RNA–Protein interactions for RNA: ENST00000315994.6

SH3PXD2A-201, Transcript of SH3 and PX domains 2A, humanhuman

TSL 1 (best)

Gene SH3PXD2A, Length 5,504 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-201ENST00000315994 BMP2KLQ5H9B9 411 aa15.18■□□□□ 0.02
SH3PXD2A-201ENST00000315994 TSPY26PQ9H489 355 aa15.18■□□□□ 0.02
SH3PXD2A-201ENST00000315994 RBM5P52756 815 aaKnown RBP eCLIP15.18■□□□□ 0.026e-20■■■■■ 37.2
SH3PXD2A-201ENST00000315994 EVI5LQ96CN4 794 aa15.18■□□□□ 0.02
SH3PXD2A-201ENST00000315994 ECHDC1Q9NTX5 307 aa15.18■□□□□ 0.02
SH3PXD2A-201ENST00000315994 TMEM2Q9UHN6 1383 aa15.17■□□□□ 0.02
SH3PXD2A-201ENST00000315994 PRPF40BQ6NWY9 871 aaKnown RBP15.17■□□□□ 0.02
SH3PXD2A-201ENST00000315994 IP6K1Q92551 441 aa15.17■□□□□ 0.02
SH3PXD2A-201ENST00000315994 PREX2Q70Z35 1606 aa15.17■□□□□ 0.02
SH3PXD2A-201ENST00000315994 EYA1Q99502 592 aa15.17■□□□□ 0.02
SH3PXD2A-201ENST00000315994 TTC37Q6PGP7 1564 aa15.17■□□□□ 0.02
SH3PXD2A-201ENST00000315994 IGHDP01880 384 aa15.17■□□□□ 0.02
SH3PXD2A-201ENST00000315994 GPTP24298 496 aa15.17■□□□□ 0.02
SH3PXD2A-201ENST00000315994 LRRC59Q96AG4 307 aaKnown RBP15.17■□□□□ 0.02
SH3PXD2A-201ENST00000315994 PLXNC1O60486 1568 aa15.17■□□□□ 0.02
SH3PXD2A-201ENST00000315994 ZCCHC11Q5TAX3 1644 aaKnown RBP15.16■□□□□ 0.02
SH3PXD2A-201ENST00000315994 ATP5J2-PTCD1G3V325 749 aa15.16■□□□□ 0.02
SH3PXD2A-201ENST00000315994 CEBPZQ03701 1054 aaKnown RBP15.16■□□□□ 0.02
SH3PXD2A-201ENST00000315994 MAP3K12Q12852 859 aa15.16■□□□□ 0.02
SH3PXD2A-201ENST00000315994 MAP3K19Q56UN5 1328 aa15.16■□□□□ 0.02
SH3PXD2A-201ENST00000315994 ATP2B2Q01814 1243 aa15.16■□□□□ 0.02
SH3PXD2A-201ENST00000315994 UBE3BQ7Z3V4 1068 aa15.16■□□□□ 0.02
SH3PXD2A-201ENST00000315994 ALDH1L1O75891 902 aa15.16■□□□□ 0.02
SH3PXD2A-201ENST00000315994 WASF1Q92558 559 aa15.16■□□□□ 0.02
SH3PXD2A-201ENST00000315994 IL2RBP14784 551 aa15.15■□□□□ 0.02
SH3PXD2A-201ENST00000315994 YEATS2Q9ULM3 1422 aa15.15■□□□□ 0.02
SH3PXD2A-201ENST00000315994 KDM5DQ9BY66 1539 aa15.15■□□□□ 0.02
SH3PXD2A-201ENST00000315994 HSPA2P54652 639 aa15.15■□□□□ 0.02
SH3PXD2A-201ENST00000315994 PDE4CQ08493 712 aa15.15■□□□□ 0.02
SH3PXD2A-201ENST00000315994 CDK5RAP3Q96JB5 506 aa15.15■□□□□ 0.02
SH3PXD2A-201ENST00000315994 SBNO1A3KN83 1393 aa15.15■□□□□ 0.02
SH3PXD2A-201ENST00000315994 SKAP1Q86WV1 359 aa15.15■□□□□ 0.02
SH3PXD2A-201ENST00000315994 GOLGA6L1Q8N7Z2 621 aa15.15■□□□□ 0.02
SH3PXD2A-201ENST00000315994 ANXA1P04083 346 aa15.15■□□□□ 0.02
SH3PXD2A-201ENST00000315994 NUCB1Q02818 461 aa15.15■□□□□ 0.02
SH3PXD2A-201ENST00000315994 HMGB1P09429 215 aaKnown RBP15.14■□□□□ 0.01
SH3PXD2A-201ENST00000315994 SOGA3Q5TF21 947 aa15.14■□□□□ 0.01
SH3PXD2A-201ENST00000315994 RNF214Q8ND24 703 aa15.14■□□□□ 0.01
SH3PXD2A-201ENST00000315994 ANKIB1Q9P2G1 1089 aa15.14■□□□□ 0.01
SH3PXD2A-201ENST00000315994 CCDC39Q9UFE4 941 aa15.14■□□□□ 0.01
SH3PXD2A-201ENST00000315994 NOL7Q9UMY1 257 aaKnown RBP15.14■□□□□ 0.01
SH3PXD2A-201ENST00000315994 SOS1Q07889 1333 aaPredicted RBP15.14■□□□□ 0.01
SH3PXD2A-201ENST00000315994 FAM43AQ8N2R8 423 aa15.14■□□□□ 0.01
SH3PXD2A-201ENST00000315994 CABLES1Q8TDN4 633 aa15.14■□□□□ 0.01
SH3PXD2A-201ENST00000315994 CFAP45Q9UL16 551 aa15.14■□□□□ 0.01
SH3PXD2A-201ENST00000315994 TTC22Q5TAA0 569 aa15.14■□□□□ 0.01
SH3PXD2A-201ENST00000315994 KSR2Q6VAB6 950 aa15.14■□□□□ 0.01
SH3PXD2A-201ENST00000315994 XAGE3Q8WTP9 111 aa15.14■□□□□ 0.01
SH3PXD2A-201ENST00000315994 CDC5LQ99459 802 aaKnown RBP15.14■□□□□ 0.01
SH3PXD2A-201ENST00000315994 ZNF287Q9HBT7 754 aa15.14■□□□□ 0.01
SH3PXD2A-201ENST00000315994 A0A0U1RQG5 324 aaPredicted RBP15.14■□□□□ 0.01
SH3PXD2A-201ENST00000315994 SIRT1Q96EB6 747 aa15.14■□□□□ 0.01
SH3PXD2A-201ENST00000315994 PHACTR3Q96KR7 559 aa15.14■□□□□ 0.01
SH3PXD2A-201ENST00000315994 MEIS3Q99687 375 aa15.14■□□□□ 0.01
SH3PXD2A-201ENST00000315994 ME1P48163 572 aa15.13■□□□□ 0.01
SH3PXD2A-201ENST00000315994 CCDC70Q6NSX1 233 aa15.13■□□□□ 0.01
SH3PXD2A-201ENST00000315994 ZNF592Q92610 1267 aa15.13■□□□□ 0.01
SH3PXD2A-201ENST00000315994 RPGRQ92834 1020 aaKnown RBP15.13■□□□□ 0.01
SH3PXD2A-201ENST00000315994 AK7Q96M32 723 aa15.13■□□□□ 0.01
SH3PXD2A-201ENST00000315994 SLC39A6Q13433 755 aa15.13■□□□□ 0.01
SH3PXD2A-201ENST00000315994 HOMER1Q86YM7 354 aa15.13■□□□□ 0.01
SH3PXD2A-201ENST00000315994 VAMP4O75379 141 aa15.13■□□□□ 0.01
SH3PXD2A-201ENST00000315994 TTF1Q15361 905 aaPredicted RBP15.13■□□□□ 0.01
SH3PXD2A-201ENST00000315994 LDHAL6AQ6ZMR3 332 aa15.13■□□□□ 0.01
SH3PXD2A-201ENST00000315994 SH2B1Q9NRF2 756 aaPredicted RBP15.13■□□□□ 0.01
SH3PXD2A-201ENST00000315994 MLH3Q9UHC1 1453 aa15.13■□□□□ 0.01
SH3PXD2A-201ENST00000315994 COPS6Q7L5N1 327 aa15.12■□□□□ 0.01
SH3PXD2A-201ENST00000315994 ANKRD44Q8N8A2 993 aa15.12■□□□□ 0.01
SH3PXD2A-201ENST00000315994 NAPBQ9H115 298 aa15.12■□□□□ 0.01
SH3PXD2A-201ENST00000315994 PTPRTO14522 1441 aa15.12■□□□□ 0.01
SH3PXD2A-201ENST00000315994 UBAP1LF5GYI3 381 aa15.12■□□□□ 0.01
SH3PXD2A-201ENST00000315994 DCAF5Q96JK2 942 aa15.12■□□□□ 0.01
SH3PXD2A-201ENST00000315994 TBC1D9Q6ZT07 1266 aa15.12■□□□□ 0.01
SH3PXD2A-201ENST00000315994 CCAR2Q8N163 923 aaKnown RBP15.12■□□□□ 0.01
SH3PXD2A-201ENST00000315994 SPATA32Q96LK8 384 aa15.12■□□□□ 0.01
SH3PXD2A-201ENST00000315994 IL13P35225 146 aa15.12■□□□□ 0.01
SH3PXD2A-201ENST00000315994 ZSCAN29Q8IWY8 852 aaPredicted RBP15.12■□□□□ 0.01
SH3PXD2A-201ENST00000315994 RHPN1Q8TCX5 695 aa15.12■□□□□ 0.01
SH3PXD2A-201ENST00000315994 MAGI2Q86UL8 1455 aa15.11■□□□□ 0.01
SH3PXD2A-201ENST00000315994 CCDC192P0DO97 292 aa15.11■□□□□ 0.01
SH3PXD2A-201ENST00000315994 SMARCC1Q92922 1105 aaPredicted RBP15.11■□□□□ 0.01
SH3PXD2A-201ENST00000315994 FAM13BQ9NYF5 915 aa15.11■□□□□ 0.01
SH3PXD2A-201ENST00000315994 KDM5AP29375 1690 aaKnown RBP15.11■□□□□ 0.01
SH3PXD2A-201ENST00000315994 USP5P45974 858 aa15.11■□□□□ 0.01
SH3PXD2A-201ENST00000315994 PIP4K2AP48426 406 aaPredicted RBP15.11■□□□□ 0.01
SH3PXD2A-201ENST00000315994 DZIP1Q86YF9 867 aaKnown RBP15.11■□□□□ 0.01
SH3PXD2A-201ENST00000315994 UPF3BQ9BZI7 483 aaKnown RBP15.11■□□□□ 0.01
SH3PXD2A-201ENST00000315994 TNMDQ9H2S6 317 aa15.11■□□□□ 0.01
SH3PXD2A-201ENST00000315994 TRIM5Q9C035 493 aa15.11■□□□□ 0.01
SH3PXD2A-201ENST00000315994 GRM8O00222 908 aa15.1■□□□□ 0.01
SH3PXD2A-201ENST00000315994 DDB1Q16531 1140 aa15.1■□□□□ 0.01
SH3PXD2A-201ENST00000315994 PCDH11XQ9BZA7 1347 aa15.1■□□□□ 0.01
SH3PXD2A-201ENST00000315994 PCDH11YQ9BZA8 1340 aa15.1■□□□□ 0.01
SH3PXD2A-201ENST00000315994 ATP8B2P98198 1209 aa15.1■□□□□ 0.01
SH3PXD2A-201ENST00000315994 TMOD2Q9NZR1 351 aa15.1■□□□□ 0.01
SH3PXD2A-201ENST00000315994 PCDHB15Q9Y5E8 787 aa15.1■□□□□ 0.01
SH3PXD2A-201ENST00000315994 R3HCC1Q9Y3T6 440 aaKnown RBP15.1■□□□□ 0.01
SH3PXD2A-201ENST00000315994 RNMTO43148 476 aaKnown RBP15.1■□□□□ 0.01
SH3PXD2A-201ENST00000315994 MCM4P33991 863 aa15.1■□□□□ 0.01
SH3PXD2A-201ENST00000315994 EPS15P42566 896 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms