RNA–Protein interactions for RNA: ENST00000312123.13

GAPVD1-203, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GAPVD1, Length 4,320 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-203ENST00000312123 KLHL40Q2TBA0 621 aa8.3□□□□□ -1.08
GAPVD1-203ENST00000312123 C8orf76Q96K31 380 aa8.3□□□□□ -1.08
GAPVD1-203ENST00000312123 PTPRCP08575 1304 aa8.29□□□□□ -1.08
GAPVD1-203ENST00000312123 SLC3A2P08195 630 aaKnown RBP8.29□□□□□ -1.08
GAPVD1-203ENST00000312123 DHX8Q14562 1220 aaKnown RBP8.29□□□□□ -1.08
GAPVD1-203ENST00000312123 SH2B1Q9NRF2 756 aaPredicted RBP8.29□□□□□ -1.08
GAPVD1-203ENST00000312123 SFPQP23246 707 aaKnown RBP eCLIP8.29□□□□□ -1.08
GAPVD1-203ENST00000312123 CHRNA2Q15822 529 aa8.29□□□□□ -1.08
GAPVD1-203ENST00000312123 DDX46Q7L014 1031 aaKnown RBP8.29□□□□□ -1.08
GAPVD1-203ENST00000312123 PDCL2Q8N4E4 241 aa8.29□□□□□ -1.08
GAPVD1-203ENST00000312123 AK7Q96M32 723 aa8.29□□□□□ -1.08
GAPVD1-203ENST00000312123 RRP9O43818 475 aaKnown RBP8.29□□□□□ -1.08
GAPVD1-203ENST00000312123 VAMP4O75379 141 aa8.29□□□□□ -1.08
GAPVD1-203ENST00000312123 ADCY5O95622 1261 aa8.29□□□□□ -1.08
GAPVD1-203ENST00000312123 CBX1P83916 185 aa8.29□□□□□ -1.08
GAPVD1-203ENST00000312123 SLC39A6Q13433 755 aa8.29□□□□□ -1.08
GAPVD1-203ENST00000312123 ZSCAN25Q6NSZ9 544 aa8.29□□□□□ -1.08
GAPVD1-203ENST00000312123 CCAR1Q8IX12 1150 aaKnown RBP8.29□□□□□ -1.08
GAPVD1-203ENST00000312123 CCDC144CPQ8IYA2 1237 aa8.29□□□□□ -1.08
GAPVD1-203ENST00000312123 ZGPATQ8N5A5 531 aaKnown RBP8.29□□□□□ -1.08
GAPVD1-203ENST00000312123 ANKRD44Q8N8A2 993 aa8.29□□□□□ -1.08
GAPVD1-203ENST00000312123 FBXO3Q9UK99 471 aa8.29□□□□□ -1.08
GAPVD1-203ENST00000312123 CDKL5O76039 1030 aa8.28□□□□□ -1.08
GAPVD1-203ENST00000312123 POLR3DP05423 398 aaPredicted RBP8.28□□□□□ -1.08
GAPVD1-203ENST00000312123 SETQ01105 290 aaPredicted RBP8.28□□□□□ -1.08
GAPVD1-203ENST00000312123 TANGO6Q9C0B7 1094 aa8.28□□□□□ -1.08
GAPVD1-203ENST00000312123 ZNHIT6Q9NWK9 470 aaKnown RBP8.28□□□□□ -1.08
GAPVD1-203ENST00000312123 DHX29Q7Z478 1369 aaKnown RBP8.28□□□□□ -1.08
GAPVD1-203ENST00000312123 ZNF165P49910 485 aa8.28□□□□□ -1.08
GAPVD1-203ENST00000312123 PTPN14Q15678 1187 aa8.28□□□□□ -1.08
GAPVD1-203ENST00000312123 FSIP1Q8NA03 581 aa8.28□□□□□ -1.08
GAPVD1-203ENST00000312123 NAPBQ9H115 298 aa8.28□□□□□ -1.08
GAPVD1-203ENST00000312123 ZSCAN23Q3MJ62 389 aa8.28□□□□□ -1.08
GAPVD1-203ENST00000312123 MRPL50Q8N5N7 158 aaKnown RBP8.28□□□□□ -1.08
GAPVD1-203ENST00000312123 UBXN4Q92575 508 aa8.28□□□□□ -1.08
GAPVD1-203ENST00000312123 DEF6Q9H4E7 631 aa8.28□□□□□ -1.08
GAPVD1-203ENST00000312123 CHPF2Q9P2E5 772 aa8.28□□□□□ -1.08
GAPVD1-203ENST00000312123 PA2G4Q9UQ80 394 aaKnown RBP8.28□□□□□ -1.08
GAPVD1-203ENST00000312123 IL16Q14005 1332 aa8.28□□□□□ -1.08
GAPVD1-203ENST00000312123 PRAG1Q86YV5 1406 aa8.28□□□□□ -1.08
GAPVD1-203ENST00000312123 ERICH4A6NGS2 130 aa8.27□□□□□ -1.08
GAPVD1-203ENST00000312123 BRF1Q92994 677 aa8.27□□□□□ -1.08
GAPVD1-203ENST00000312123 ZBTB40Q9NUA8 1239 aa8.27□□□□□ -1.08
GAPVD1-203ENST00000312123 GOLGA8BA8MQT2 603 aa8.27□□□□□ -1.09
GAPVD1-203ENST00000312123 STARD3NLO95772 234 aa8.27□□□□□ -1.09
GAPVD1-203ENST00000312123 IFIT5Q13325 482 aaKnown RBP8.27□□□□□ -1.09
GAPVD1-203ENST00000312123 AMOTQ4VCS5 1084 aa8.27□□□□□ -1.09
GAPVD1-203ENST00000312123 NOM1Q5C9Z4 860 aaKnown RBP8.27□□□□□ -1.09
GAPVD1-203ENST00000312123 TMX1Q9H3N1 280 aa8.27□□□□□ -1.09
GAPVD1-203ENST00000312123 CLIP2Q9UDT6 1046 aa8.27□□□□□ -1.09
GAPVD1-203ENST00000312123 H0YHG0 523 aa8.27□□□□□ -1.09
GAPVD1-203ENST00000312123 URI1O94763 535 aaPredicted RBP8.27□□□□□ -1.09
GAPVD1-203ENST00000312123 MAPK8IP2Q13387 824 aaPredicted RBP8.27□□□□□ -1.09
GAPVD1-203ENST00000312123 OTUD7AQ8TE49 926 aaPredicted RBP8.27□□□□□ -1.09
GAPVD1-203ENST00000312123 CPLX3Q8WVH0 158 aa8.27□□□□□ -1.09
GAPVD1-203ENST00000312123 EVI5LQ96CN4 794 aa8.27□□□□□ -1.09
GAPVD1-203ENST00000312123 CNPY2Q9Y2B0 182 aa8.27□□□□□ -1.09
GAPVD1-203ENST00000312123 ZNF213O14771 459 aa8.27□□□□□ -1.09
GAPVD1-203ENST00000312123 CCP110O43303 1012 aa8.27□□□□□ -1.09
GAPVD1-203ENST00000312123 EIF4A2Q14240 407 aaKnown RBP8.27□□□□□ -1.09
GAPVD1-203ENST00000312123 SMC5Q8IY18 1101 aa8.27□□□□□ -1.09
GAPVD1-203ENST00000312123 ARHGAP45Q92619 1136 aa8.27□□□□□ -1.09
GAPVD1-203ENST00000312123 ANO10Q9NW15 660 aa8.27□□□□□ -1.09
GAPVD1-203ENST00000312123 HYPKQ9NX55 129 aa8.27□□□□□ -1.09
GAPVD1-203ENST00000312123 TRMT112Q9UI30 125 aaKnown RBP8.27□□□□□ -1.09
GAPVD1-203ENST00000312123 NOL7Q9UMY1 257 aaKnown RBP8.27□□□□□ -1.09
GAPVD1-203ENST00000312123 ATP10BO94823 1461 aa8.26□□□□□ -1.09
GAPVD1-203ENST00000312123 RALGAPBQ86X10 1494 aa8.26□□□□□ -1.09
GAPVD1-203ENST00000312123 USP5P45974 858 aa8.26□□□□□ -1.09
GAPVD1-203ENST00000312123 FAM193AP78312 1265 aa8.26□□□□□ -1.09
GAPVD1-203ENST00000312123 ARHGAP29Q52LW3 1261 aa8.26□□□□□ -1.09
GAPVD1-203ENST00000312123 SOGA3Q5TF21 947 aa8.26□□□□□ -1.09
GAPVD1-203ENST00000312123 MICU3Q86XE3 530 aa8.26□□□□□ -1.09
GAPVD1-203ENST00000312123 PKNOX2Q96KN3 472 aa8.26□□□□□ -1.09
GAPVD1-203ENST00000312123 ESYT1Q9BSJ8 1104 aa8.26□□□□□ -1.09
GAPVD1-203ENST00000312123 USP16Q9Y5T5 823 aa8.26□□□□□ -1.09
GAPVD1-203ENST00000312123 RANBP6O60518 1105 aaKnown RBP8.26□□□□□ -1.09
GAPVD1-203ENST00000312123 TNNT1P13805 278 aa8.26□□□□□ -1.09
GAPVD1-203ENST00000312123 IGHMBP2P38935 993 aaKnown RBP8.26□□□□□ -1.09
GAPVD1-203ENST00000312123 PRIM1P49642 420 aaKnown RBP8.26□□□□□ -1.09
GAPVD1-203ENST00000312123 STIM1Q13586 685 aa8.26□□□□□ -1.09
GAPVD1-203ENST00000312123 HSP90AA4PQ58FG1 418 aa8.26□□□□□ -1.09
GAPVD1-203ENST00000312123 ODF2Q5BJF6 829 aa8.26□□□□□ -1.09
GAPVD1-203ENST00000312123 LDHAL6AQ6ZMR3 332 aa8.26□□□□□ -1.09
GAPVD1-203ENST00000312123 KIF14Q15058 1648 aa8.26□□□□□ -1.09
GAPVD1-203ENST00000312123 TTC21BQ7Z4L5 1316 aa8.26□□□□□ -1.09
GAPVD1-203ENST00000312123 CENPHQ9H3R5 247 aa8.26□□□□□ -1.09
GAPVD1-203ENST00000312123 TTC12Q9H892 705 aaPredicted RBP8.26□□□□□ -1.09
GAPVD1-203ENST00000312123 TMOD3Q9NYL9 352 aa8.26□□□□□ -1.09
GAPVD1-203ENST00000312123 ORC3Q9UBD5 711 aaPredicted RBP8.26□□□□□ -1.09
GAPVD1-203ENST00000312123 FANCAO15360 1455 aa8.26□□□□□ -1.09
GAPVD1-203ENST00000312123 IFIT3O14879 490 aaKnown RBP8.25□□□□□ -1.09
GAPVD1-203ENST00000312123 CBFA2T2O43439 604 aa8.25□□□□□ -1.09
GAPVD1-203ENST00000312123 CPA1P15085 419 aa8.25□□□□□ -1.09
GAPVD1-203ENST00000312123 EIF5P55010 431 aaKnown RBP8.25□□□□□ -1.09
GAPVD1-203ENST00000312123 ZSCAN29Q8IWY8 852 aaPredicted RBP8.25□□□□□ -1.09
GAPVD1-203ENST00000312123 NEK1Q96PY6 1258 aa8.25□□□□□ -1.09
GAPVD1-203ENST00000312123 TSPYL1Q9H0U9 437 aa8.25□□□□□ -1.09
GAPVD1-203ENST00000312123 DACH1Q9UI36 760 aa8.25□□□□□ -1.09
GAPVD1-203ENST00000312123 ANKRD36BQ8N2N9 1353 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms