 1.14
RAB39A-201ENST00000320578 NEURL1BA8MQ27 555 aa22.14■■□□□ 1.13
RAB39A-201ENST00000320578 RAB11FIP3O75154 756 aa22.14■■□□□ 1.13
RAB39A-201ENST00000320578 PLEKHM2Q8IWE5 1019 aa22.14■■□□□ 1.13
RAB39A-201ENST00000320578 ASAP1Q9ULH1 1129 aa22.14■■□□□ 1.13
RAB39A-201ENST00000320578 COL15A1P39059 1388 aa22.14■■□□□ 1.13
RAB39A-201ENST00000320578 PPP1R42Q7Z4L9 355 aa22.13■■□□□ 1.13
RAB39A-201ENST00000320578 CWF19L2Q2TBE0 894 aaKnown RBP22.13■■□□□ 1.13
RAB39A-201ENST00000320578 NGLY1Q96IV0 654 aa22.13■■□□□ 1.13
RAB39A-201ENST00000320578 STARD3NLO95772 234 aa22.12■■□□□ 1.13
RAB39A-201ENST00000320578 GCKRQ14397 625 aa22.12■■□□□ 1.13
RAB39A-201ENST00000320578 IPO9Q96P70 1041 aaKnown RBP22.12■■□□□ 1.13
RAB39A-201ENST00000320578 HSP90AB4PQ58FF6 505 aa22.11■■□□□ 1.13
RAB39A-201ENST00000320578 LRRCC1Q9C099 1032 aa22.11■■□□□ 1.13
RAB39A-201ENST00000320578 OSBPL3Q9H4L5 887 aa22.11■■□□□ 1.13
RAB39A-201ENST00000320578 NOP58Q9Y2X3 529 aaKnown RBP22.1■■□□□ 1.13
RAB39A-201ENST00000320578 A1BGP04217 495 aa22.1■■□□□ 1.13
RAB39A-201ENST00000320578 MARCH10Q8NA82 808 aaPredicted RBP22.1■■□□□ 1.13
RAB39A-201ENST00000320578 MYD88Q99836 296 aa22.1■■□□□ 1.13
RAB39A-201ENST00000320578 SRGAP3O43295 1099 aa22.09■■□□□ 1.13
RAB39A-201ENST00000320578 EIF5BO60841 1220 aaKnown RBP22.09■■□□□ 1.13
RAB39A-201ENST00000320578 C8orf37Q96NL8 207 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms