RNA–Protein interactions for RNA: ENST00000314358.9

KDM3B-201, Transcript of lysine demethylase 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3B, Length 6,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-201ENST00000314358 PRPF4BQ13523 1007 aaKnown RBP24.34■■□□□ 1.49
KDM3B-201ENST00000314358 SLC52A1Q9NWF4 448 aa24.34■■□□□ 1.49
KDM3B-201ENST00000314358 LARP1Q6PKG0 1096 aaKnown RBP24.34■■□□□ 1.49
KDM3B-201ENST00000314358 WASF1Q92558 559 aa24.34■■□□□ 1.49
KDM3B-201ENST00000314358 RANBP6O60518 1105 aaKnown RBP24.34■■□□□ 1.49
KDM3B-201ENST00000314358 PPP1R12BO60237 982 aaPredicted RBP24.33■■□□□ 1.49
KDM3B-201ENST00000314358 ZSWIM4Q9H7M6 989 aa24.33■■□□□ 1.49
KDM3B-201ENST00000314358 PRDM11Q9NQV5 511 aa24.33■■□□□ 1.49
KDM3B-201ENST00000314358 GTF2F1P35269 517 aaKnown RBP eCLIP24.33■■□□□ 1.499e-12■■■■□ 21.2
KDM3B-201ENST00000314358 CCDC96Q2M329 555 aa24.33■■□□□ 1.49
KDM3B-201ENST00000314358 ATP2C2O75185 946 aa24.33■■□□□ 1.49
KDM3B-201ENST00000314358 CCDC184Q52MB2 194 aa24.33■■□□□ 1.49
KDM3B-201ENST00000314358 COMMD10Q9Y6G5 202 aa24.33■■□□□ 1.49
KDM3B-201ENST00000314358 MCM10Q7L590 875 aa24.33■■□□□ 1.48
KDM3B-201ENST00000314358 FAM107BQ9H098 131 aa24.32■■□□□ 1.48
KDM3B-201ENST00000314358 MMRN2Q9H8L6 949 aa24.32■■□□□ 1.48
KDM3B-201ENST00000314358 USP25Q9UHP3 1055 aa24.32■■□□□ 1.48
KDM3B-201ENST00000314358 HLTFQ14527 1009 aaKnown RBP eCLIP24.32■■□□□ 1.48
KDM3B-201ENST00000314358 ANKLE2Q86XL3 938 aa24.32■■□□□ 1.48
KDM3B-201ENST00000314358 TSG101Q99816 390 aa24.32■■□□□ 1.48
KDM3B-201ENST00000314358 PRKCSHP14314 528 aaPredicted RBP24.32■■□□□ 1.48
KDM3B-201ENST00000314358 CCDC8Q9H0W5 538 aaPredicted RBP24.32■■□□□ 1.48
KDM3B-201ENST00000314358 TMCO5BA8MYB1 307 aa24.31■■□□□ 1.48
KDM3B-201ENST00000314358 SPECC1Q5M775 1068 aa24.31■■□□□ 1.48
KDM3B-201ENST00000314358 DAPK1P53355 1430 aa24.31■■□□□ 1.48
KDM3B-201ENST00000314358 CGNQ9P2M7 1197 aaKnown RBP24.31■■□□□ 1.48
KDM3B-201ENST00000314358 CETN2P41208 172 aa24.31■■□□□ 1.48
KDM3B-201ENST00000314358 ERBINQ96RT1 1412 aa24.31■■□□□ 1.48
KDM3B-201ENST00000314358 CTNNA2P26232 953 aa24.3■■□□□ 1.48
KDM3B-201ENST00000314358 MYD88Q99836 296 aa24.3■■□□□ 1.48
KDM3B-201ENST00000314358 KRT32Q14532 448 aa24.3■■□□□ 1.48
KDM3B-201ENST00000314358 USHBP1Q8N6Y0 703 aa24.3■■□□□ 1.48
KDM3B-201ENST00000314358 SSFA2P28290 1259 aa24.3■■□□□ 1.48
KDM3B-201ENST00000314358 ZSCAN30Q86W11 494 aa24.3■■□□□ 1.48
KDM3B-201ENST00000314358 DRC1Q96MC2 740 aa24.3■■□□□ 1.48
KDM3B-201ENST00000314358 ZNF692Q9BU19 519 aaPredicted RBP24.3■■□□□ 1.48
KDM3B-201ENST00000314358 RTEL1-TNFRSF6BF6WH68 1400 aa24.3■■□□□ 1.48
KDM3B-201ENST00000314358 ZHX1Q9UKY1 873 aaPredicted RBP24.29■■□□□ 1.48
KDM3B-201ENST00000314358 POGZQ7Z3K3 1410 aa24.29■■□□□ 1.48
KDM3B-201ENST00000314358 KIF18AQ8NI77 898 aa24.29■■□□□ 1.48
KDM3B-201ENST00000314358 ADAMTS2O95450 1211 aa24.29■■□□□ 1.48
KDM3B-201ENST00000314358 ANKIB1Q9P2G1 1089 aa24.29■■□□□ 1.48
KDM3B-201ENST00000314358 ZSCAN12O43309 604 aa24.28■■□□□ 1.48
KDM3B-201ENST00000314358 C8orf76Q96K31 380 aa24.28■■□□□ 1.48
KDM3B-201ENST00000314358 TFIP11Q9UBB9 837 aaKnown RBP24.28■■□□□ 1.48
KDM3B-201ENST00000314358 STAMBPO95630 424 aa24.28■■□□□ 1.48
KDM3B-201ENST00000314358 TERF1P54274 439 aa24.28■■□□□ 1.48
KDM3B-201ENST00000314358 VAT1LQ9HCJ6 419 aa24.28■■□□□ 1.48
KDM3B-201ENST00000314358 SMC1AQ14683 1233 aaKnown RBP24.28■■□□□ 1.48
KDM3B-201ENST00000314358 TMC6Q7Z403 805 aa24.28■■□□□ 1.48
KDM3B-201ENST00000314358 RNF216Q9NWF9 866 aaPredicted RBP24.27■■□□□ 1.48
KDM3B-201ENST00000314358 RRP9O43818 475 aaKnown RBP24.27■■□□□ 1.48
KDM3B-201ENST00000314358 TNIP1Q15025 636 aa24.27■■□□□ 1.48
KDM3B-201ENST00000314358 ANO10Q9NW15 660 aa24.27■■□□□ 1.48
KDM3B-201ENST00000314358 NAPBQ9H115 298 aa24.27■■□□□ 1.48
KDM3B-201ENST00000314358 PNISRQ8TF01 805 aaKnown RBP24.27■■□□□ 1.48
KDM3B-201ENST00000314358 TIAM1Q13009 1591 aa24.27■■□□□ 1.48
KDM3B-201ENST00000314358 HOOK3Q86VS8 718 aa24.27■■□□□ 1.48
KDM3B-201ENST00000314358 CCDC183Q5T5S1 534 aa24.26■■□□□ 1.47
KDM3B-201ENST00000314358 TCERG1LQ5VWI1 586 aa24.26■■□□□ 1.47
KDM3B-201ENST00000314358 CNNM3Q8NE01 707 aa24.26■■□□□ 1.47
KDM3B-201ENST00000314358 PUF60Q9UHX1 559 aaKnown RBP24.26■■□□□ 1.47
KDM3B-201ENST00000314358 GBP3Q9H0R5 595 aa24.26■■□□□ 1.47
KDM3B-201ENST00000314358 RBM27Q9P2N5 1060 aaKnown RBP24.26■■□□□ 1.47
KDM3B-201ENST00000314358 SUPT6HQ7KZ85 1726 aaKnown RBP24.26■■□□□ 1.47
KDM3B-201ENST00000314358 IFIT1P09914 478 aaKnown RBP24.26■■□□□ 1.47
KDM3B-201ENST00000314358 F6X3S4 739 aa24.25■■□□□ 1.47
KDM3B-201ENST00000314358 MAATS1Q7Z4T9 603 aa24.25■■□□□ 1.47
KDM3B-201ENST00000314358 RPGRIP1LQ68CZ1 1315 aa24.25■■□□□ 1.47
KDM3B-201ENST00000314358 TRIM21P19474 475 aaKnown RBP24.25■■□□□ 1.47
KDM3B-201ENST00000314358 MX1P20591 662 aa24.25■■□□□ 1.47
KDM3B-201ENST00000314358 MAP9Q49MG5 647 aa24.25■■□□□ 1.47
KDM3B-201ENST00000314358 TMOD2Q9NZR1 351 aa24.25■■□□□ 1.47
KDM3B-201ENST00000314358 NLRP5P59047 1200 aa24.24■■□□□ 1.47
KDM3B-201ENST00000314358 PPP4R3AQ6IN85 833 aa24.24■■□□□ 1.47
KDM3B-201ENST00000314358 PAXIP1Q6ZW49 1069 aaPredicted RBP24.24■■□□□ 1.47
KDM3B-201ENST00000314358 DZIP1Q86YF9 867 aaKnown RBP24.24■■□□□ 1.47
KDM3B-201ENST00000314358 NOP2P46087 812 aaKnown RBP24.24■■□□□ 1.47
KDM3B-201ENST00000314358 U3KPZ7 1027 aaPredicted RBP24.24■■□□□ 1.47
KDM3B-201ENST00000314358 KIAA0586Q9BVV6 1533 aa24.24■■□□□ 1.47
KDM3B-201ENST00000314358 TTLL12Q14166 644 aaPredicted RBP24.24■■□□□ 1.47
KDM3B-201ENST00000314358 MTIF2P46199 727 aaKnown RBP24.24■■□□□ 1.47
KDM3B-201ENST00000314358 HSP90AA4PQ58FG1 418 aa24.23■■□□□ 1.47
KDM3B-201ENST00000314358 GCOM1H8Y6P7 765 aaPredicted RBP24.23■■□□□ 1.47
KDM3B-201ENST00000314358 MYZAPP0CAP1 466 aa24.23■■□□□ 1.47
KDM3B-201ENST00000314358 SLC12A7Q9Y666 1083 aa24.23■■□□□ 1.47
KDM3B-201ENST00000314358 CDK13Q14004 1512 aaKnown RBP24.23■■□□□ 1.47
KDM3B-201ENST00000314358 CTR9Q6PD62 1173 aa24.23■■□□□ 1.47
KDM3B-201ENST00000314358 WDR63Q8IWG1 891 aa24.23■■□□□ 1.47
KDM3B-201ENST00000314358 MYO1BO43795 1136 aa24.23■■□□□ 1.47
KDM3B-201ENST00000314358 PPP4R3BQ5MIZ7 849 aa24.23■■□□□ 1.47
KDM3B-201ENST00000314358 FSIP1Q8NA03 581 aa24.23■■□□□ 1.47
KDM3B-201ENST00000314358 PAFAH1B1P43034 410 aa24.22■■□□□ 1.47
KDM3B-201ENST00000314358 NBPF8Q3BBV2 869 aa24.22■■□□□ 1.47
KDM3B-201ENST00000314358 DUSP27Q5VZP5 1158 aa24.22■■□□□ 1.47
KDM3B-201ENST00000314358 RAB11FIP3O75154 756 aa24.21■■□□□ 1.47
KDM3B-201ENST00000314358 GOLGA8BA8MQT2 603 aa24.21■■□□□ 1.47
KDM3B-201ENST00000314358 VPS36Q86VN1 386 aa24.21■■□□□ 1.47
KDM3B-201ENST00000314358 SSRP1Q08945 709 aaKnown RBP24.21■■□□□ 1.47
KDM3B-201ENST00000314358 FERMT2Q96AC1 680 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms