RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 PROM2Q8N271 834 aa10.39□□□□□ -0.75
CDC42-201ENST00000315554 RUNDC1Q96C34 613 aa10.39□□□□□ -0.75
CDC42-201ENST00000315554 SGIP1Q9BQI5 828 aa10.39□□□□□ -0.75
CDC42-201ENST00000315554 PNNQ9H307 717 aaKnown RBP10.39□□□□□ -0.75
CDC42-201ENST00000315554 ASAP1Q9ULH1 1129 aa10.39□□□□□ -0.75
CDC42-201ENST00000315554 ITGB4P16144 1822 aa10.39□□□□□ -0.75
CDC42-201ENST00000315554 RIPK4P57078 832 aa10.38□□□□□ -0.75
CDC42-201ENST00000315554 TXNRD1Q16881 649 aa10.38□□□□□ -0.75
CDC42-201ENST00000315554 RTF1Q92541 710 aaKnown RBP10.38□□□□□ -0.75
CDC42-201ENST00000315554 SLC52A2Q9HAB3 445 aa10.38□□□□□ -0.75
CDC42-201ENST00000315554 PALLDQ8WX93 1383 aa10.38□□□□□ -0.75
CDC42-201ENST00000315554 APAF1O14727 1248 aa10.37□□□□□ -0.75
CDC42-201ENST00000315554 PLSCR1O15162 318 aa10.37□□□□□ -0.75
CDC42-201ENST00000315554 TMPOP42166 694 aaKnown RBP10.37□□□□□ -0.75
CDC42-201ENST00000315554 SLC39A6Q13433 755 aa10.37□□□□□ -0.75
CDC42-201ENST00000315554 ATG3Q9NT62 314 aa10.37□□□□□ -0.75
CDC42-201ENST00000315554 SCN11AQ9UI33 1791 aa10.37□□□□□ -0.75
CDC42-201ENST00000315554 TEFQ10587 303 aa10.36□□□□□ -0.75
CDC42-201ENST00000315554 LRRC4BQ9NT99 713 aa10.36□□□□□ -0.75
CDC42-201ENST00000315554 TRIM35Q9UPQ4 493 aa10.36□□□□□ -0.75
CDC42-201ENST00000315554 PTCD1O75127 700 aaKnown RBP10.36□□□□□ -0.75
CDC42-201ENST00000315554 PLCB2Q00722 1185 aa10.36□□□□□ -0.75
CDC42-201ENST00000315554 ANO8Q9HCE9 1232 aaPredicted RBP10.36□□□□□ -0.75
CDC42-201ENST00000315554 CCNL1Q9UK58 526 aaPredicted RBP10.36□□□□□ -0.75
CDC42-201ENST00000315554 SALL2Q9Y467 1007 aaPredicted RBP10.36□□□□□ -0.75
CDC42-201ENST00000315554 DLG5Q8TDM6 1919 aa10.35□□□□□ -0.75
CDC42-201ENST00000315554 ADAMTS7Q9UKP4 1686 aa10.35□□□□□ -0.75
CDC42-201ENST00000315554 MRC1P22897 1456 aa10.35□□□□□ -0.75
CDC42-201ENST00000315554 CEMIPQ8WUJ3 1361 aa10.35□□□□□ -0.75
CDC42-201ENST00000315554 PSDA5PKW4 1024 aaPredicted RBP10.35□□□□□ -0.75
CDC42-201ENST00000315554 KCNQ3O43525 872 aa10.35□□□□□ -0.75
CDC42-201ENST00000315554 SMARCC1Q92922 1105 aaPredicted RBP10.35□□□□□ -0.75
CDC42-201ENST00000315554 MIS18AQ9NYP9 233 aa10.35□□□□□ -0.75
CDC42-201ENST00000315554 VIRMAQ69YN4 1812 aaKnown RBP10.34□□□□□ -0.75
CDC42-201ENST00000315554 NUP188Q5SRE5 1749 aa10.34□□□□□ -0.75
CDC42-201ENST00000315554 RREB1Q92766 1687 aa10.34□□□□□ -0.75
CDC42-201ENST00000315554 CCER2I3L3R5 266 aa10.34□□□□□ -0.75
CDC42-201ENST00000315554 HTATSF1O43719 755 aaKnown RBP10.34□□□□□ -0.75
CDC42-201ENST00000315554 SLC4A9Q96Q91 983 aa10.34□□□□□ -0.75
CDC42-201ENST00000315554 LOC102724428A0A0B4J2F2 783 aa10.33□□□□□ -0.76
CDC42-201ENST00000315554 BTBD11A6QL63 1104 aa10.33□□□□□ -0.76
CDC42-201ENST00000315554 ATP6V1AP38606 617 aa10.33□□□□□ -0.76
CDC42-201ENST00000315554 SIK1P57059 783 aa10.33□□□□□ -0.76
CDC42-201ENST00000315554 ITPK1Q13572 414 aa10.33□□□□□ -0.76
CDC42-201ENST00000315554 R3HDM1Q15032 1099 aaKnown RBP10.33□□□□□ -0.76
CDC42-201ENST00000315554 ZNF827Q17R98 1081 aa10.33□□□□□ -0.76
CDC42-201ENST00000315554 RGPD3A6NKT7 1758 aaPredicted RBP10.33□□□□□ -0.76
CDC42-201ENST00000315554 RGPD4Q7Z3J3 1758 aa10.33□□□□□ -0.76
CDC42-201ENST00000315554 LY75O60449 1722 aa10.32□□□□□ -0.76
CDC42-201ENST00000315554 SMIM5Q71RC9 77 aa10.32□□□□□ -0.76
CDC42-201ENST00000315554 TTC5Q8N0Z6 440 aa10.32□□□□□ -0.76
CDC42-201ENST00000315554 LAS1LQ9Y4W2 734 aaKnown RBP10.32□□□□□ -0.76
CDC42-201ENST00000315554 LMOD3Q0VAK6 560 aa10.31□□□□□ -0.76
CDC42-201ENST00000315554 SLC27A3Q5K4L6 730 aa10.31□□□□□ -0.76
CDC42-201ENST00000315554 NBPF14Q5TI25 921 aa10.31□□□□□ -0.76
CDC42-201ENST00000315554 LINC00116Q8NCU8 138 aa10.31□□□□□ -0.76
CDC42-201ENST00000315554 STK32BQ9NY57 414 aa10.31□□□□□ -0.76
CDC42-201ENST00000315554 SIPA1L3O60292 1781 aaPredicted RBP10.31□□□□□ -0.76
CDC42-201ENST00000315554 KCPQ6ZWJ8 1503 aa10.31□□□□□ -0.76
CDC42-201ENST00000315554 SNPHO15079 494 aa10.3□□□□□ -0.76
CDC42-201ENST00000315554 TAF7Q15545 349 aaPredicted RBP10.3□□□□□ -0.76
CDC42-201ENST00000315554 ZNF790Q6PG37 636 aa10.3□□□□□ -0.76
CDC42-201ENST00000315554 DNAJC10Q8IXB1 793 aa10.3□□□□□ -0.76
CDC42-201ENST00000315554 ZNF496Q96IT1 587 aaPredicted RBP10.3□□□□□ -0.76
CDC42-201ENST00000315554 PAPPAQ13219 1627 aa10.3□□□□□ -0.76
CDC42-201ENST00000315554 PRAMEF22A3QJZ6 481 aa10.3□□□□□ -0.76
CDC42-201ENST00000315554 SLC15A2Q16348 729 aa10.3□□□□□ -0.76
CDC42-201ENST00000315554 TPRNQ4KMQ1 711 aa10.3□□□□□ -0.76
CDC42-201ENST00000315554 RASEFQ8IZ41 740 aa10.3□□□□□ -0.76
CDC42-201ENST00000315554 PDGFDQ9GZP0 370 aaPredicted RBP10.3□□□□□ -0.76
CDC42-201ENST00000315554 AMIGO3Q86WK7 504 aa10.29□□□□□ -0.76
CDC42-201ENST00000315554 TSPYL4Q9UJ04 414 aa10.29□□□□□ -0.76
CDC42-201ENST00000315554 C5P01031 1676 aa10.28□□□□□ -0.76
CDC42-201ENST00000315554 PHF14O94880 888 aa10.28□□□□□ -0.76
CDC42-201ENST00000315554 AK7Q96M32 723 aa10.28□□□□□ -0.76
CDC42-201ENST00000315554 FMNL2Q96PY5 1086 aa10.28□□□□□ -0.76
CDC42-201ENST00000315554 TFCP2L1Q9NZI6 479 aa10.28□□□□□ -0.76
CDC42-201ENST00000315554 TJP1Q07157 1748 aa10.27□□□□□ -0.76
CDC42-201ENST00000315554 GNPATO15228 680 aa10.27□□□□□ -0.77
CDC42-201ENST00000315554 KRT24Q2M2I5 525 aa10.27□□□□□ -0.77
CDC42-201ENST00000315554 WWC1Q8IX03 1113 aa10.27□□□□□ -0.77
CDC42-201ENST00000315554 HEG1Q9ULI3 1381 aa10.27□□□□□ -0.77
CDC42-201ENST00000315554 C4BP0C0L5 1744 aa10.27□□□□□ -0.77
CDC42-201ENST00000315554 UBR2Q8IWV8 1755 aa10.26□□□□□ -0.77
CDC42-201ENST00000315554 PLCG2P16885 1265 aa10.26□□□□□ -0.77
CDC42-201ENST00000315554 CRKLP46109 303 aaKnown RBP10.26□□□□□ -0.77
CDC42-201ENST00000315554 PIP4K2AP48426 406 aaPredicted RBP10.26□□□□□ -0.77
CDC42-201ENST00000315554 EIF4A1P60842 406 aaKnown RBP10.26□□□□□ -0.77
CDC42-201ENST00000315554 TAF1LQ8IZX4 1826 aa10.26□□□□□ -0.77
CDC42-201ENST00000315554 KDM3BQ7LBC6 1761 aa10.26□□□□□ -0.77
CDC42-201ENST00000315554 PNPLA7Q6ZV29 1317 aa10.26□□□□□ -0.77
CDC42-201ENST00000315554 CHL1O00533 1208 aa10.25□□□□□ -0.77
CDC42-201ENST00000315554 CYP19A1P11511 503 aaPredicted RBP10.25□□□□□ -0.77
CDC42-201ENST00000315554 TSR2Q969E8 191 aaKnown RBP10.25□□□□□ -0.77
CDC42-201ENST00000315554 MBIPQ9NS73 344 aa10.25□□□□□ -0.77
CDC42-201ENST00000315554 USP16Q9Y5T5 823 aa10.25□□□□□ -0.77
CDC42-201ENST00000315554 ZBTB7AO95365 584 aa10.24□□□□□ -0.77
CDC42-201ENST00000315554 A1BGP04217 495 aa10.24□□□□□ -0.77
CDC42-201ENST00000315554 CANXP27824 592 aaKnown RBP10.24□□□□□ -0.77
CDC42-201ENST00000315554 IRX5P78411 483 aaPredicted RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms