RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 BABAM1Q9NWV8 329 aa16.41■□□□□ 0.22
DDX54-202ENST00000314045 DIP2CQ9Y2E4 1556 aa16.41■□□□□ 0.22
DDX54-202ENST00000314045 GRM8O00222 908 aa16.41■□□□□ 0.22
DDX54-202ENST00000314045 PHAXQ9H814 394 aaKnown RBP16.41■□□□□ 0.22
DDX54-202ENST00000314045 USP6P35125 1406 aa16.41■□□□□ 0.22
DDX54-202ENST00000314045 PCDH11XQ9BZA7 1347 aa16.41■□□□□ 0.22
DDX54-202ENST00000314045 PCDH11YQ9BZA8 1340 aa16.41■□□□□ 0.22
DDX54-202ENST00000314045 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.41■□□□□ 0.22
DDX54-202ENST00000314045 CYP46A1Q9Y6A2 500 aa16.41■□□□□ 0.22
DDX54-202ENST00000314045 E9PCH4 1651 aa16.4■□□□□ 0.22
DDX54-202ENST00000314045 ZNF790Q6PG37 636 aa16.4■□□□□ 0.22
DDX54-202ENST00000314045 PHF14O94880 888 aa16.4■□□□□ 0.22
DDX54-202ENST00000314045 INO80Q9ULG1 1556 aaPredicted RBP16.4■□□□□ 0.22
DDX54-202ENST00000314045 SOS1Q07889 1333 aaPredicted RBP16.4■□□□□ 0.22
DDX54-202ENST00000314045 IDH1O75874 414 aaKnown RBP16.4■□□□□ 0.22
DDX54-202ENST00000314045 NUCB1Q02818 461 aa16.4■□□□□ 0.22
DDX54-202ENST00000314045 BMP2KLQ5H9B9 411 aa16.4■□□□□ 0.22
DDX54-202ENST00000314045 DDX21Q9NR30 783 aaKnown RBP eCLIP16.4■□□□□ 0.22
DDX54-202ENST00000314045 FOSBP53539 338 aa16.39■□□□□ 0.21
DDX54-202ENST00000314045 NFKBIBQ15653 356 aa16.39■□□□□ 0.21
DDX54-202ENST00000314045 ZSCAN25Q6NSZ9 544 aa16.39■□□□□ 0.21
DDX54-202ENST00000314045 ECHDC1Q9NTX5 307 aa16.39■□□□□ 0.21
DDX54-202ENST00000314045 TRPM1Q7Z4N2 1603 aa16.39■□□□□ 0.21
DDX54-202ENST00000314045 ANKRD18BA2A2Z9 1011 aa16.39■□□□□ 0.21
DDX54-202ENST00000314045 ATP8B2P98198 1209 aa16.39■□□□□ 0.21
DDX54-202ENST00000314045 RHPN1Q8TCX5 695 aa16.39■□□□□ 0.21
DDX54-202ENST00000314045 IFIT1P09914 478 aaKnown RBP16.38■□□□□ 0.21
DDX54-202ENST00000314045 LDHAL6AQ6ZMR3 332 aa16.38■□□□□ 0.21
DDX54-202ENST00000314045 ATP6V1AP38606 617 aa16.38■□□□□ 0.21
DDX54-202ENST00000314045 RRP12Q5JTH9 1297 aaKnown RBP16.38■□□□□ 0.21
DDX54-202ENST00000314045 DHX16O60231 1041 aaKnown RBP16.38■□□□□ 0.21
DDX54-202ENST00000314045 CWF19L2Q2TBE0 894 aaKnown RBP16.38■□□□□ 0.21
DDX54-202ENST00000314045 TSHZ3Q63HK5 1081 aa16.38■□□□□ 0.21
DDX54-202ENST00000314045 ARHGEF25Q86VW2 580 aa16.38■□□□□ 0.21
DDX54-202ENST00000314045 SMARCC1Q92922 1105 aaPredicted RBP16.38■□□□□ 0.21
DDX54-202ENST00000314045 CEP152O94986 1710 aa16.37■□□□□ 0.21
DDX54-202ENST00000314045 MARCH6O60337 910 aa16.37■□□□□ 0.21
DDX54-202ENST00000314045 SART3Q15020 963 aaKnown RBP16.37■□□□□ 0.21
DDX54-202ENST00000314045 PLEKHF1Q96S99 279 aa16.37■□□□□ 0.21
DDX54-202ENST00000314045 IL17REQ8NFR9 667 aa16.37■□□□□ 0.21
DDX54-202ENST00000314045 NACAP1Q9BZK3 213 aa16.37■□□□□ 0.21
DDX54-202ENST00000314045 LRP2BPQ9P2M1 347 aa16.37■□□□□ 0.21
DDX54-202ENST00000314045 ADGRB3O60242 1522 aa16.37■□□□□ 0.21
DDX54-202ENST00000314045 K7ELQ4 463 aaPredicted RBP16.37■□□□□ 0.21
DDX54-202ENST00000314045 BLOC1S2Q6QNY1 142 aa16.37■□□□□ 0.21
DDX54-202ENST00000314045 ABCF2Q9UG63 623 aa16.37■□□□□ 0.21
DDX54-202ENST00000314045 HOXB7P09629 217 aa16.36■□□□□ 0.21
DDX54-202ENST00000314045 LMBR1LQ6UX01 489 aa16.36■□□□□ 0.21
DDX54-202ENST00000314045 ZBTB7BO15156 539 aaPredicted RBP16.36■□□□□ 0.21
DDX54-202ENST00000314045 JAKMIP1Q96N16 626 aaKnown RBP16.36■□□□□ 0.21
DDX54-202ENST00000314045 RAI14Q9P0K7 980 aa16.35■□□□□ 0.21
DDX54-202ENST00000314045 PPP1R1BQ9UD71 204 aaPredicted RBP16.35■□□□□ 0.21
DDX54-202ENST00000314045 ALKQ9UM73 1620 aa16.35■□□□□ 0.21
DDX54-202ENST00000314045 MSNP26038 577 aaKnown RBP16.35■□□□□ 0.21
DDX54-202ENST00000314045 CEP85Q6P2H3 762 aa16.35■□□□□ 0.21
DDX54-202ENST00000314045 SLC52A2Q9HAB3 445 aa16.35■□□□□ 0.21
DDX54-202ENST00000314045 KIDINS220Q9ULH0 1771 aa16.35■□□□□ 0.21
DDX54-202ENST00000314045 GSE1Q14687 1217 aa16.35■□□□□ 0.21
DDX54-202ENST00000314045 AK7Q96M32 723 aa16.35■□□□□ 0.21
DDX54-202ENST00000314045 TBC1D9Q6ZT07 1266 aa16.34■□□□□ 0.21
DDX54-202ENST00000314045 UPF3BQ9BZI7 483 aaKnown RBP16.34■□□□□ 0.21
DDX54-202ENST00000314045 DCTPP1Q9H773 170 aa16.34■□□□□ 0.21
DDX54-202ENST00000314045 CTNNA3Q9UI47 895 aa16.34■□□□□ 0.21
DDX54-202ENST00000314045 SMC5Q8IY18 1101 aa16.34■□□□□ 0.21
DDX54-202ENST00000314045 PPRC1Q5VV67 1664 aaKnown RBP16.34■□□□□ 0.21
DDX54-202ENST00000314045 PDCP20941 246 aa16.34■□□□□ 0.21
DDX54-202ENST00000314045 SAFBQ15424 915 aaKnown RBP eCLIP16.34■□□□□ 0.21
DDX54-202ENST00000314045 BICD2Q8TD16 824 aa16.34■□□□□ 0.21
DDX54-202ENST00000314045 RNF123Q5XPI4 1314 aa16.34■□□□□ 0.21
DDX54-202ENST00000314045 TTC22Q5TAA0 569 aa16.33■□□□□ 0.21
DDX54-202ENST00000314045 ZNF335Q9H4Z2 1342 aaPredicted RBP16.33■□□□□ 0.21
DDX54-202ENST00000314045 ZNF496Q96IT1 587 aaPredicted RBP16.33■□□□□ 0.2
DDX54-202ENST00000314045 CDCA7Q9BWT1 371 aaPredicted RBP16.33■□□□□ 0.2
DDX54-202ENST00000314045 CHAF1AQ13111 956 aaPredicted RBP16.33■□□□□ 0.2
DDX54-202ENST00000314045 ANKRD1Q15327 319 aa16.33■□□□□ 0.2
DDX54-202ENST00000314045 MTMR7Q9Y216 660 aa16.33■□□□□ 0.2
DDX54-202ENST00000314045 STK11IPQ8N1F8 1099 aa16.32■□□□□ 0.2
DDX54-202ENST00000314045 ABCA6Q8N139 1617 aa16.32■□□□□ 0.2
DDX54-202ENST00000314045 BCORL1Q5H9F3 1711 aa16.32■□□□□ 0.2
DDX54-202ENST00000314045 PDE1AP54750 535 aa16.32■□□□□ 0.2
DDX54-202ENST00000314045 EIF4A1P60842 406 aaKnown RBP16.32■□□□□ 0.2
DDX54-202ENST00000314045 VPS53Q5VIR6 699 aa16.32■□□□□ 0.2
DDX54-202ENST00000314045 C16orf71Q8IYS4 520 aaPredicted RBP16.32■□□□□ 0.2
DDX54-202ENST00000314045 MADDQ8WXG6 1647 aa16.32■□□□□ 0.2
DDX54-202ENST00000314045 SLC3A2P08195 630 aaKnown RBP16.32■□□□□ 0.2
DDX54-202ENST00000314045 KRT32Q14532 448 aa16.32■□□□□ 0.2
DDX54-202ENST00000314045 IGSF1Q8N6C5 1336 aa16.32■□□□□ 0.2
DDX54-202ENST00000314045 RFC4P35249 363 aa16.31■□□□□ 0.2
DDX54-202ENST00000314045 TPM4P67936 248 aa16.31■□□□□ 0.2
DDX54-202ENST00000314045 STK3Q13188 491 aa16.31■□□□□ 0.2
DDX54-202ENST00000314045 CAVIN4Q5BKX8 364 aa16.31■□□□□ 0.2
DDX54-202ENST00000314045 PA2G4Q9UQ80 394 aaKnown RBP16.31■□□□□ 0.2
DDX54-202ENST00000314045 GLI2P10070 1586 aa16.31■□□□□ 0.2
DDX54-202ENST00000314045 EVI5LQ96CN4 794 aa16.31■□□□□ 0.2
DDX54-202ENST00000314045 SNRKQ9NRH2 765 aa16.31■□□□□ 0.2
DDX54-202ENST00000314045 PDRG1Q9NUG6 133 aa16.31■□□□□ 0.2
DDX54-202ENST00000314045 AGLP35573 1532 aa16.31■□□□□ 0.2
DDX54-202ENST00000314045 PRPF40BQ6NWY9 871 aaKnown RBP16.31■□□□□ 0.2
DDX54-202ENST00000314045 DZIP3Q86Y13 1208 aaKnown RBP16.31■□□□□ 0.2
DDX54-202ENST00000314045 AIDAQ96BJ3 306 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms