RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 NCLP19338 710 aaKnown RBP18.95■□□□□ 0.62
SHROOM1-201ENST00000319854 CHRNA2Q15822 529 aa18.95■□□□□ 0.62
SHROOM1-201ENST00000319854 PPP1R42Q7Z4L9 355 aa18.95■□□□□ 0.62
SHROOM1-201ENST00000319854 USP26Q9BXU7 913 aa18.95■□□□□ 0.62
SHROOM1-201ENST00000319854 SRCIN1Q9C0H9 1055 aa18.95■□□□□ 0.62
SHROOM1-201ENST00000319854 SRGAP3O43295 1099 aa18.95■□□□□ 0.62
SHROOM1-201ENST00000319854 CAVIN1Q6NZI2 390 aaKnown RBP18.95■□□□□ 0.62
SHROOM1-201ENST00000319854 PIP4K2AP48426 406 aaPredicted RBP18.95■□□□□ 0.62
SHROOM1-201ENST00000319854 FOXD4L5Q5VV16 416 aaPredicted RBP18.95■□□□□ 0.62
SHROOM1-201ENST00000319854 MCTP1Q6DN14 999 aa18.95■□□□□ 0.62
SHROOM1-201ENST00000319854 FOXD4L4Q8WXT5 416 aaPredicted RBP18.95■□□□□ 0.62
SHROOM1-201ENST00000319854 NWD1Q149M9 1564 aa18.94■□□□□ 0.62
SHROOM1-201ENST00000319854 CSB-PGBD3P0DP91 1061 aa18.94■□□□□ 0.62
SHROOM1-201ENST00000319854 MX1P20591 662 aa18.94■□□□□ 0.62
SHROOM1-201ENST00000319854 PTMSP20962 102 aa18.94■□□□□ 0.62
SHROOM1-201ENST00000319854 ATP8B2P98198 1209 aa18.94■□□□□ 0.62
SHROOM1-201ENST00000319854 ARHGEF25Q86VW2 580 aa18.94■□□□□ 0.62
SHROOM1-201ENST00000319854 UQCRHLA0A096LP55 91 aa18.93■□□□□ 0.62
SHROOM1-201ENST00000319854 UQCRHP07919 91 aa18.93■□□□□ 0.62
SHROOM1-201ENST00000319854 OS9Q13438 667 aaPredicted RBP18.93■□□□□ 0.62
SHROOM1-201ENST00000319854 PKP1Q13835 747 aa18.93■□□□□ 0.62
SHROOM1-201ENST00000319854 UNC5CLQ8IV45 518 aa18.93■□□□□ 0.62
SHROOM1-201ENST00000319854 NOL7Q9UMY1 257 aaKnown RBP18.93■□□□□ 0.62
SHROOM1-201ENST00000319854 TERF1P54274 439 aa18.93■□□□□ 0.62
SHROOM1-201ENST00000319854 ZSCAN23Q3MJ62 389 aa18.93■□□□□ 0.62
SHROOM1-201ENST00000319854 CLEC17AQ6ZS10 378 aa18.93■□□□□ 0.62
SHROOM1-201ENST00000319854 ADGRL3Q9HAR2 1447 aa18.92■□□□□ 0.62
SHROOM1-201ENST00000319854 A0A0U1RQG5 324 aaPredicted RBP18.92■□□□□ 0.62
SHROOM1-201ENST00000319854 GOLGA6L22H0YM25 854 aa18.92■□□□□ 0.62
SHROOM1-201ENST00000319854 ANO2Q9NQ90 1003 aa18.92■□□□□ 0.62
SHROOM1-201ENST00000319854 NPHP4O75161 1426 aaPredicted RBP18.92■□□□□ 0.62
SHROOM1-201ENST00000319854 PRIM1P49642 420 aaKnown RBP18.92■□□□□ 0.62
SHROOM1-201ENST00000319854 ZNF445P59923 1031 aa18.92■□□□□ 0.62
SHROOM1-201ENST00000319854 IBTKQ9P2D0 1353 aaPredicted RBP18.92■□□□□ 0.62
SHROOM1-201ENST00000319854 HSPA2P54652 639 aa18.91■□□□□ 0.62
SHROOM1-201ENST00000319854 CWF19L2Q2TBE0 894 aaKnown RBP18.91■□□□□ 0.62
SHROOM1-201ENST00000319854 AKAP4Q5JQC9 854 aa18.91■□□□□ 0.62
SHROOM1-201ENST00000319854 DNAAF4Q8WXU2 420 aa18.91■□□□□ 0.62
SHROOM1-201ENST00000319854 RNMTO43148 476 aaKnown RBP18.91■□□□□ 0.62
SHROOM1-201ENST00000319854 ZNF500O60304 480 aaPredicted RBP18.91■□□□□ 0.62
SHROOM1-201ENST00000319854 MYL6BP14649 208 aa18.91■□□□□ 0.62
SHROOM1-201ENST00000319854 CHAMP1Q96JM3 812 aa18.91■□□□□ 0.62
SHROOM1-201ENST00000319854 LMBRD1Q9NUN5 540 aa18.91■□□□□ 0.62
SHROOM1-201ENST00000319854 RBM27Q9P2N5 1060 aaKnown RBP18.91■□□□□ 0.62
SHROOM1-201ENST00000319854 ERC2O15083 957 aa18.9■□□□□ 0.62
SHROOM1-201ENST00000319854 ATF3P18847 181 aa18.9■□□□□ 0.62
SHROOM1-201ENST00000319854 PDLIM2Q96JY6 352 aa18.9■□□□□ 0.62
SHROOM1-201ENST00000319854 C9orf78Q9NZ63 289 aaPredicted RBP18.9■□□□□ 0.62
SHROOM1-201ENST00000319854 MAP3K2Q9Y2U5 619 aa18.89■□□□□ 0.62
SHROOM1-201ENST00000319854 JARID2Q92833 1246 aaPredicted RBP18.89■□□□□ 0.61
SHROOM1-201ENST00000319854 REC8O95072 547 aa18.89■□□□□ 0.61
SHROOM1-201ENST00000319854 LTN1O94822 1766 aa18.89■□□□□ 0.61
SHROOM1-201ENST00000319854 PRDM10Q9NQV6 1147 aa18.88■□□□□ 0.61
SHROOM1-201ENST00000319854 PXDNQ92626 1479 aa18.88■□□□□ 0.61
SHROOM1-201ENST00000319854 RABEP1Q15276 862 aa18.88■□□□□ 0.61
SHROOM1-201ENST00000319854 ZGPATQ8N5A5 531 aaKnown RBP18.88■□□□□ 0.61
SHROOM1-201ENST00000319854 PA2G4Q9UQ80 394 aaKnown RBP18.88■□□□□ 0.61
SHROOM1-201ENST00000319854 SOS1Q07889 1333 aaPredicted RBP18.88■□□□□ 0.61
SHROOM1-201ENST00000319854 NEK4P51957 841 aa18.87■□□□□ 0.61
SHROOM1-201ENST00000319854 RAPGEF4Q8WZA2 1011 aa18.87■□□□□ 0.61
SHROOM1-201ENST00000319854 CEMIPQ8WUJ3 1361 aa18.87■□□□□ 0.61
SHROOM1-201ENST00000319854 HS1BP3Q53T59 392 aa18.87■□□□□ 0.61
SHROOM1-201ENST00000319854 RGPD2P0DJD1 1756 aa18.87■□□□□ 0.61
SHROOM1-201ENST00000319854 MARF1Q9Y4F3 1742 aaKnown RBP18.86■□□□□ 0.61
SHROOM1-201ENST00000319854 UPF3BQ9BZI7 483 aaKnown RBP18.86■□□□□ 0.61
SHROOM1-201ENST00000319854 BEND3Q5T5X7 828 aa18.86■□□□□ 0.61
SHROOM1-201ENST00000319854 NFATC2IPQ8NCF5 419 aa18.86■□□□□ 0.61
SHROOM1-201ENST00000319854 GPT2Q8TD30 523 aa18.86■□□□□ 0.61
SHROOM1-201ENST00000319854 C19orf44Q9H6X5 657 aa18.86■□□□□ 0.61
SHROOM1-201ENST00000319854 PALD1Q9ULE6 856 aa18.86■□□□□ 0.61
SHROOM1-201ENST00000319854 FOXD4L6Q3SYB3 417 aaPredicted RBP18.85■□□□□ 0.61
SHROOM1-201ENST00000319854 FOXD4L3Q6VB84 417 aaPredicted RBP18.85■□□□□ 0.61
SHROOM1-201ENST00000319854 IL25Q9H293 177 aa18.85■□□□□ 0.61
SHROOM1-201ENST00000319854 CHD2O14647 1828 aaKnown RBP18.85■□□□□ 0.61
SHROOM1-201ENST00000319854 DTNBO60941 627 aa18.85■□□□□ 0.61
SHROOM1-201ENST00000319854 AMOTQ4VCS5 1084 aa18.85■□□□□ 0.61
SHROOM1-201ENST00000319854 MAP7D2Q96T17 732 aa18.85■□□□□ 0.61
SHROOM1-201ENST00000319854 ZKSCAN5Q9Y2L8 839 aa18.85■□□□□ 0.61
SHROOM1-201ENST00000319854 GIGYF1O75420 1035 aaPredicted RBP18.85■□□□□ 0.61
SHROOM1-201ENST00000319854 DBF4Q9UBU7 674 aaPredicted RBP18.85■□□□□ 0.61
SHROOM1-201ENST00000319854 PRPF40AO75400 957 aaKnown RBP18.84■□□□□ 0.61
SHROOM1-201ENST00000319854 RHPN1Q8TCX5 695 aa18.84■□□□□ 0.61
SHROOM1-201ENST00000319854 SIL1Q9H173 461 aa18.84■□□□□ 0.61
SHROOM1-201ENST00000319854 NSFL1CQ9UNZ2 370 aaKnown RBP18.84■□□□□ 0.61
SHROOM1-201ENST00000319854 NFAT5O94916 1531 aa18.84■□□□□ 0.61
SHROOM1-201ENST00000319854 ST18O60284 1047 aa18.84■□□□□ 0.61
SHROOM1-201ENST00000319854 CYP2E1P05181 493 aaPredicted RBP18.84■□□□□ 0.61
SHROOM1-201ENST00000319854 TPRNQ4KMQ1 711 aa18.84■□□□□ 0.61
SHROOM1-201ENST00000319854 LARP6Q9BRS8 491 aaKnown RBP18.84■□□□□ 0.61
SHROOM1-201ENST00000319854 ESYT1Q9BSJ8 1104 aa18.83■□□□□ 0.61
SHROOM1-201ENST00000319854 CHMLP26374 656 aa18.83■□□□□ 0.6
SHROOM1-201ENST00000319854 SSH3Q8TE77 659 aa18.82■□□□□ 0.6
SHROOM1-201ENST00000319854 ZHX1Q9UKY1 873 aaPredicted RBP18.82■□□□□ 0.6
SHROOM1-201ENST00000319854 ADCY9O60503 1353 aa18.82■□□□□ 0.6
SHROOM1-201ENST00000319854 ERBB3P21860 1342 aa18.81■□□□□ 0.6
SHROOM1-201ENST00000319854 KLHDC4Q8TBB5 520 aa18.81■□□□□ 0.6
SHROOM1-201ENST00000319854 BABAM1Q9NWV8 329 aa18.81■□□□□ 0.6
SHROOM1-201ENST00000319854 OSBPL3Q9H4L5 887 aa18.81■□□□□ 0.6
SHROOM1-201ENST00000319854 TMEM63CQ9P1W3 806 aa18.81■□□□□ 0.6
SHROOM1-201ENST00000319854 DYNC1I1O14576 645 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms