RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 KAZALD1Q96I82 304 aa9.98□□□□□ -0.81
CNOT4-201ENST00000315544 RBM33Q96EV2 1170 aaKnown RBP9.98□□□□□ -0.81
CNOT4-201ENST00000315544 SBF1O95248 1867 aa9.98□□□□□ -0.81
CNOT4-201ENST00000315544 PRKAR2BP31323 418 aa9.97□□□□□ -0.81
CNOT4-201ENST00000315544 PAPPA2Q9BXP8 1791 aa9.97□□□□□ -0.81
CNOT4-201ENST00000315544 MCM4P33991 863 aa9.97□□□□□ -0.81
CNOT4-201ENST00000315544 FER1L6Q2WGJ9 1857 aa9.97□□□□□ -0.81
CNOT4-201ENST00000315544 PTPRCP08575 1304 aa9.97□□□□□ -0.81
CNOT4-201ENST00000315544 RBM6P78332 1123 aaKnown RBP9.97□□□□□ -0.81
CNOT4-201ENST00000315544 MTX1Q13505 466 aa9.97□□□□□ -0.81
CNOT4-201ENST00000315544 OTUD7AQ8TE49 926 aaPredicted RBP9.97□□□□□ -0.81
CNOT4-201ENST00000315544 TTC14Q96N46 770 aa9.97□□□□□ -0.81
CNOT4-201ENST00000315544 TTC22Q5TAA0 569 aa9.96□□□□□ -0.81
CNOT4-201ENST00000315544 FAM43AQ8N2R8 423 aa9.96□□□□□ -0.81
CNOT4-201ENST00000315544 PI4K2BQ8TCG2 481 aa9.96□□□□□ -0.81
CNOT4-201ENST00000315544 GCC1Q96CN9 775 aa9.96□□□□□ -0.81
CNOT4-201ENST00000315544 FUCA2Q9BTY2 467 aa9.96□□□□□ -0.81
CNOT4-201ENST00000315544 MINK1Q8N4C8 1332 aaPredicted RBP9.96□□□□□ -0.81
CNOT4-201ENST00000315544 EPB41L2O43491 1005 aaKnown RBP9.96□□□□□ -0.81
CNOT4-201ENST00000315544 RIPK4P57078 832 aa9.96□□□□□ -0.81
CNOT4-201ENST00000315544 GJD4Q96KN9 370 aaPredicted RBP9.96□□□□□ -0.81
CNOT4-201ENST00000315544 PDIA6Q15084 440 aa9.96□□□□□ -0.82
CNOT4-201ENST00000315544 THUMPD2Q9BTF0 503 aaKnown RBP9.96□□□□□ -0.82
CNOT4-201ENST00000315544 HTATSF1O43719 755 aaKnown RBP9.95□□□□□ -0.82
CNOT4-201ENST00000315544 CARD10Q9BWT7 1032 aa9.95□□□□□ -0.82
CNOT4-201ENST00000315544 CCDC125Q86Z20 511 aa9.95□□□□□ -0.82
CNOT4-201ENST00000315544 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.95□□□□□ -0.82
CNOT4-201ENST00000315544 GAS2L2Q8NHY3 880 aa9.95□□□□□ -0.82
CNOT4-201ENST00000315544 NEDD4P46934 1319 aa9.95□□□□□ -0.82
CNOT4-201ENST00000315544 NEFMP07197 916 aa9.95□□□□□ -0.82
CNOT4-201ENST00000315544 BCL2L13Q9BXK5 485 aa9.95□□□□□ -0.82
CNOT4-201ENST00000315544 AXIN2Q9Y2T1 843 aa9.95□□□□□ -0.82
CNOT4-201ENST00000315544 THSD7BQ9C0I4 1608 aa9.95□□□□□ -0.82
CNOT4-201ENST00000315544 AOX1Q06278 1338 aa9.94□□□□□ -0.82
CNOT4-201ENST00000315544 ZNF445P59923 1031 aa9.94□□□□□ -0.82
CNOT4-201ENST00000315544 PKP1Q13835 747 aa9.94□□□□□ -0.82
CNOT4-201ENST00000315544 TMEM87AQ8NBN3 555 aa9.94□□□□□ -0.82
CNOT4-201ENST00000315544 IL17REQ8NFR9 667 aa9.94□□□□□ -0.82
CNOT4-201ENST00000315544 IP6K1Q92551 441 aa9.94□□□□□ -0.82
CNOT4-201ENST00000315544 TERF2IPQ9NYB0 399 aa9.94□□□□□ -0.82
CNOT4-201ENST00000315544 MAST2Q6P0Q8 1798 aa9.93□□□□□ -0.82
CNOT4-201ENST00000315544 KCNH5Q8NCM2 988 aa9.93□□□□□ -0.82
CNOT4-201ENST00000315544 LMBRD1Q9NUN5 540 aa9.93□□□□□ -0.82
CNOT4-201ENST00000315544 TRPC5Q9UL62 973 aaPredicted RBP9.93□□□□□ -0.82
CNOT4-201ENST00000315544 CIZ1Q9ULV3 898 aaPredicted RBP9.93□□□□□ -0.82
CNOT4-201ENST00000315544 CALD1Q05682 793 aaKnown RBP9.93□□□□□ -0.82
CNOT4-201ENST00000315544 MTHFSDQ2M296 383 aaKnown RBP9.93□□□□□ -0.82
CNOT4-201ENST00000315544 ESCO1Q5FWF5 840 aa9.93□□□□□ -0.82
CNOT4-201ENST00000315544 G2E3Q7L622 706 aa9.93□□□□□ -0.82
CNOT4-201ENST00000315544 KLHL34Q8N239 644 aa9.93□□□□□ -0.82
CNOT4-201ENST00000315544 CACNA1SQ13698 1873 aa9.93□□□□□ -0.82
CNOT4-201ENST00000315544 CHGAP10645 457 aaKnown RBP9.92□□□□□ -0.82
CNOT4-201ENST00000315544 UPF1Q92900 1129 aaKnown RBP eCLIP9.92□□□□□ -0.82
CNOT4-201ENST00000315544 RBM42Q9BTD8 480 aaKnown RBP9.92□□□□□ -0.82
CNOT4-201ENST00000315544 C22orf23Q9BZE7 217 aa9.92□□□□□ -0.82
CNOT4-201ENST00000315544 GCP02774 474 aa9.92□□□□□ -0.82
CNOT4-201ENST00000315544 TNPO1Q92973 898 aaKnown RBP9.92□□□□□ -0.82
CNOT4-201ENST00000315544 LAS1LQ9Y4W2 734 aaKnown RBP9.92□□□□□ -0.82
CNOT4-201ENST00000315544 MYH2Q9UKX2 1941 aa9.92□□□□□ -0.82
CNOT4-201ENST00000315544 TNRC6CQ9HCJ0 1690 aaKnown RBP9.92□□□□□ -0.82
CNOT4-201ENST00000315544 C16orf71Q8IYS4 520 aaPredicted RBP9.92□□□□□ -0.82
CNOT4-201ENST00000315544 GPT2Q8TD30 523 aa9.92□□□□□ -0.82
CNOT4-201ENST00000315544 PANK2Q9BZ23 570 aa9.92□□□□□ -0.82
CNOT4-201ENST00000315544 MYH13Q9UKX3 1938 aa9.91□□□□□ -0.82
CNOT4-201ENST00000315544 RWDD1Q9H446 243 aaPredicted RBP9.91□□□□□ -0.82
CNOT4-201ENST00000315544 RIC1Q4ADV7 1423 aa9.91□□□□□ -0.82
CNOT4-201ENST00000315544 ATAD5Q96QE3 1844 aa9.91□□□□□ -0.82
CNOT4-201ENST00000315544 NBR1Q14596 966 aa9.91□□□□□ -0.82
CNOT4-201ENST00000315544 HSP90AB2PQ58FF8 381 aa9.91□□□□□ -0.82
CNOT4-201ENST00000315544 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.91□□□□□ -0.825e-9■■■■■ 32.1
CNOT4-201ENST00000315544 SNED1Q8TER0 1413 aa9.91□□□□□ -0.82
CNOT4-201ENST00000315544 SSH3Q8TE77 659 aa9.9□□□□□ -0.82
CNOT4-201ENST00000315544 EYA1Q99502 592 aa9.9□□□□□ -0.82
CNOT4-201ENST00000315544 NSFL1CQ9UNZ2 370 aaKnown RBP9.9□□□□□ -0.82
CNOT4-201ENST00000315544 CDCA7Q9BWT1 371 aaPredicted RBP9.9□□□□□ -0.82
CNOT4-201ENST00000315544 CASP7P55210 303 aa9.9□□□□□ -0.83
CNOT4-201ENST00000315544 MED23Q9ULK4 1368 aa9.89□□□□□ -0.83
CNOT4-201ENST00000315544 U2AF1L5P0DN76 240 aaPredicted RBP9.89□□□□□ -0.83
CNOT4-201ENST00000315544 U2AF1Q01081 240 aaKnown RBP eCLIP9.89□□□□□ -0.833e-20■■■■■ 41.5
CNOT4-201ENST00000315544 FOXO3O43524 673 aa9.89□□□□□ -0.83
CNOT4-201ENST00000315544 HOXC9P31274 260 aa9.89□□□□□ -0.83
CNOT4-201ENST00000315544 CLCN1P35523 988 aa9.89□□□□□ -0.83
CNOT4-201ENST00000315544 USP44Q9H0E7 712 aa9.89□□□□□ -0.83
CNOT4-201ENST00000315544 RBBP6Q7Z6E9 1792 aaKnown RBP9.89□□□□□ -0.83
CNOT4-201ENST00000315544 GREB1LQ9C091 1923 aaPredicted RBP9.89□□□□□ -0.83
CNOT4-201ENST00000315544 PALLDQ8WX93 1383 aa9.88□□□□□ -0.83
CNOT4-201ENST00000315544 RRS1Q15050 365 aaKnown RBP9.88□□□□□ -0.83
CNOT4-201ENST00000315544 POLR3GLQ9BT43 218 aa9.88□□□□□ -0.83
CNOT4-201ENST00000315544 GNAI1P63096 354 aa9.88□□□□□ -0.83
CNOT4-201ENST00000315544 STK26Q9P289 416 aa9.88□□□□□ -0.83
CNOT4-201ENST00000315544 SDSP20132 328 aa9.87□□□□□ -0.83
CNOT4-201ENST00000315544 CAMKK2Q96RR4 588 aa9.87□□□□□ -0.83
CNOT4-201ENST00000315544 MEIS3Q99687 375 aa9.87□□□□□ -0.83
CNOT4-201ENST00000315544 ALDH8A1Q9H2A2 487 aaPredicted RBP9.87□□□□□ -0.83
CNOT4-201ENST00000315544 PNMA6EA0A0J9YXQ4 647 aa9.87□□□□□ -0.83
CNOT4-201ENST00000315544 HSP90AB1P08238 724 aaKnown RBP9.87□□□□□ -0.83
CNOT4-201ENST00000315544 TWISTNBQ3B726 338 aaPredicted RBP9.87□□□□□ -0.83
CNOT4-201ENST00000315544 DCTN1Q14203 1278 aa9.86□□□□□ -0.83
CNOT4-201ENST00000315544 RTL5Q5HYW3 569 aaPredicted RBP9.86□□□□□ -0.83
CNOT4-201ENST00000315544 SGIP1Q9BQI5 828 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms